RNA–Protein interactions for RNA: ENST00000557517.1

PSMC6-215, Transcript of proteasome 26S subunit, ATPase 6, humanhuman

TSL 3

Gene PSMC6, Length 580 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMC6-215ENST00000557517 KRTAP9-6A8MVA2 160 aa3.99□□□□□ -1.77
PSMC6-215ENST00000557517 KRTAP19-7Q3SYF9 63 aa3.99□□□□□ -1.77
PSMC6-215ENST00000557517 TMEM258P61165 79 aa3.95□□□□□ -1.78
PSMC6-215ENST00000557517 MT1EP04732 61 aa3.94□□□□□ -1.78
PSMC6-215ENST00000557517 A0A1B0GU33 70 aa3.93□□□□□ -1.78
PSMC6-215ENST00000557517 SPATA8Q6RVD6 105 aa3.93□□□□□ -1.78
PSMC6-215ENST00000557517 KRTAP19-3Q7Z4W3 81 aa3.93□□□□□ -1.78
PSMC6-215ENST00000557517 A0A0D9SG42 100 aa3.92□□□□□ -1.78
PSMC6-215ENST00000557517 A0A1B0GU69 56 aa3.92□□□□□ -1.78
PSMC6-215ENST00000557517 HMCN1Q96RW7 5635 aa3.92□□□□□ -1.78
PSMC6-215ENST00000557517 PRR15LQ9BU68 103 aa3.9□□□□□ -1.79
PSMC6-215ENST00000557517 KRTAP12-1P59990 96 aa3.89□□□□□ -1.79
PSMC6-215ENST00000557517 AHNAK2Q8IVF2 5795 aa3.89□□□□□ -1.79
PSMC6-215ENST00000557517 SPINT4Q6UDR6 99 aa3.88□□□□□ -1.79
PSMC6-215ENST00000557517 KRTAP5-10Q6L8G5 202 aa3.87□□□□□ -1.79
PSMC6-215ENST00000557517 MT1GP13640 62 aa3.86□□□□□ -1.79
PSMC6-215ENST00000557517 SMIM26A0A096LP01 95 aa3.85□□□□□ -1.79
PSMC6-215ENST00000557517 KRTAP19-5Q3LI72 72 aa3.85□□□□□ -1.79
PSMC6-215ENST00000557517 LINC01558Q9Y6Z2 57 aa3.83□□□□□ -1.8
PSMC6-215ENST00000557517 KRTAP5-7Q6L8G8 165 aa3.78□□□□□ -1.8
PSMC6-215ENST00000557517 PP632Q6XCG6 107 aa3.78□□□□□ -1.8
PSMC6-215ENST00000557517 MT4P47944 62 aa3.77□□□□□ -1.81
PSMC6-215ENST00000557517 V9GYY9 64 aa3.77□□□□□ -1.81
PSMC6-215ENST00000557517 A8MU10 97 aa3.76□□□□□ -1.81
PSMC6-215ENST00000557517 MT1LQ93083 61 aa3.76□□□□□ -1.81
PSMC6-215ENST00000557517 UQCR11O14957 56 aa3.75□□□□□ -1.81
PSMC6-215ENST00000557517 MT1MQ8N339 61 aa3.75□□□□□ -1.81
PSMC6-215ENST00000557517 OBSCNQ5VST9 7968 aa3.75□□□□□ -1.81
PSMC6-215ENST00000557517 C10orf95Q9H7T3 257 aa3.74□□□□□ -1.81
PSMC6-215ENST00000557517 LCE1FQ5T754 118 aa3.73□□□□□ -1.81
PSMC6-215ENST00000557517 TNP1P09430 55 aa3.72□□□□□ -1.81
PSMC6-215ENST00000557517 SVIPQ8NHG7 77 aa3.72□□□□□ -1.81
PSMC6-215ENST00000557517 PCP4P48539 62 aa3.71□□□□□ -1.82
PSMC6-215ENST00000557517 LCE3AQ5TA76 89 aa3.71□□□□□ -1.82
PSMC6-215ENST00000557517 Q1T7F1 81 aa3.69□□□□□ -1.82
PSMC6-215ENST00000557517 RPS28P62857 69 aaKnown RBP3.68□□□□□ -1.82
PSMC6-215ENST00000557517 KRTAP4-3Q9BYR4 195 aa3.66□□□□□ -1.82
PSMC6-215ENST00000557517 MIR22HGQ0VDD5 57 aa3.65□□□□□ -1.83
PSMC6-215ENST00000557517 K7ERS5 55 aa3.63□□□□□ -1.83
PSMC6-215ENST00000557517 PSPHP1O15172 72 aa3.63□□□□□ -1.83
PSMC6-215ENST00000557517 KRTAP12-3P60328 96 aa3.59□□□□□ -1.83
PSMC6-215ENST00000557517 LCE3CQ5T5A8 94 aa3.58□□□□□ -1.84
PSMC6-215ENST00000557517 SPRR5A0A1B0GTR4 108 aa3.57□□□□□ -1.84
PSMC6-215ENST00000557517 A6NED7 52 aa3.56□□□□□ -1.84
PSMC6-215ENST00000557517 KRTAP25-1Q3LHN0 102 aa3.49□□□□□ -1.85
PSMC6-215ENST00000557517 KRTAP5-5Q701N2 237 aaPredicted RBP3.49□□□□□ -1.85
PSMC6-215ENST00000557517 KRTAP20-2Q3LI61 65 aa3.48□□□□□ -1.85
PSMC6-215ENST00000557517 CDC42SE1Q9NRR8 79 aa3.41□□□□□ -1.86
PSMC6-215ENST00000557517 KRTAP5-2Q701N4 177 aa3.4□□□□□ -1.87
PSMC6-215ENST00000557517 KRTAP12-4P60329 112 aa3.38□□□□□ -1.87
PSMC6-215ENST00000557517 A0A0A0MQY5 61 aa3.37□□□□□ -1.87
PSMC6-215ENST00000557517 SYNE1Q8NF91 8797 aaKnown RBP3.37□□□□□ -1.87
PSMC6-215ENST00000557517 AHNAKQ09666 5890 aaKnown RBP3.36□□□□□ -1.87
PSMC6-215ENST00000557517 ROMO1P60602 79 aa3.35□□□□□ -1.87
PSMC6-215ENST00000557517 MUC5ACP98088 5654 aa3.31□□□□□ -1.88
PSMC6-215ENST00000557517 MUC5BQ9HC84 5762 aaPredicted RBP3.29□□□□□ -1.88
PSMC6-215ENST00000557517 LCE3EQ5T5B0 92 aa3.25□□□□□ -1.89
PSMC6-215ENST00000557517 BRK1Q8WUW1 75 aa3.21□□□□□ -1.9
PSMC6-215ENST00000557517 KRTAP5-8O75690 187 aa3.19□□□□□ -1.9
PSMC6-215ENST00000557517 MT1AP04731 61 aa3.19□□□□□ -1.9
PSMC6-215ENST00000557517 KRTAP6-1Q3LI64 71 aa3.17□□□□□ -1.9
PSMC6-215ENST00000557517 NDUFAF8A1L188 74 aa3.08□□□□□ -1.92
PSMC6-215ENST00000557517 PMAIP1Q13794 54 aa3.06□□□□□ -1.92
PSMC6-215ENST00000557517 KRTAP6-2Q3LI66 62 aa3.05□□□□□ -1.92
PSMC6-215ENST00000557517 LCE1CQ5T751 118 aa2.99□□□□□ -1.93
PSMC6-215ENST00000557517 LCE1BQ5T7P3 118 aa2.99□□□□□ -1.93
PSMC6-215ENST00000557517 PRO0628Q9UI54 55 aa2.95□□□□□ -1.94
PSMC6-215ENST00000557517 PRAC1Q96KF2 57 aa2.81□□□□□ -1.96
PSMC6-215ENST00000557517 KTN1-AS1Q86SY8 53 aa2.77□□□□□ -1.97
PSMC6-215ENST00000557517 MUC19Q7Z5P9 8384 aa2.5□□□□□ -2.01
PSMC6-215ENST00000557517 LUZP6Q538Z0 58 aa2.5□□□□□ -2.01
PSMC6-215ENST00000557517 LCE3DQ9BYE3 92 aa2.5□□□□□ -2.01
PSMC6-215ENST00000557517 PHGR1C9JFL3 82 aa2.24□□□□□ -2.05
PSMC6-215ENST00000557517 KRTAP21-2Q3LI59 83 aa2.15□□□□□ -2.07
PSMC6-215ENST00000557517 INE1O15225 51 aa1.76□□□□□ -2.13
PSMC6-215ENST00000557517 KRTAP21-1Q3LI58 79 aa1.72□□□□□ -2.13
PSMC6-215ENST00000557517 PRM1P04553 51 aa1.68□□□□□ -2.14
PSMC6-215ENST00000557517 MUC16Q8WXI7 14507 aa1.34□□□□□ -2.19
Retrieved 78 of 20,778 RNA–protein pairs in 128 ms