RNA–Protein interactions for RNA: ENST00000558298.5

RTF1-205, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 5

Gene RTF1, Length 327 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-205ENST00000558298 LCE1DQ5T752 114 aa3.39□□□□□ -1.87
RTF1-205ENST00000558298 KRTAP4-9Q9BYQ8 210 aa3.39□□□□□ -1.87
RTF1-205ENST00000558298 KRTAP10-5P60370 271 aa3.38□□□□□ -1.87
RTF1-205ENST00000558298 KRTAP6-3Q3LI67 103 aa3.36□□□□□ -1.87
RTF1-205ENST00000558298 MUC12Q9UKN1 5478 aa3.28□□□□□ -1.88
RTF1-205ENST00000558298 KRTAP5-9P26371 169 aa3.27□□□□□ -1.89
RTF1-205ENST00000558298 MT1XP80297 61 aa3.27□□□□□ -1.89
RTF1-205ENST00000558298 NEBP20929 6669 aa3.24□□□□□ -1.89
RTF1-205ENST00000558298 KMT2DO14686 5537 aa3.24□□□□□ -1.89
RTF1-205ENST00000558298 KRTAP8-1Q8IUC2 63 aa3.21□□□□□ -1.9
RTF1-205ENST00000558298 KRTAP4-11Q9BYQ6 195 aa3.2□□□□□ -1.9
RTF1-205ENST00000558298 MDN1Q9NU22 5596 aa3.19□□□□□ -1.9
RTF1-205ENST00000558298 KRTAP10-12P60413 245 aa3.14□□□□□ -1.91
RTF1-205ENST00000558298 KRTAP19-4Q3LI73 84 aa3.11□□□□□ -1.91
RTF1-205ENST00000558298 LCE3AQ5TA76 89 aa3.11□□□□□ -1.91
RTF1-205ENST00000558298 KRTAP10-7P60409 375 aaPredicted RBP3.09□□□□□ -1.91
RTF1-205ENST00000558298 KRTAP12-3P60328 96 aa3.07□□□□□ -1.92
RTF1-205ENST00000558298 KRTAP20-1Q3LI63 56 aa3.07□□□□□ -1.92
RTF1-205ENST00000558298 SPRR2FQ96RM1 72 aa3.07□□□□□ -1.92
RTF1-205ENST00000558298 LCE1AQ5T7P2 110 aa3.05□□□□□ -1.92
RTF1-205ENST00000558298 SPRR2EP22531 72 aa3.02□□□□□ -1.93
RTF1-205ENST00000558298 SPRR2BP35325 72 aa3.02□□□□□ -1.93
RTF1-205ENST00000558298 SPRR2AP35326 72 aa3.02□□□□□ -1.93
RTF1-205ENST00000558298 KRTAP2-3P0C7H8 128 aa3□□□□□ -1.93
RTF1-205ENST00000558298 KRTAP2-4Q9BYR9 128 aa3□□□□□ -1.93
RTF1-205ENST00000558298 KRTAP19-7Q3SYF9 63 aa2.94□□□□□ -1.94
RTF1-205ENST00000558298 SPRR2DP22532 72 aa2.92□□□□□ -1.94
RTF1-205ENST00000558298 LCE3CQ5T5A8 94 aa2.91□□□□□ -1.94
RTF1-205ENST00000558298 LCE4AQ5TA78 99 aa2.91□□□□□ -1.94
RTF1-205ENST00000558298 KRTAP2-2Q9BYT5 123 aa2.91□□□□□ -1.94
RTF1-205ENST00000558298 KRTAP2-1Q9BYU5 128 aa2.91□□□□□ -1.94
RTF1-205ENST00000558298 MT1EP04732 61 aa2.9□□□□□ -1.95
RTF1-205ENST00000558298 LCE5AQ5TCM9 118 aa2.88□□□□□ -1.95
RTF1-205ENST00000558298 KRTAP19-3Q7Z4W3 81 aa2.86□□□□□ -1.95
RTF1-205ENST00000558298 KRTAP19-5Q3LI72 72 aa2.84□□□□□ -1.95
RTF1-205ENST00000558298 MT1GP13640 62 aa2.82□□□□□ -1.96
RTF1-205ENST00000558298 MT1LQ93083 61 aa2.79□□□□□ -1.96
RTF1-205ENST00000558298 DSTQ03001 7570 aaKnown RBP2.78□□□□□ -1.96
RTF1-205ENST00000558298 MT1MQ8N339 61 aa2.75□□□□□ -1.97
RTF1-205ENST00000558298 KRTAP5-4Q6L8H1 288 aa2.64□□□□□ -1.99
RTF1-205ENST00000558298 KRTAP4-3Q9BYR4 195 aa2.64□□□□□ -1.99
RTF1-205ENST00000558298 HMCN1Q96RW7 5635 aa2.64□□□□□ -1.99
RTF1-205ENST00000558298 KRTAP9-6A8MVA2 160 aa2.6□□□□□ -1.99
RTF1-205ENST00000558298 GPR98Q8WXG9 6306 aa2.58□□□□□ -2
RTF1-205ENST00000558298 KRTAP5-5Q701N2 237 aaPredicted RBP2.56□□□□□ -2
RTF1-205ENST00000558298 MT4P47944 62 aa2.54□□□□□ -2
RTF1-205ENST00000558298 KRTAP12-4P60329 112 aa2.53□□□□□ -2
RTF1-205ENST00000558298 AHNAK2Q8IVF2 5795 aa2.51□□□□□ -2.01
RTF1-205ENST00000558298 SYNE1Q8NF91 8797 aaKnown RBP2.49□□□□□ -2.01
RTF1-205ENST00000558298 MT1AP04731 61 aa2.47□□□□□ -2.01
RTF1-205ENST00000558298 KRTAP5-10Q6L8G5 202 aa2.46□□□□□ -2.02
RTF1-205ENST00000558298 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.46□□□□□ -2.02
RTF1-205ENST00000558298 KRTAP20-2Q3LI61 65 aa2.45□□□□□ -2.02
RTF1-205ENST00000558298 KRTAP5-7Q6L8G8 165 aa2.36□□□□□ -2.03
RTF1-205ENST00000558298 LCE3EQ5T5B0 92 aa2.33□□□□□ -2.04
RTF1-205ENST00000558298 KRTAP6-1Q3LI64 71 aa2.32□□□□□ -2.04
RTF1-205ENST00000558298 KRTAP5-2Q701N4 177 aa2.32□□□□□ -2.04
RTF1-205ENST00000558298 LCE3DQ9BYE3 92 aa2.32□□□□□ -2.04
RTF1-205ENST00000558298 PRM1P04553 51 aa2.23□□□□□ -2.05
RTF1-205ENST00000558298 KRTAP5-11Q6L8G4 156 aa2.22□□□□□ -2.05
RTF1-205ENST00000558298 KRTAP6-2Q3LI66 62 aa2.19□□□□□ -2.06
RTF1-205ENST00000558298 KRTAP5-8O75690 187 aa2.17□□□□□ -2.06
RTF1-205ENST00000558298 MT3P25713 68 aa2.17□□□□□ -2.06
RTF1-205ENST00000558298 OBSCNQ5VST9 7968 aa2.12□□□□□ -2.07
RTF1-205ENST00000558298 KRTAP5-1Q6L8H4 278 aa2.09□□□□□ -2.07
RTF1-205ENST00000558298 MUC5BQ9HC84 5762 aaPredicted RBP2.09□□□□□ -2.08
RTF1-205ENST00000558298 KRTAP4-4Q9BYR3 166 aa2.08□□□□□ -2.08
RTF1-205ENST00000558298 MUC5ACP98088 5654 aa2.08□□□□□ -2.08
RTF1-205ENST00000558298 AHNAKQ09666 5890 aaKnown RBP2.06□□□□□ -2.08
RTF1-205ENST00000558298 LCE1EQ5T753 118 aa2.03□□□□□ -2.08
RTF1-205ENST00000558298 LCE1CQ5T751 118 aa1.87□□□□□ -2.11
RTF1-205ENST00000558298 LCE1BQ5T7P3 118 aa1.87□□□□□ -2.11
RTF1-205ENST00000558298 LCE1FQ5T754 118 aa1.64□□□□□ -2.15
RTF1-205ENST00000558298 KRTAP21-2Q3LI59 83 aa1.56□□□□□ -2.16
RTF1-205ENST00000558298 KRTAP21-1Q3LI58 79 aa1.52□□□□□ -2.17
RTF1-205ENST00000558298 PHGR1C9JFL3 82 aa1.44□□□□□ -2.18
RTF1-205ENST00000558298 MUC19Q7Z5P9 8384 aa1.29□□□□□ -2.2
RTF1-205ENST00000558298 MUC16Q8WXI7 14507 aa0.98□□□□□ -2.25
Retrieved 78 of 20,778 RNA–protein pairs in 101.8 ms