RNA–Protein interactions for RNA: ENST00000557442.5

HNRNPC-232, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 2

Gene HNRNPC, Length 1,308 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-232ENST00000557442 LCE1AQ5T7P2 110 aa4.03□□□□□ -1.76
HNRNPC-232ENST00000557442 C10orf95Q9H7T3 257 aa4.02□□□□□ -1.77
HNRNPC-232ENST00000557442 RPS28P62857 69 aaKnown RBP4□□□□□ -1.77
HNRNPC-232ENST00000557442 KRTAP20-1Q3LI63 56 aa4□□□□□ -1.77
HNRNPC-232ENST00000557442 TNP1P09430 55 aa3.99□□□□□ -1.77
HNRNPC-232ENST00000557442 KRTAP5-11Q6L8G4 156 aa3.99□□□□□ -1.77
HNRNPC-232ENST00000557442 A6NED7 52 aa3.97□□□□□ -1.77
HNRNPC-232ENST00000557442 K7ERS5 55 aa3.97□□□□□ -1.77
HNRNPC-232ENST00000557442 KRTAP19-7Q3SYF9 63 aa3.96□□□□□ -1.77
HNRNPC-232ENST00000557442 SPRR2DP22532 72 aa3.95□□□□□ -1.78
HNRNPC-232ENST00000557442 MT1EP04732 61 aa3.93□□□□□ -1.78
HNRNPC-232ENST00000557442 KRTAP2-3P0C7H8 128 aa3.92□□□□□ -1.78
HNRNPC-232ENST00000557442 KRTAP19-5Q3LI72 72 aa3.92□□□□□ -1.78
HNRNPC-232ENST00000557442 LCE3AQ5TA76 89 aa3.92□□□□□ -1.78
HNRNPC-232ENST00000557442 KRTAP2-4Q9BYR9 128 aa3.92□□□□□ -1.78
HNRNPC-232ENST00000557442 KRTAP19-3Q7Z4W3 81 aa3.86□□□□□ -1.79
HNRNPC-232ENST00000557442 KRTAP25-1Q3LHN0 102 aa3.85□□□□□ -1.79
HNRNPC-232ENST00000557442 KRTAP15-1Q3LI76 137 aa3.82□□□□□ -1.8
HNRNPC-232ENST00000557442 CDC42SE1Q9NRR8 79 aa3.81□□□□□ -1.8
HNRNPC-232ENST00000557442 KRTAP2-2Q9BYT5 123 aa3.8□□□□□ -1.8
HNRNPC-232ENST00000557442 KRTAP2-1Q9BYU5 128 aa3.8□□□□□ -1.8
HNRNPC-232ENST00000557442 MT1GP13640 62 aa3.78□□□□□ -1.8
HNRNPC-232ENST00000557442 SVIPQ8NHG7 77 aa3.78□□□□□ -1.8
HNRNPC-232ENST00000557442 MT1LQ93083 61 aa3.78□□□□□ -1.8
HNRNPC-232ENST00000557442 KRTAP12-3P60328 96 aa3.77□□□□□ -1.81
HNRNPC-232ENST00000557442 PP632Q6XCG6 107 aa3.77□□□□□ -1.81
HNRNPC-232ENST00000557442 DSTQ03001 7570 aaKnown RBP3.74□□□□□ -1.81
HNRNPC-232ENST00000557442 MT1MQ8N339 61 aa3.73□□□□□ -1.81
HNRNPC-232ENST00000557442 ROMO1P60602 79 aa3.72□□□□□ -1.81
HNRNPC-232ENST00000557442 KRTAP23-1A1A580 65 aa3.71□□□□□ -1.81
HNRNPC-232ENST00000557442 KRTAP4-3Q9BYR4 195 aa3.64□□□□□ -1.83
HNRNPC-232ENST00000557442 KRTAP5-1Q6L8H4 278 aa3.63□□□□□ -1.83
HNRNPC-232ENST00000557442 BRK1Q8WUW1 75 aa3.6□□□□□ -1.83
HNRNPC-232ENST00000557442 GPR98Q8WXG9 6306 aa3.58□□□□□ -1.84
HNRNPC-232ENST00000557442 KRTAP5-4Q6L8H1 288 aa3.56□□□□□ -1.84
HNRNPC-232ENST00000557442 LCE1EQ5T753 118 aa3.54□□□□□ -1.84
HNRNPC-232ENST00000557442 KRTAP4-4Q9BYR3 166 aa3.53□□□□□ -1.84
HNRNPC-232ENST00000557442 LCE3CQ5T5A8 94 aa3.47□□□□□ -1.85
HNRNPC-232ENST00000557442 MT4P47944 62 aa3.44□□□□□ -1.86
HNRNPC-232ENST00000557442 KRTAP5-5Q701N2 237 aaPredicted RBP3.39□□□□□ -1.87
HNRNPC-232ENST00000557442 HMCN1Q96RW7 5635 aa3.38□□□□□ -1.87
HNRNPC-232ENST00000557442 PMAIP1Q13794 54 aa3.37□□□□□ -1.87
HNRNPC-232ENST00000557442 KRTAP9-6A8MVA2 160 aa3.27□□□□□ -1.89
HNRNPC-232ENST00000557442 KRTAP12-4P60329 112 aa3.27□□□□□ -1.89
HNRNPC-232ENST00000557442 A0A0A0MQY5 61 aa3.26□□□□□ -1.89
HNRNPC-232ENST00000557442 KRTAP20-2Q3LI61 65 aa3.25□□□□□ -1.89
HNRNPC-232ENST00000557442 PRO0628Q9UI54 55 aa3.25□□□□□ -1.89
HNRNPC-232ENST00000557442 SYNE1Q8NF91 8797 aaKnown RBP3.25□□□□□ -1.89
HNRNPC-232ENST00000557442 SPRR5A0A1B0GTR4 108 aa3.24□□□□□ -1.89
HNRNPC-232ENST00000557442 MT1AP04731 61 aa3.22□□□□□ -1.89
HNRNPC-232ENST00000557442 PRAC1Q96KF2 57 aa3.22□□□□□ -1.89
HNRNPC-232ENST00000557442 KRTAP6-1Q3LI64 71 aa3.19□□□□□ -1.9
HNRNPC-232ENST00000557442 AHNAK2Q8IVF2 5795 aa3.18□□□□□ -1.9
HNRNPC-232ENST00000557442 KRTAP5-10Q6L8G5 202 aa3.11□□□□□ -1.91
HNRNPC-232ENST00000557442 KTN1-AS1Q86SY8 53 aa3.09□□□□□ -1.91
HNRNPC-232ENST00000557442 OBSCNQ5VST9 7968 aa3.08□□□□□ -1.92
HNRNPC-232ENST00000557442 KRTAP5-2Q701N4 177 aa3.05□□□□□ -1.92
HNRNPC-232ENST00000557442 KRTAP6-2Q3LI66 62 aa3.02□□□□□ -1.93
HNRNPC-232ENST00000557442 KRTAP5-7Q6L8G8 165 aa2.96□□□□□ -1.93
HNRNPC-232ENST00000557442 MT3P25713 68 aa2.93□□□□□ -1.94
HNRNPC-232ENST00000557442 KRTAP5-8O75690 187 aa2.82□□□□□ -1.96
HNRNPC-232ENST00000557442 LUZP6Q538Z0 58 aa2.7□□□□□ -1.98
HNRNPC-232ENST00000557442 AHNAKQ09666 5890 aaKnown RBP2.69□□□□□ -1.98
HNRNPC-232ENST00000557442 MUC5ACP98088 5654 aa2.65□□□□□ -1.99
HNRNPC-232ENST00000557442 MUC5BQ9HC84 5762 aaPredicted RBP2.62□□□□□ -1.99
HNRNPC-232ENST00000557442 LCE1FQ5T754 118 aa2.6□□□□□ -1.99
HNRNPC-232ENST00000557442 LCE3DQ9BYE3 92 aa2.54□□□□□ -2
HNRNPC-232ENST00000557442 LCE1BQ5T7P3 118 aa2.5□□□□□ -2.01
HNRNPC-232ENST00000557442 NDUFAF8A1L188 74 aa2.45□□□□□ -2.02
HNRNPC-232ENST00000557442 LCE1CQ5T751 118 aa2.45□□□□□ -2.02
HNRNPC-232ENST00000557442 LCE3EQ5T5B0 92 aa2.42□□□□□ -2.02
HNRNPC-232ENST00000557442 KRTAP21-2Q3LI59 83 aa2.09□□□□□ -2.08
HNRNPC-232ENST00000557442 MUC19Q7Z5P9 8384 aa1.95□□□□□ -2.1
HNRNPC-232ENST00000557442 PRM1P04553 51 aa1.92□□□□□ -2.1
HNRNPC-232ENST00000557442 PHGR1C9JFL3 82 aa1.91□□□□□ -2.1
HNRNPC-232ENST00000557442 INE1O15225 51 aa1.87□□□□□ -2.11
HNRNPC-232ENST00000557442 KRTAP21-1Q3LI58 79 aa1.37□□□□□ -2.19
HNRNPC-232ENST00000557442 MUC16Q8WXI7 14507 aa1.23□□□□□ -2.21
Retrieved 78 of 20,778 RNA–protein pairs in 79.5 ms