RNA–Protein interactions for RNA: ENST00000558059.5

SNRPA1-206, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 678 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-206ENST00000558059 MT3P25713 68 aa3.29□□□□□ -1.88
SNRPA1-206ENST00000558059 ANAPC13Q9BS18 74 aa3.29□□□□□ -1.88
SNRPA1-206ENST00000558059 A0A1B0GU69 56 aa3.27□□□□□ -1.89
SNRPA1-206ENST00000558059 MT1EP04732 61 aa3.27□□□□□ -1.89
SNRPA1-206ENST00000558059 CCDC179H3BU77 68 aa3.26□□□□□ -1.89
SNRPA1-206ENST00000558059 SMIM26A0A096LP01 95 aa3.24□□□□□ -1.89
SNRPA1-206ENST00000558059 A8MU10 97 aa3.24□□□□□ -1.89
SNRPA1-206ENST00000558059 KRTAP19-3Q7Z4W3 81 aa3.24□□□□□ -1.89
SNRPA1-206ENST00000558059 DSTQ03001 7570 aaKnown RBP3.21□□□□□ -1.9
SNRPA1-206ENST00000558059 KRTAP9-6A8MVA2 160 aa3.21□□□□□ -1.9
SNRPA1-206ENST00000558059 KRTAP19-5Q3LI72 72 aa3.21□□□□□ -1.9
SNRPA1-206ENST00000558059 OBSCNQ5VST9 7968 aa3.21□□□□□ -1.9
SNRPA1-206ENST00000558059 ATP5EP56381 51 aaPredicted RBP3.19□□□□□ -1.9
SNRPA1-206ENST00000558059 C10orf95Q9H7T3 257 aa3.18□□□□□ -1.9
SNRPA1-206ENST00000558059 MT1GP13640 62 aa3.17□□□□□ -1.9
SNRPA1-206ENST00000558059 LINC01558Q9Y6Z2 57 aa3.16□□□□□ -1.9
SNRPA1-206ENST00000558059 PRR15LQ9BU68 103 aa3.15□□□□□ -1.91
SNRPA1-206ENST00000558059 GPR98Q8WXG9 6306 aa3.14□□□□□ -1.91
SNRPA1-206ENST00000558059 LCE3AQ5TA76 89 aa3.14□□□□□ -1.91
SNRPA1-206ENST00000558059 TNP1P09430 55 aa3.13□□□□□ -1.91
SNRPA1-206ENST00000558059 MT1LQ93083 61 aa3.13□□□□□ -1.91
SNRPA1-206ENST00000558059 MT1MQ8N339 61 aa3.12□□□□□ -1.91
SNRPA1-206ENST00000558059 TMEM258P61165 79 aa3.11□□□□□ -1.91
SNRPA1-206ENST00000558059 PP632Q6XCG6 107 aa3.11□□□□□ -1.91
SNRPA1-206ENST00000558059 UQCR11O14957 56 aa3.07□□□□□ -1.92
SNRPA1-206ENST00000558059 KRTAP4-3Q9BYR4 195 aa3.05□□□□□ -1.92
SNRPA1-206ENST00000558059 KRTAP12-3P60328 96 aa3.01□□□□□ -1.93
SNRPA1-206ENST00000558059 MIR22HGQ0VDD5 57 aa3□□□□□ -1.93
SNRPA1-206ENST00000558059 HMCN1Q96RW7 5635 aa2.99□□□□□ -1.93
SNRPA1-206ENST00000558059 MT4P47944 62 aa2.98□□□□□ -1.93
SNRPA1-206ENST00000558059 LCE1FQ5T754 118 aa2.98□□□□□ -1.93
SNRPA1-206ENST00000558059 KRTAP25-1Q3LHN0 102 aa2.96□□□□□ -1.94
SNRPA1-206ENST00000558059 PSPHP1O15172 72 aa2.94□□□□□ -1.94
SNRPA1-206ENST00000558059 Q1T7F1 81 aa2.94□□□□□ -1.94
SNRPA1-206ENST00000558059 V9GYY9 64 aa2.94□□□□□ -1.94
SNRPA1-206ENST00000558059 K7ERS5 55 aa2.92□□□□□ -1.94
SNRPA1-206ENST00000558059 KRTAP5-2Q701N4 177 aa2.92□□□□□ -1.94
SNRPA1-206ENST00000558059 AHNAK2Q8IVF2 5795 aa2.92□□□□□ -1.94
SNRPA1-206ENST00000558059 KRTAP5-5Q701N2 237 aaPredicted RBP2.87□□□□□ -1.95
SNRPA1-206ENST00000558059 A6NED7 52 aa2.83□□□□□ -1.96
SNRPA1-206ENST00000558059 LCE3CQ5T5A8 94 aa2.82□□□□□ -1.96
SNRPA1-206ENST00000558059 SYNE1Q8NF91 8797 aaKnown RBP2.82□□□□□ -1.96
SNRPA1-206ENST00000558059 KRTAP20-2Q3LI61 65 aa2.81□□□□□ -1.96
SNRPA1-206ENST00000558059 KRTAP5-10Q6L8G5 202 aa2.81□□□□□ -1.96
SNRPA1-206ENST00000558059 SPRR5A0A1B0GTR4 108 aa2.78□□□□□ -1.96
SNRPA1-206ENST00000558059 RPS28P62857 69 aaKnown RBP2.78□□□□□ -1.96
SNRPA1-206ENST00000558059 KRTAP12-4P60329 112 aa2.77□□□□□ -1.97
SNRPA1-206ENST00000558059 CDC42SE1Q9NRR8 79 aa2.77□□□□□ -1.97
SNRPA1-206ENST00000558059 ROMO1P60602 79 aa2.75□□□□□ -1.97
SNRPA1-206ENST00000558059 PCP4P48539 62 aa2.7□□□□□ -1.98
SNRPA1-206ENST00000558059 KRTAP5-7Q6L8G8 165 aa2.7□□□□□ -1.98
SNRPA1-206ENST00000558059 MT1AP04731 61 aa2.66□□□□□ -1.98
SNRPA1-206ENST00000558059 KRTAP6-1Q3LI64 71 aa2.65□□□□□ -1.99
SNRPA1-206ENST00000558059 LCE3EQ5T5B0 92 aa2.56□□□□□ -2
SNRPA1-206ENST00000558059 KRTAP6-2Q3LI66 62 aa2.53□□□□□ -2
SNRPA1-206ENST00000558059 KRTAP5-8O75690 187 aa2.48□□□□□ -2.01
SNRPA1-206ENST00000558059 AHNAKQ09666 5890 aaKnown RBP2.47□□□□□ -2.01
SNRPA1-206ENST00000558059 LCE1CQ5T751 118 aa2.41□□□□□ -2.02
SNRPA1-206ENST00000558059 LCE1BQ5T7P3 118 aa2.41□□□□□ -2.02
SNRPA1-206ENST00000558059 BRK1Q8WUW1 75 aa2.4□□□□□ -2.03
SNRPA1-206ENST00000558059 MUC5BQ9HC84 5762 aaPredicted RBP2.39□□□□□ -2.03
SNRPA1-206ENST00000558059 MUC5ACP98088 5654 aa2.36□□□□□ -2.03
SNRPA1-206ENST00000558059 PMAIP1Q13794 54 aa2.27□□□□□ -2.05
SNRPA1-206ENST00000558059 A0A0A0MQY5 61 aa2.23□□□□□ -2.05
SNRPA1-206ENST00000558059 PRAC1Q96KF2 57 aa2.21□□□□□ -2.06
SNRPA1-206ENST00000558059 MUC19Q7Z5P9 8384 aa2.15□□□□□ -2.07
SNRPA1-206ENST00000558059 NDUFAF8A1L188 74 aa2.1□□□□□ -2.07
SNRPA1-206ENST00000558059 PRO0628Q9UI54 55 aa2.06□□□□□ -2.08
SNRPA1-206ENST00000558059 LCE3DQ9BYE3 92 aa2□□□□□ -2.09
SNRPA1-206ENST00000558059 KTN1-AS1Q86SY8 53 aa1.98□□□□□ -2.09
SNRPA1-206ENST00000558059 SVIPQ8NHG7 77 aa1.88□□□□□ -2.11
SNRPA1-206ENST00000558059 LUZP6Q538Z0 58 aa1.83□□□□□ -2.12
SNRPA1-206ENST00000558059 KRTAP21-2Q3LI59 83 aa1.77□□□□□ -2.13
SNRPA1-206ENST00000558059 PHGR1C9JFL3 82 aa1.65□□□□□ -2.15
SNRPA1-206ENST00000558059 PRM1P04553 51 aa1.41□□□□□ -2.18
SNRPA1-206ENST00000558059 KRTAP21-1Q3LI58 79 aa1.27□□□□□ -2.21
SNRPA1-206ENST00000558059 INE1O15225 51 aa1.14□□□□□ -2.23
SNRPA1-206ENST00000558059 MUC16Q8WXI7 14507 aa1.09□□□□□ -2.24
Retrieved 78 of 20,778 RNA–protein pairs in 13.1 ms