RNA–Protein interactions for RNA: ENST00000557400.5

NEDD1-210, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 5

Gene NEDD1, Length 604 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-210ENST00000557400 KRTAP12-1P59990 96 aa5.96□□□□□ -1.46
NEDD1-210ENST00000557400 COA5Q86WW8 74 aa5.93□□□□□ -1.46
NEDD1-210ENST00000557400 A0A1B0GU33 70 aa5.91□□□□□ -1.46
NEDD1-210ENST00000557400 C10orf95Q9H7T3 257 aa5.89□□□□□ -1.47
NEDD1-210ENST00000557400 LCE3AQ5TA76 89 aa5.86□□□□□ -1.47
NEDD1-210ENST00000557400 KRTAP5-7Q6L8G8 165 aa5.86□□□□□ -1.47
NEDD1-210ENST00000557400 SERP2Q8N6R1 65 aa5.83□□□□□ -1.48
NEDD1-210ENST00000557400 KRTAP5-3Q6L8H2 238 aa5.82□□□□□ -1.48
NEDD1-210ENST00000557400 K7ERU9 68 aa5.8□□□□□ -1.48
NEDD1-210ENST00000557400 TNP1P09430 55 aa5.78□□□□□ -1.48
NEDD1-210ENST00000557400 SMIM26A0A096LP01 95 aa5.75□□□□□ -1.49
NEDD1-210ENST00000557400 KRTAP20-2Q3LI61 65 aa5.72□□□□□ -1.49
NEDD1-210ENST00000557400 KRTAP15-1Q3LI76 137 aa5.71□□□□□ -1.5
NEDD1-210ENST00000557400 A8MU10 97 aa5.7□□□□□ -1.5
NEDD1-210ENST00000557400 SPRR5A0A1B0GTR4 108 aa5.66□□□□□ -1.5
NEDD1-210ENST00000557400 A0A1B0GU69 56 aa5.64□□□□□ -1.51
NEDD1-210ENST00000557400 KRTAP12-3P60328 96 aa5.64□□□□□ -1.51
NEDD1-210ENST00000557400 KRTAP5-5Q701N2 237 aaPredicted RBP5.64□□□□□ -1.51
NEDD1-210ENST00000557400 SVIPQ8NHG7 77 aa5.63□□□□□ -1.51
NEDD1-210ENST00000557400 KRTAP12-4P60329 112 aa5.59□□□□□ -1.51
NEDD1-210ENST00000557400 H7BZZ5 65 aa5.55□□□□□ -1.52
NEDD1-210ENST00000557400 COX7CP15954 63 aa5.53□□□□□ -1.52
NEDD1-210ENST00000557400 SYNE1Q8NF91 8797 aaKnown RBP5.49□□□□□ -1.53
NEDD1-210ENST00000557400 PCP4P48539 62 aa5.38□□□□□ -1.55
NEDD1-210ENST00000557400 PRR15LQ9BU68 103 aa5.37□□□□□ -1.55
NEDD1-210ENST00000557400 KRTAP25-1Q3LHN0 102 aa5.28□□□□□ -1.56
NEDD1-210ENST00000557400 KRTAP5-2Q701N4 177 aa5.23□□□□□ -1.57
NEDD1-210ENST00000557400 LINC01558Q9Y6Z2 57 aa5.22□□□□□ -1.57
NEDD1-210ENST00000557400 UQCR11O14957 56 aa5.18□□□□□ -1.58
NEDD1-210ENST00000557400 MT1AP04731 61 aa5.15□□□□□ -1.59
NEDD1-210ENST00000557400 LCE3CQ5T5A8 94 aa5.15□□□□□ -1.59
NEDD1-210ENST00000557400 AHNAKQ09666 5890 aaKnown RBP5.14□□□□□ -1.59
NEDD1-210ENST00000557400 KRTAP5-8O75690 187 aa5.13□□□□□ -1.59
NEDD1-210ENST00000557400 KRTAP6-1Q3LI64 71 aa5.13□□□□□ -1.59
NEDD1-210ENST00000557400 MUC5ACP98088 5654 aa5.13□□□□□ -1.59
NEDD1-210ENST00000557400 A0A0A0MQY5 61 aa5.12□□□□□ -1.59
NEDD1-210ENST00000557400 ATP5EP56381 51 aaPredicted RBP5.12□□□□□ -1.59
NEDD1-210ENST00000557400 ANAPC13Q9BS18 74 aa5.12□□□□□ -1.59
NEDD1-210ENST00000557400 MUC5BQ9HC84 5762 aaPredicted RBP5.07□□□□□ -1.6
NEDD1-210ENST00000557400 CCDC179H3BU77 68 aa5.04□□□□□ -1.6
NEDD1-210ENST00000557400 MIR22HGQ0VDD5 57 aa5.02□□□□□ -1.61
NEDD1-210ENST00000557400 K7ERS5 55 aa5.01□□□□□ -1.61
NEDD1-210ENST00000557400 OBSCNQ5VST9 7968 aa4.99□□□□□ -1.61
NEDD1-210ENST00000557400 KRTAP6-2Q3LI66 62 aa4.98□□□□□ -1.61
NEDD1-210ENST00000557400 KRTAP9-6A8MVA2 160 aa4.87□□□□□ -1.63
NEDD1-210ENST00000557400 TMEM258P61165 79 aa4.83□□□□□ -1.64
NEDD1-210ENST00000557400 KRTAP5-1Q6L8H4 278 aa4.75□□□□□ -1.65
NEDD1-210ENST00000557400 MT3P25713 68 aa4.73□□□□□ -1.65
NEDD1-210ENST00000557400 PSPHP1O15172 72 aa4.72□□□□□ -1.65
NEDD1-210ENST00000557400 RPS28P62857 69 aaKnown RBP4.71□□□□□ -1.66
NEDD1-210ENST00000557400 CDC42SE1Q9NRR8 79 aa4.69□□□□□ -1.66
NEDD1-210ENST00000557400 Q1T7F1 81 aa4.67□□□□□ -1.66
NEDD1-210ENST00000557400 V9GYY9 64 aa4.66□□□□□ -1.66
NEDD1-210ENST00000557400 ROMO1P60602 79 aa4.59□□□□□ -1.67
NEDD1-210ENST00000557400 A6NED7 52 aa4.54□□□□□ -1.68
NEDD1-210ENST00000557400 LCE1EQ5T753 118 aa4.43□□□□□ -1.7
NEDD1-210ENST00000557400 PRAC1Q96KF2 57 aa4.26□□□□□ -1.73
NEDD1-210ENST00000557400 NDUFAF8A1L188 74 aa4.2□□□□□ -1.74
NEDD1-210ENST00000557400 LCE1BQ5T7P3 118 aa4.2□□□□□ -1.74
NEDD1-210ENST00000557400 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.12□□□□□ -1.75
NEDD1-210ENST00000557400 LCE1CQ5T751 118 aa4.11□□□□□ -1.75
NEDD1-210ENST00000557400 KRTAP5-11Q6L8G4 156 aa4.05□□□□□ -1.76
NEDD1-210ENST00000557400 LCE1FQ5T754 118 aa3.97□□□□□ -1.77
NEDD1-210ENST00000557400 LCE3DQ9BYE3 92 aa3.64□□□□□ -1.83
NEDD1-210ENST00000557400 PHGR1C9JFL3 82 aa3.54□□□□□ -1.84
NEDD1-210ENST00000557400 KRTAP4-4Q9BYR3 166 aa3.44□□□□□ -1.86
NEDD1-210ENST00000557400 LCE3EQ5T5B0 92 aa3.43□□□□□ -1.86
NEDD1-210ENST00000557400 BRK1Q8WUW1 75 aa3.43□□□□□ -1.86
NEDD1-210ENST00000557400 KRTAP21-2Q3LI59 83 aa3.38□□□□□ -1.87
NEDD1-210ENST00000557400 PMAIP1Q13794 54 aa3.19□□□□□ -1.9
NEDD1-210ENST00000557400 MUC19Q7Z5P9 8384 aa3.1□□□□□ -1.91
NEDD1-210ENST00000557400 LUZP6Q538Z0 58 aa2.78□□□□□ -1.96
NEDD1-210ENST00000557400 KRTAP21-1Q3LI58 79 aa2.7□□□□□ -1.98
NEDD1-210ENST00000557400 KTN1-AS1Q86SY8 53 aa2.56□□□□□ -2
NEDD1-210ENST00000557400 PRO0628Q9UI54 55 aa2.54□□□□□ -2
NEDD1-210ENST00000557400 PRM1P04553 51 aa2.32□□□□□ -2.04
NEDD1-210ENST00000557400 MUC16Q8WXI7 14507 aa2.19□□□□□ -2.06
NEDD1-210ENST00000557400 INE1O15225 51 aa1.28□□□□□ -2.2
Retrieved 78 of 20,778 RNA–protein pairs in 44.6 ms