RNA–Protein interactions for RNA: ENST00000558080.1

SPG11-205, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 1 (best)

Gene SPG11, Length 759 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-205ENST00000558080 CRIPTQ9P021 101 aa3.29□□□□□ -1.88
SPG11-205ENST00000558080 K7ERS5 55 aa3.26□□□□□ -1.89
SPG11-205ENST00000558080 PMAIP1Q13794 54 aa3.26□□□□□ -1.89
SPG11-205ENST00000558080 KRTAP13-4Q3LI77 160 aa3.26□□□□□ -1.89
SPG11-205ENST00000558080 R4GN34 69 aa3.24□□□□□ -1.89
SPG11-205ENST00000558080 NEBP20929 6669 aa3.24□□□□□ -1.89
SPG11-205ENST00000558080 A0A0D9SG42 100 aa3.22□□□□□ -1.89
SPG11-205ENST00000558080 KRTAP5-2Q701N4 177 aa3.22□□□□□ -1.89
SPG11-205ENST00000558080 MUC12Q9UKN1 5478 aa3.21□□□□□ -1.9
SPG11-205ENST00000558080 LCE3AQ5TA76 89 aa3.18□□□□□ -1.9
SPG11-205ENST00000558080 PLAC4Q8WY50 150 aa3.18□□□□□ -1.9
SPG11-205ENST00000558080 KMT2DO14686 5537 aa3.16□□□□□ -1.9
SPG11-205ENST00000558080 KRTAP12-1P59990 96 aa3.16□□□□□ -1.9
SPG11-205ENST00000558080 MT1XP80297 61 aa3.16□□□□□ -1.9
SPG11-205ENST00000558080 KRTAP20-1Q3LI63 56 aa3.16□□□□□ -1.9
SPG11-205ENST00000558080 LINC01554Q52M75 96 aa3.16□□□□□ -1.9
SPG11-205ENST00000558080 SPINT4Q6UDR6 99 aa3.16□□□□□ -1.9
SPG11-205ENST00000558080 KTN1-AS1Q86SY8 53 aa3.16□□□□□ -1.9
SPG11-205ENST00000558080 PRO2289Q9P1D8 64 aa3.16□□□□□ -1.9
SPG11-205ENST00000558080 KRTAP12-2P59991 146 aa3.14□□□□□ -1.91
SPG11-205ENST00000558080 A0A0A0MQY5 61 aa3.12□□□□□ -1.91
SPG11-205ENST00000558080 SPRR2FQ96RM1 72 aa3.12□□□□□ -1.91
SPG11-205ENST00000558080 ROMO1P60602 79 aa3.1□□□□□ -1.91
SPG11-205ENST00000558080 MDN1Q9NU22 5596 aa3.1□□□□□ -1.91
SPG11-205ENST00000558080 SPRR2EP22531 72 aa3.09□□□□□ -1.91
SPG11-205ENST00000558080 SPRR2BP35325 72 aa3.09□□□□□ -1.91
SPG11-205ENST00000558080 SPRR2AP35326 72 aa3.09□□□□□ -1.91
SPG11-205ENST00000558080 KRTAP8-1Q8IUC2 63 aa3.09□□□□□ -1.91
SPG11-205ENST00000558080 LCE3EQ5T5B0 92 aa3.08□□□□□ -1.92
SPG11-205ENST00000558080 KRTAP2-3P0C7H8 128 aa3.07□□□□□ -1.92
SPG11-205ENST00000558080 KRTAP2-4Q9BYR9 128 aa3.07□□□□□ -1.92
SPG11-205ENST00000558080 CAMK2N1Q7Z7J9 78 aa3.05□□□□□ -1.92
SPG11-205ENST00000558080 PRAC1Q96KF2 57 aa3.03□□□□□ -1.92
SPG11-205ENST00000558080 SPRR2DP22532 72 aa2.98□□□□□ -1.93
SPG11-205ENST00000558080 KRTAP25-1Q3LHN0 102 aa2.98□□□□□ -1.93
SPG11-205ENST00000558080 C10orf95Q9H7T3 257 aa2.98□□□□□ -1.93
SPG11-205ENST00000558080 KRTAP5-5Q701N2 237 aaPredicted RBP2.96□□□□□ -1.94
SPG11-205ENST00000558080 KRTAP2-1Q9BYU5 128 aa2.96□□□□□ -1.94
SPG11-205ENST00000558080 TNP1P09430 55 aa2.92□□□□□ -1.94
SPG11-205ENST00000558080 PP632Q6XCG6 107 aa2.88□□□□□ -1.95
SPG11-205ENST00000558080 NDUFAF8A1L188 74 aa2.85□□□□□ -1.95
SPG11-205ENST00000558080 KRTAP19-7Q3SYF9 63 aa2.82□□□□□ -1.96
SPG11-205ENST00000558080 LCE1CQ5T751 118 aa2.81□□□□□ -1.96
SPG11-205ENST00000558080 LCE1BQ5T7P3 118 aa2.81□□□□□ -1.96
SPG11-205ENST00000558080 MT1EP04732 61 aa2.8□□□□□ -1.96
SPG11-205ENST00000558080 KRTAP19-3Q7Z4W3 81 aa2.78□□□□□ -1.96
SPG11-205ENST00000558080 DSTQ03001 7570 aaKnown RBP2.77□□□□□ -1.97
SPG11-205ENST00000558080 KRTAP19-5Q3LI72 72 aa2.76□□□□□ -1.97
SPG11-205ENST00000558080 MT1GP13640 62 aa2.71□□□□□ -1.98
SPG11-205ENST00000558080 KRTAP5-8O75690 187 aa2.68□□□□□ -1.98
SPG11-205ENST00000558080 MT1LQ93083 61 aa2.68□□□□□ -1.98
SPG11-205ENST00000558080 MT1MQ8N339 61 aa2.67□□□□□ -1.98
SPG11-205ENST00000558080 KRTAP12-3P60328 96 aa2.65□□□□□ -1.99
SPG11-205ENST00000558080 GPR98Q8WXG9 6306 aa2.65□□□□□ -1.99
SPG11-205ENST00000558080 MT4P47944 62 aa2.62□□□□□ -1.99
SPG11-205ENST00000558080 HMCN1Q96RW7 5635 aa2.58□□□□□ -2
SPG11-205ENST00000558080 SPRR5A0A1B0GTR4 108 aa2.54□□□□□ -2
SPG11-205ENST00000558080 AHNAK2Q8IVF2 5795 aa2.51□□□□□ -2.01
SPG11-205ENST00000558080 LUZP6Q538Z0 58 aa2.51□□□□□ -2.01
SPG11-205ENST00000558080 KRTAP5-10Q6L8G5 202 aa2.45□□□□□ -2.02
SPG11-205ENST00000558080 KRTAP20-2Q3LI61 65 aa2.42□□□□□ -2.02
SPG11-205ENST00000558080 KRTAP12-4P60329 112 aa2.4□□□□□ -2.03
SPG11-205ENST00000558080 LCE3DQ9BYE3 92 aa2.37□□□□□ -2.03
SPG11-205ENST00000558080 SYNE1Q8NF91 8797 aaKnown RBP2.37□□□□□ -2.03
SPG11-205ENST00000558080 KRTAP5-7Q6L8G8 165 aa2.36□□□□□ -2.03
SPG11-205ENST00000558080 MUC19Q7Z5P9 8384 aa2.29□□□□□ -2.04
SPG11-205ENST00000558080 MT1AP04731 61 aa2.27□□□□□ -2.05
SPG11-205ENST00000558080 KRTAP6-1Q3LI64 71 aa2.27□□□□□ -2.05
SPG11-205ENST00000558080 KRTAP6-2Q3LI66 62 aa2.18□□□□□ -2.06
SPG11-205ENST00000558080 AHNAKQ09666 5890 aaKnown RBP2.08□□□□□ -2.08
SPG11-205ENST00000558080 MUC5ACP98088 5654 aa2.07□□□□□ -2.08
SPG11-205ENST00000558080 MUC5BQ9HC84 5762 aaPredicted RBP2.06□□□□□ -2.08
SPG11-205ENST00000558080 INE1O15225 51 aa2.06□□□□□ -2.08
SPG11-205ENST00000558080 KRTAP21-2Q3LI59 83 aa2.03□□□□□ -2.08
SPG11-205ENST00000558080 PRM1P04553 51 aa1.61□□□□□ -2.15
SPG11-205ENST00000558080 PHGR1C9JFL3 82 aa1.44□□□□□ -2.18
SPG11-205ENST00000558080 KRTAP21-1Q3LI58 79 aa1.08□□□□□ -2.24
SPG11-205ENST00000558080 MUC16Q8WXI7 14507 aa0.92□□□□□ -2.26
Retrieved 78 of 20,778 RNA–protein pairs in 40.5 ms