RNA–Protein interactions for RNA: ENST00000557662.1

RIPK3-207, Transcript of receptor interacting serine/threonine kinase 3, humanhuman

TSL 2

Gene RIPK3, Length 569 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK3-207ENST00000557662 PRO0628Q9UI54 55 aa8.09□□□□□ -1.11
RIPK3-207ENST00000557662 MT4P47944 62 aa8.07□□□□□ -1.12
RIPK3-207ENST00000557662 KRTAP5-4Q6L8H1 288 aa8.07□□□□□ -1.12
RIPK3-207ENST00000557662 KRTAP4-3Q9BYR4 195 aa8.01□□□□□ -1.13
RIPK3-207ENST00000557662 Q1T7F1 81 aa8□□□□□ -1.13
RIPK3-207ENST00000557662 LCE3AQ5TA76 89 aa7.98□□□□□ -1.13
RIPK3-207ENST00000557662 C10orf95Q9H7T3 257 aa7.98□□□□□ -1.13
RIPK3-207ENST00000557662 BRK1Q8WUW1 75 aa7.94□□□□□ -1.14
RIPK3-207ENST00000557662 AHNAK2Q8IVF2 5795 aa7.93□□□□□ -1.14
RIPK3-207ENST00000557662 A8MU10 97 aa7.91□□□□□ -1.14
RIPK3-207ENST00000557662 KRTAP4-6Q9BYQ5 205 aa7.89□□□□□ -1.15
RIPK3-207ENST00000557662 KRTAP5-10Q6L8G5 202 aa7.88□□□□□ -1.15
RIPK3-207ENST00000557662 A0A1B0GU69 56 aa7.85□□□□□ -1.15
RIPK3-207ENST00000557662 TNP1P09430 55 aa7.85□□□□□ -1.15
RIPK3-207ENST00000557662 PSPHP1O15172 72 aa7.75□□□□□ -1.17
RIPK3-207ENST00000557662 KRTAP4-7Q9BYR0 210 aa7.74□□□□□ -1.17
RIPK3-207ENST00000557662 PRR15LQ9BU68 103 aa7.71□□□□□ -1.18
RIPK3-207ENST00000557662 KRTAP12-3P60328 96 aa7.66□□□□□ -1.18
RIPK3-207ENST00000557662 LINC01558Q9Y6Z2 57 aa7.65□□□□□ -1.18
RIPK3-207ENST00000557662 A6NED7 52 aa7.63□□□□□ -1.19
RIPK3-207ENST00000557662 KRTAP5-5Q701N2 237 aaPredicted RBP7.63□□□□□ -1.19
RIPK3-207ENST00000557662 KRTAP5-3Q6L8H2 238 aa7.61□□□□□ -1.19
RIPK3-207ENST00000557662 KRTAP5-7Q6L8G8 165 aa7.6□□□□□ -1.19
RIPK3-207ENST00000557662 KRTAP20-2Q3LI61 65 aa7.58□□□□□ -1.2
RIPK3-207ENST00000557662 PMAIP1Q13794 54 aa7.57□□□□□ -1.2
RIPK3-207ENST00000557662 CDC42SE1Q9NRR8 79 aa7.56□□□□□ -1.2
RIPK3-207ENST00000557662 SPRR5A0A1B0GTR4 108 aa7.51□□□□□ -1.21
RIPK3-207ENST00000557662 KTN1-AS1Q86SY8 53 aa7.42□□□□□ -1.22
RIPK3-207ENST00000557662 KRTAP12-4P60329 112 aa7.35□□□□□ -1.23
RIPK3-207ENST00000557662 LOC100996750A0A140TA64 210 aa7.34□□□□□ -1.23
RIPK3-207ENST00000557662 SYNE1Q8NF91 8797 aaKnown RBP7.33□□□□□ -1.24
RIPK3-207ENST00000557662 UQCR11O14957 56 aa7.32□□□□□ -1.24
RIPK3-207ENST00000557662 KRTAP25-1Q3LHN0 102 aa7.3□□□□□ -1.24
RIPK3-207ENST00000557662 KRTAP19-4Q3LI73 84 aa7.26□□□□□ -1.25
RIPK3-207ENST00000557662 MIR22HGQ0VDD5 57 aa7.25□□□□□ -1.25
RIPK3-207ENST00000557662 KRTAP23-1A1A580 65 aa7.07□□□□□ -1.28
RIPK3-207ENST00000557662 KRTAP15-1Q3LI76 137 aa7.06□□□□□ -1.28
RIPK3-207ENST00000557662 LCE3CQ5T5A8 94 aa7.04□□□□□ -1.28
RIPK3-207ENST00000557662 KRTAP5-2Q701N4 177 aa7.03□□□□□ -1.28
RIPK3-207ENST00000557662 K7ERS5 55 aa7.02□□□□□ -1.29
RIPK3-207ENST00000557662 KRTAP4-11Q9BYQ6 195 aa6.97□□□□□ -1.29
RIPK3-207ENST00000557662 MT1AP04731 61 aa6.94□□□□□ -1.3
RIPK3-207ENST00000557662 KRTAP6-1Q3LI64 71 aa6.92□□□□□ -1.3
RIPK3-207ENST00000557662 PRAC1Q96KF2 57 aa6.84□□□□□ -1.31
RIPK3-207ENST00000557662 KRTAP5-8O75690 187 aa6.79□□□□□ -1.32
RIPK3-207ENST00000557662 KRTAP9-6A8MVA2 160 aa6.74□□□□□ -1.33
RIPK3-207ENST00000557662 KRTAP9-4Q9BYQ2 154 aa6.73□□□□□ -1.33
RIPK3-207ENST00000557662 ROMO1P60602 79 aa6.65□□□□□ -1.34
RIPK3-207ENST00000557662 KRTAP6-2Q3LI66 62 aa6.64□□□□□ -1.35
RIPK3-207ENST00000557662 MUC5ACP98088 5654 aa6.59□□□□□ -1.36
RIPK3-207ENST00000557662 OBSCNQ5VST9 7968 aa6.57□□□□□ -1.36
RIPK3-207ENST00000557662 MUC5BQ9HC84 5762 aaPredicted RBP6.56□□□□□ -1.36
RIPK3-207ENST00000557662 AHNAKQ09666 5890 aaKnown RBP6.53□□□□□ -1.36
RIPK3-207ENST00000557662 KRTAP9-9Q9BYP9 154 aa6.38□□□□□ -1.39
RIPK3-207ENST00000557662 KRTAP5-1Q6L8H4 278 aa6.35□□□□□ -1.39
RIPK3-207ENST00000557662 MT3P25713 68 aa6.32□□□□□ -1.4
RIPK3-207ENST00000557662 H3BS24 57 aa6.14□□□□□ -1.43
RIPK3-207ENST00000557662 LCE1EQ5T753 118 aa5.94□□□□□ -1.46
RIPK3-207ENST00000557662 NDUFAF8A1L188 74 aa5.84□□□□□ -1.47
RIPK3-207ENST00000557662 LUZP6Q538Z0 58 aa5.78□□□□□ -1.48
RIPK3-207ENST00000557662 KRTAP4-2Q9BYR5 136 aa5.68□□□□□ -1.5
RIPK3-207ENST00000557662 LCE1CQ5T751 118 aa5.51□□□□□ -1.53
RIPK3-207ENST00000557662 LCE1BQ5T7P3 118 aa5.51□□□□□ -1.53
RIPK3-207ENST00000557662 A0A0A0MQY5 61 aa5.5□□□□□ -1.53
RIPK3-207ENST00000557662 KRTAP4-12Q9BQ66 201 aa5.14□□□□□ -1.59
RIPK3-207ENST00000557662 KRTAP5-11Q6L8G4 156 aa5.04□□□□□ -1.6
RIPK3-207ENST00000557662 KRTAP5-6Q6L8G9 129 aaPredicted RBP5.04□□□□□ -1.6
RIPK3-207ENST00000557662 INE1O15225 51 aa5□□□□□ -1.61
RIPK3-207ENST00000557662 LCE3DQ9BYE3 92 aa4.98□□□□□ -1.61
RIPK3-207ENST00000557662 LCE1FQ5T754 118 aa4.95□□□□□ -1.62
RIPK3-207ENST00000557662 LCE3EQ5T5B0 92 aa4.63□□□□□ -1.67
RIPK3-207ENST00000557662 KRTAP21-2Q3LI59 83 aa4.61□□□□□ -1.67
RIPK3-207ENST00000557662 PHGR1C9JFL3 82 aa4.52□□□□□ -1.69
RIPK3-207ENST00000557662 KRTAP4-4Q9BYR3 166 aa4.17□□□□□ -1.74
RIPK3-207ENST00000557662 MUC19Q7Z5P9 8384 aa4.08□□□□□ -1.76
RIPK3-207ENST00000557662 KRTAP21-1Q3LI58 79 aa3.45□□□□□ -1.86
RIPK3-207ENST00000557662 PRM1P04553 51 aa3.44□□□□□ -1.86
RIPK3-207ENST00000557662 MUC16Q8WXI7 14507 aa2.87□□□□□ -1.95
Retrieved 78 of 20,778 RNA–protein pairs in 62.5 ms