RNA–Protein interactions for RNA: ENST00000558020.1

SNRPA1-204, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 3

Gene SNRPA1, Length 466 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-204ENST00000558020 SPATA8Q6RVD6 105 aa4.99□□□□□ -1.61
SNRPA1-204ENST00000558020 PP632Q6XCG6 107 aa4.98□□□□□ -1.61
SNRPA1-204ENST00000558020 PRR15LQ9BU68 103 aa4.98□□□□□ -1.61
SNRPA1-204ENST00000558020 MT1GP13640 62 aa4.97□□□□□ -1.61
SNRPA1-204ENST00000558020 PCP4P48539 62 aa4.95□□□□□ -1.62
SNRPA1-204ENST00000558020 KRTAP19-5Q3LI72 72 aa4.94□□□□□ -1.62
SNRPA1-204ENST00000558020 KRTAP12-1P59990 96 aa4.92□□□□□ -1.62
SNRPA1-204ENST00000558020 SMIM26A0A096LP01 95 aa4.91□□□□□ -1.62
SNRPA1-204ENST00000558020 LINC01558Q9Y6Z2 57 aa4.9□□□□□ -1.63
SNRPA1-204ENST00000558020 MT1MQ8N339 61 aa4.83□□□□□ -1.64
SNRPA1-204ENST00000558020 A8MU10 97 aa4.81□□□□□ -1.64
SNRPA1-204ENST00000558020 TNP1P09430 55 aa4.81□□□□□ -1.64
SNRPA1-204ENST00000558020 MT1LQ93083 61 aa4.81□□□□□ -1.64
SNRPA1-204ENST00000558020 MT4P47944 62 aa4.8□□□□□ -1.64
SNRPA1-204ENST00000558020 UQCR11O14957 56 aa4.79□□□□□ -1.64
SNRPA1-204ENST00000558020 V9GYY9 64 aa4.78□□□□□ -1.64
SNRPA1-204ENST00000558020 HMCN1Q96RW7 5635 aa4.77□□□□□ -1.65
SNRPA1-204ENST00000558020 C10orf95Q9H7T3 257 aa4.76□□□□□ -1.65
SNRPA1-204ENST00000558020 LCE3AQ5TA76 89 aa4.74□□□□□ -1.65
SNRPA1-204ENST00000558020 KRTAP15-1Q3LI76 137 aa4.73□□□□□ -1.65
SNRPA1-204ENST00000558020 Q1T7F1 81 aa4.7□□□□□ -1.66
SNRPA1-204ENST00000558020 KRTAP5-4Q6L8H1 288 aa4.69□□□□□ -1.66
SNRPA1-204ENST00000558020 KRTAP4-3Q9BYR4 195 aa4.69□□□□□ -1.66
SNRPA1-204ENST00000558020 PSPHP1O15172 72 aa4.68□□□□□ -1.66
SNRPA1-204ENST00000558020 MIR22HGQ0VDD5 57 aa4.68□□□□□ -1.66
SNRPA1-204ENST00000558020 AHNAK2Q8IVF2 5795 aa4.63□□□□□ -1.67
SNRPA1-204ENST00000558020 A0A0A0MQY5 61 aa4.62□□□□□ -1.67
SNRPA1-204ENST00000558020 K7ERS5 55 aa4.62□□□□□ -1.67
SNRPA1-204ENST00000558020 RPS28P62857 69 aaKnown RBP4.62□□□□□ -1.67
SNRPA1-204ENST00000558020 KRTAP12-3P60328 96 aa4.61□□□□□ -1.67
SNRPA1-204ENST00000558020 KRTAP5-10Q6L8G5 202 aa4.58□□□□□ -1.68
SNRPA1-204ENST00000558020 A6NED7 52 aa4.56□□□□□ -1.68
SNRPA1-204ENST00000558020 KRTAP12-4P60329 112 aa4.46□□□□□ -1.7
SNRPA1-204ENST00000558020 KRTAP25-1Q3LHN0 102 aa4.46□□□□□ -1.7
SNRPA1-204ENST00000558020 SPRR5A0A1B0GTR4 108 aa4.45□□□□□ -1.7
SNRPA1-204ENST00000558020 KRTAP5-3Q6L8H2 238 aa4.45□□□□□ -1.7
SNRPA1-204ENST00000558020 KRTAP20-2Q3LI61 65 aa4.44□□□□□ -1.7
SNRPA1-204ENST00000558020 KRTAP5-7Q6L8G8 165 aa4.44□□□□□ -1.7
SNRPA1-204ENST00000558020 KRTAP5-5Q701N2 237 aaPredicted RBP4.43□□□□□ -1.7
SNRPA1-204ENST00000558020 CDC42SE1Q9NRR8 79 aa4.37□□□□□ -1.71
SNRPA1-204ENST00000558020 ROMO1P60602 79 aa4.28□□□□□ -1.72
SNRPA1-204ENST00000558020 LCE3CQ5T5A8 94 aa4.23□□□□□ -1.73
SNRPA1-204ENST00000558020 SYNE1Q8NF91 8797 aaKnown RBP4.21□□□□□ -1.73
SNRPA1-204ENST00000558020 BRK1Q8WUW1 75 aa4.12□□□□□ -1.75
SNRPA1-204ENST00000558020 MT1AP04731 61 aa4.1□□□□□ -1.75
SNRPA1-204ENST00000558020 KRTAP5-2Q701N4 177 aa4.08□□□□□ -1.76
SNRPA1-204ENST00000558020 KRTAP6-1Q3LI64 71 aa4.06□□□□□ -1.76
SNRPA1-204ENST00000558020 KRTAP5-8O75690 187 aa3.95□□□□□ -1.78
SNRPA1-204ENST00000558020 KRTAP6-2Q3LI66 62 aa3.94□□□□□ -1.78
SNRPA1-204ENST00000558020 KRTAP9-6A8MVA2 160 aa3.91□□□□□ -1.78
SNRPA1-204ENST00000558020 OBSCNQ5VST9 7968 aa3.9□□□□□ -1.78
SNRPA1-204ENST00000558020 AHNAKQ09666 5890 aaKnown RBP3.89□□□□□ -1.79
SNRPA1-204ENST00000558020 PMAIP1Q13794 54 aa3.88□□□□□ -1.79
SNRPA1-204ENST00000558020 MUC5ACP98088 5654 aa3.88□□□□□ -1.79
SNRPA1-204ENST00000558020 MUC5BQ9HC84 5762 aaPredicted RBP3.83□□□□□ -1.8
SNRPA1-204ENST00000558020 MT3P25713 68 aa3.81□□□□□ -1.8
SNRPA1-204ENST00000558020 PRAC1Q96KF2 57 aa3.78□□□□□ -1.8
SNRPA1-204ENST00000558020 PRO0628Q9UI54 55 aa3.73□□□□□ -1.81
SNRPA1-204ENST00000558020 KRTAP5-1Q6L8H4 278 aa3.68□□□□□ -1.82
SNRPA1-204ENST00000558020 NDUFAF8A1L188 74 aa3.55□□□□□ -1.84
SNRPA1-204ENST00000558020 KTN1-AS1Q86SY8 53 aa3.54□□□□□ -1.84
SNRPA1-204ENST00000558020 LCE1EQ5T753 118 aa3.53□□□□□ -1.84
SNRPA1-204ENST00000558020 LCE1FQ5T754 118 aa3.42□□□□□ -1.86
SNRPA1-204ENST00000558020 KRTAP5-11Q6L8G4 156 aa3.37□□□□□ -1.87
SNRPA1-204ENST00000558020 LCE1BQ5T7P3 118 aa3.32□□□□□ -1.88
SNRPA1-204ENST00000558020 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.31□□□□□ -1.88
SNRPA1-204ENST00000558020 LCE1CQ5T751 118 aa3.27□□□□□ -1.89
SNRPA1-204ENST00000558020 LUZP6Q538Z0 58 aa3.24□□□□□ -1.89
SNRPA1-204ENST00000558020 LCE3DQ9BYE3 92 aa3.04□□□□□ -1.92
SNRPA1-204ENST00000558020 LCE3EQ5T5B0 92 aa2.87□□□□□ -1.95
SNRPA1-204ENST00000558020 KRTAP4-4Q9BYR3 166 aa2.76□□□□□ -1.97
SNRPA1-204ENST00000558020 PHGR1C9JFL3 82 aa2.7□□□□□ -1.98
SNRPA1-204ENST00000558020 KRTAP21-2Q3LI59 83 aa2.68□□□□□ -1.98
SNRPA1-204ENST00000558020 MUC19Q7Z5P9 8384 aa2.41□□□□□ -2.02
SNRPA1-204ENST00000558020 INE1O15225 51 aa2.35□□□□□ -2.03
SNRPA1-204ENST00000558020 PRM1P04553 51 aa2.19□□□□□ -2.06
SNRPA1-204ENST00000558020 KRTAP21-1Q3LI58 79 aa2.08□□□□□ -2.08
SNRPA1-204ENST00000558020 MUC16Q8WXI7 14507 aa1.68□□□□□ -2.14
Retrieved 78 of 20,778 RNA–protein pairs in 138.3 ms