RNA–Protein interactions for RNA: ENST00000558321.5

CDC42BPB-202, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 3

Gene CDC42BPB, Length 528 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-202ENST00000558321 KRTAP5-3Q6L8H2 238 aa4.5□□□□□ -1.69
CDC42BPB-202ENST00000558321 DSTQ03001 7570 aaKnown RBP4.49□□□□□ -1.69
CDC42BPB-202ENST00000558321 ATP5EP56381 51 aaPredicted RBP4.48□□□□□ -1.69
CDC42BPB-202ENST00000558321 TNP1P09430 55 aa4.47□□□□□ -1.69
CDC42BPB-202ENST00000558321 MT1GP13640 62 aa4.47□□□□□ -1.69
CDC42BPB-202ENST00000558321 PP632Q6XCG6 107 aa4.47□□□□□ -1.69
CDC42BPB-202ENST00000558321 C10orf95Q9H7T3 257 aa4.44□□□□□ -1.7
CDC42BPB-202ENST00000558321 LCE3AQ5TA76 89 aa4.42□□□□□ -1.7
CDC42BPB-202ENST00000558321 LINC01558Q9Y6Z2 57 aa4.41□□□□□ -1.7
CDC42BPB-202ENST00000558321 MT1LQ93083 61 aa4.39□□□□□ -1.71
CDC42BPB-202ENST00000558321 MT1MQ8N339 61 aa4.38□□□□□ -1.71
CDC42BPB-202ENST00000558321 KRTAP23-1A1A580 65 aa4.34□□□□□ -1.71
CDC42BPB-202ENST00000558321 UQCR11O14957 56 aa4.34□□□□□ -1.71
CDC42BPB-202ENST00000558321 TMEM258P61165 79 aa4.34□□□□□ -1.71
CDC42BPB-202ENST00000558321 KRTAP15-1Q3LI76 137 aa4.29□□□□□ -1.72
CDC42BPB-202ENST00000558321 KRTAP4-3Q9BYR4 195 aa4.29□□□□□ -1.72
CDC42BPB-202ENST00000558321 MT4P47944 62 aa4.27□□□□□ -1.73
CDC42BPB-202ENST00000558321 GPR98Q8WXG9 6306 aa4.26□□□□□ -1.73
CDC42BPB-202ENST00000558321 KRTAP12-3P60328 96 aa4.26□□□□□ -1.73
CDC42BPB-202ENST00000558321 MIR22HGQ0VDD5 57 aa4.25□□□□□ -1.73
CDC42BPB-202ENST00000558321 K7ERS5 55 aa4.21□□□□□ -1.74
CDC42BPB-202ENST00000558321 KRTAP25-1Q3LHN0 102 aa4.18□□□□□ -1.74
CDC42BPB-202ENST00000558321 KRTAP5-4Q6L8H1 288 aa4.17□□□□□ -1.74
CDC42BPB-202ENST00000558321 HMCN1Q96RW7 5635 aa4.16□□□□□ -1.74
CDC42BPB-202ENST00000558321 PSPHP1O15172 72 aa4.15□□□□□ -1.75
CDC42BPB-202ENST00000558321 V9GYY9 64 aa4.15□□□□□ -1.75
CDC42BPB-202ENST00000558321 Q1T7F1 81 aa4.09□□□□□ -1.75
CDC42BPB-202ENST00000558321 AHNAK2Q8IVF2 5795 aa4.02□□□□□ -1.77
CDC42BPB-202ENST00000558321 A6NED7 52 aa4.02□□□□□ -1.77
CDC42BPB-202ENST00000558321 KRTAP5-5Q701N2 237 aaPredicted RBP3.98□□□□□ -1.77
CDC42BPB-202ENST00000558321 KRTAP12-4P60329 112 aa3.97□□□□□ -1.77
CDC42BPB-202ENST00000558321 KRTAP5-10Q6L8G5 202 aa3.97□□□□□ -1.77
CDC42BPB-202ENST00000558321 KRTAP20-2Q3LI61 65 aa3.96□□□□□ -1.78
CDC42BPB-202ENST00000558321 CDC42SE1Q9NRR8 79 aa3.95□□□□□ -1.78
CDC42BPB-202ENST00000558321 SPRR5A0A1B0GTR4 108 aa3.94□□□□□ -1.78
CDC42BPB-202ENST00000558321 LCE3CQ5T5A8 94 aa3.92□□□□□ -1.78
CDC42BPB-202ENST00000558321 ROMO1P60602 79 aa3.88□□□□□ -1.79
CDC42BPB-202ENST00000558321 RPS28P62857 69 aaKnown RBP3.85□□□□□ -1.79
CDC42BPB-202ENST00000558321 KRTAP5-7Q6L8G8 165 aa3.83□□□□□ -1.8
CDC42BPB-202ENST00000558321 SYNE1Q8NF91 8797 aaKnown RBP3.77□□□□□ -1.81
CDC42BPB-202ENST00000558321 MT1AP04731 61 aa3.73□□□□□ -1.81
CDC42BPB-202ENST00000558321 PCP4P48539 62 aa3.73□□□□□ -1.81
CDC42BPB-202ENST00000558321 KRTAP6-1Q3LI64 71 aa3.72□□□□□ -1.81
CDC42BPB-202ENST00000558321 KRTAP9-6A8MVA2 160 aa3.66□□□□□ -1.82
CDC42BPB-202ENST00000558321 KRTAP5-2Q701N4 177 aa3.64□□□□□ -1.83
CDC42BPB-202ENST00000558321 KRTAP6-2Q3LI66 62 aa3.57□□□□□ -1.84
CDC42BPB-202ENST00000558321 KRTAP5-8O75690 187 aa3.48□□□□□ -1.85
CDC42BPB-202ENST00000558321 MT3P25713 68 aa3.45□□□□□ -1.86
CDC42BPB-202ENST00000558321 OBSCNQ5VST9 7968 aa3.41□□□□□ -1.86
CDC42BPB-202ENST00000558321 BRK1Q8WUW1 75 aa3.39□□□□□ -1.87
CDC42BPB-202ENST00000558321 KRTAP5-11Q6L8G4 156 aa3.37□□□□□ -1.87
CDC42BPB-202ENST00000558321 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.37□□□□□ -1.87
CDC42BPB-202ENST00000558321 AHNAKQ09666 5890 aaKnown RBP3.34□□□□□ -1.88
CDC42BPB-202ENST00000558321 MUC5ACP98088 5654 aa3.34□□□□□ -1.88
CDC42BPB-202ENST00000558321 SVIPQ8NHG7 77 aa3.32□□□□□ -1.88
CDC42BPB-202ENST00000558321 MUC5BQ9HC84 5762 aaPredicted RBP3.31□□□□□ -1.88
CDC42BPB-202ENST00000558321 LCE1EQ5T753 118 aa3.28□□□□□ -1.88
CDC42BPB-202ENST00000558321 KRTAP5-1Q6L8H4 278 aa3.28□□□□□ -1.88
CDC42BPB-202ENST00000558321 PMAIP1Q13794 54 aa3.19□□□□□ -1.9
CDC42BPB-202ENST00000558321 PRAC1Q96KF2 57 aa3.07□□□□□ -1.92
CDC42BPB-202ENST00000558321 LCE1BQ5T7P3 118 aa3.01□□□□□ -1.93
CDC42BPB-202ENST00000558321 A0A0A0MQY5 61 aa2.98□□□□□ -1.93
CDC42BPB-202ENST00000558321 LCE1CQ5T751 118 aa2.92□□□□□ -1.94
CDC42BPB-202ENST00000558321 LCE1FQ5T754 118 aa2.88□□□□□ -1.95
CDC42BPB-202ENST00000558321 PRO0628Q9UI54 55 aa2.86□□□□□ -1.95
CDC42BPB-202ENST00000558321 LCE3DQ9BYE3 92 aa2.83□□□□□ -1.96
CDC42BPB-202ENST00000558321 KRTAP4-4Q9BYR3 166 aa2.8□□□□□ -1.96
CDC42BPB-202ENST00000558321 KTN1-AS1Q86SY8 53 aa2.75□□□□□ -1.97
CDC42BPB-202ENST00000558321 LUZP6Q538Z0 58 aa2.66□□□□□ -1.98
CDC42BPB-202ENST00000558321 LCE3EQ5T5B0 92 aa2.66□□□□□ -1.98
CDC42BPB-202ENST00000558321 NDUFAF8A1L188 74 aa2.65□□□□□ -1.99
CDC42BPB-202ENST00000558321 KRTAP21-2Q3LI59 83 aa2.43□□□□□ -2.02
CDC42BPB-202ENST00000558321 PHGR1C9JFL3 82 aa2.35□□□□□ -2.03
CDC42BPB-202ENST00000558321 MUC19Q7Z5P9 8384 aa2.07□□□□□ -2.08
CDC42BPB-202ENST00000558321 PRM1P04553 51 aa1.97□□□□□ -2.09
CDC42BPB-202ENST00000558321 KRTAP21-1Q3LI58 79 aa1.79□□□□□ -2.12
CDC42BPB-202ENST00000558321 INE1O15225 51 aa1.6□□□□□ -2.15
CDC42BPB-202ENST00000558321 MUC16Q8WXI7 14507 aa1.53□□□□□ -2.16
Retrieved 78 of 20,778 RNA–protein pairs in 112.7 ms