RNA–Protein interactions for RNA: ENST00000558234.1

RORA-207, Transcript of RAR related orphan receptor A, humanhuman

TSL 1 (best)

Gene RORA, Length 3,910 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RORA-207ENST00000558234 SPRR2FQ96RM1 72 aa4.23□□□□□ -1.73
RORA-207ENST00000558234 KRTAP19-5Q3LI72 72 aa4.22□□□□□ -1.73
RORA-207ENST00000558234 KRTAP12-3P60328 96 aa4.18□□□□□ -1.74
RORA-207ENST00000558234 LCE5AQ5TCM9 118 aa4.17□□□□□ -1.74
RORA-207ENST00000558234 SPRR5A0A1B0GTR4 108 aa4.15□□□□□ -1.74
RORA-207ENST00000558234 KRTAP15-1Q3LI76 137 aa4.15□□□□□ -1.75
RORA-207ENST00000558234 A0A0A0MQY5 61 aa4.12□□□□□ -1.75
RORA-207ENST00000558234 MT1LQ93083 61 aa4.12□□□□□ -1.75
RORA-207ENST00000558234 KRTAP19-3Q7Z4W3 81 aa4.12□□□□□ -1.75
RORA-207ENST00000558234 SPRR2EP22531 72 aa4.11□□□□□ -1.75
RORA-207ENST00000558234 SPRR2BP35325 72 aa4.11□□□□□ -1.75
RORA-207ENST00000558234 SPRR2AP35326 72 aa4.11□□□□□ -1.75
RORA-207ENST00000558234 KRTAP19-4Q3LI73 84 aa4.03□□□□□ -1.76
RORA-207ENST00000558234 MT1GP13640 62 aa4.03□□□□□ -1.76
RORA-207ENST00000558234 MT1MQ8N339 61 aa4.01□□□□□ -1.77
RORA-207ENST00000558234 LCE3CQ5T5A8 94 aa3.98□□□□□ -1.77
RORA-207ENST00000558234 SPRR2DP22532 72 aa3.97□□□□□ -1.77
RORA-207ENST00000558234 KRTAP2-3P0C7H8 128 aa3.96□□□□□ -1.78
RORA-207ENST00000558234 KRTAP2-4Q9BYR9 128 aa3.96□□□□□ -1.78
RORA-207ENST00000558234 KRTAP20-1Q3LI63 56 aa3.94□□□□□ -1.78
RORA-207ENST00000558234 KRTAP4-7Q9BYR0 210 aa3.91□□□□□ -1.78
RORA-207ENST00000558234 KRTAP9-6A8MVA2 160 aa3.9□□□□□ -1.79
RORA-207ENST00000558234 LCE3BQ5TA77 95 aa3.88□□□□□ -1.79
RORA-207ENST00000558234 KRTAP4-3Q9BYR4 195 aa3.88□□□□□ -1.79
RORA-207ENST00000558234 KRTAP2-2Q9BYT5 123 aa3.85□□□□□ -1.79
RORA-207ENST00000558234 KRTAP2-1Q9BYU5 128 aa3.85□□□□□ -1.79
RORA-207ENST00000558234 KRTAP5-5Q701N2 237 aaPredicted RBP3.82□□□□□ -1.8
RORA-207ENST00000558234 KRTAP5-4Q6L8H1 288 aa3.78□□□□□ -1.8
RORA-207ENST00000558234 DSTQ03001 7570 aaKnown RBP3.74□□□□□ -1.81
RORA-207ENST00000558234 LOC100996750A0A140TA64 210 aa3.68□□□□□ -1.82
RORA-207ENST00000558234 LCE4AQ5TA78 99 aa3.63□□□□□ -1.83
RORA-207ENST00000558234 NDUFAF8A1L188 74 aa3.57□□□□□ -1.84
RORA-207ENST00000558234 HMCN1Q96RW7 5635 aa3.57□□□□□ -1.84
RORA-207ENST00000558234 LCE1DQ5T752 114 aa3.53□□□□□ -1.84
RORA-207ENST00000558234 LUZP6Q538Z0 58 aa3.51□□□□□ -1.85
RORA-207ENST00000558234 MT1AP04731 61 aa3.5□□□□□ -1.85
RORA-207ENST00000558234 KRTAP4-9Q9BYQ8 210 aa3.49□□□□□ -1.85
RORA-207ENST00000558234 KRTAP4-6Q9BYQ5 205 aa3.48□□□□□ -1.85
RORA-207ENST00000558234 KRTAP6-1Q3LI64 71 aa3.46□□□□□ -1.86
RORA-207ENST00000558234 KRTAP20-2Q3LI61 65 aa3.43□□□□□ -1.86
RORA-207ENST00000558234 KRTAP5-3Q6L8H2 238 aa3.42□□□□□ -1.86
RORA-207ENST00000558234 MT4P47944 62 aa3.4□□□□□ -1.86
RORA-207ENST00000558234 KRTAP5-2Q701N4 177 aa3.4□□□□□ -1.87
RORA-207ENST00000558234 KRTAP9-4Q9BYQ2 154 aa3.36□□□□□ -1.87
RORA-207ENST00000558234 AHNAK2Q8IVF2 5795 aa3.35□□□□□ -1.87
RORA-207ENST00000558234 SYNE1Q8NF91 8797 aaKnown RBP3.34□□□□□ -1.87
RORA-207ENST00000558234 KRTAP12-4P60329 112 aa3.31□□□□□ -1.88
RORA-207ENST00000558234 KRTAP5-10Q6L8G5 202 aa3.23□□□□□ -1.89
RORA-207ENST00000558234 KRTAP6-2Q3LI66 62 aa3.2□□□□□ -1.9
RORA-207ENST00000558234 GPR98Q8WXG9 6306 aa3.11□□□□□ -1.91
RORA-207ENST00000558234 MT3P25713 68 aa3.09□□□□□ -1.91
RORA-207ENST00000558234 KRTAP5-7Q6L8G8 165 aa3.06□□□□□ -1.92
RORA-207ENST00000558234 KRTAP4-11Q9BYQ6 195 aa3.01□□□□□ -1.93
RORA-207ENST00000558234 INE1O15225 51 aa3.01□□□□□ -1.93
RORA-207ENST00000558234 KRTAP5-8O75690 187 aa3□□□□□ -1.93
RORA-207ENST00000558234 KRTAP5-1Q6L8H4 278 aa2.95□□□□□ -1.94
RORA-207ENST00000558234 LCE3DQ9BYE3 92 aa2.9□□□□□ -1.94
RORA-207ENST00000558234 LCE1EQ5T753 118 aa2.9□□□□□ -1.95
RORA-207ENST00000558234 MUC5ACP98088 5654 aa2.84□□□□□ -1.96
RORA-207ENST00000558234 LCE3EQ5T5B0 92 aa2.83□□□□□ -1.96
RORA-207ENST00000558234 KRTAP9-9Q9BYP9 154 aa2.8□□□□□ -1.96
RORA-207ENST00000558234 KRTAP4-2Q9BYR5 136 aa2.74□□□□□ -1.97
RORA-207ENST00000558234 MUC5BQ9HC84 5762 aaPredicted RBP2.7□□□□□ -1.98
RORA-207ENST00000558234 LCE1CQ5T751 118 aa2.7□□□□□ -1.98
RORA-207ENST00000558234 LCE1BQ5T7P3 118 aa2.7□□□□□ -1.98
RORA-207ENST00000558234 OBSCNQ5VST9 7968 aa2.68□□□□□ -1.98
RORA-207ENST00000558234 AHNAKQ09666 5890 aaKnown RBP2.61□□□□□ -1.99
RORA-207ENST00000558234 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.59□□□□□ -2
RORA-207ENST00000558234 KRTAP4-12Q9BQ66 201 aa2.54□□□□□ -2
RORA-207ENST00000558234 PRM1P04553 51 aa2.47□□□□□ -2.01
RORA-207ENST00000558234 KRTAP5-11Q6L8G4 156 aa2.43□□□□□ -2.02
RORA-207ENST00000558234 LCE1FQ5T754 118 aa2.38□□□□□ -2.03
RORA-207ENST00000558234 KRTAP21-2Q3LI59 83 aa2.35□□□□□ -2.03
RORA-207ENST00000558234 PHGR1C9JFL3 82 aa2.09□□□□□ -2.08
RORA-207ENST00000558234 KRTAP4-4Q9BYR3 166 aa1.91□□□□□ -2.1
RORA-207ENST00000558234 KRTAP21-1Q3LI58 79 aa1.65□□□□□ -2.14
RORA-207ENST00000558234 MUC19Q7Z5P9 8384 aa1.5□□□□□ -2.17
RORA-207ENST00000558234 MUC16Q8WXI7 14507 aa1.38□□□□□ -2.19
Retrieved 78 of 20,778 RNA–protein pairs in 10 ms