RNA–Protein interactions for RNA: ENST00000557358.1

VPS33B-206, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 4

Gene VPS33B, Length 561 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-206ENST00000557358 KRTAP19-7Q3SYF9 63 aa5.13□□□□□ -1.59
VPS33B-206ENST00000557358 MT1EP04732 61 aa5.12□□□□□ -1.59
VPS33B-206ENST00000557358 KRTAP25-1Q3LHN0 102 aa5.11□□□□□ -1.59
VPS33B-206ENST00000557358 KRTAP19-3Q7Z4W3 81 aa5.09□□□□□ -1.59
VPS33B-206ENST00000557358 PMAIP1Q13794 54 aa5.08□□□□□ -1.6
VPS33B-206ENST00000557358 KRTAP19-5Q3LI72 72 aa5.07□□□□□ -1.6
VPS33B-206ENST00000557358 LCE5AQ5TCM9 118 aa5.05□□□□□ -1.6
VPS33B-206ENST00000557358 PP632Q6XCG6 107 aa5.04□□□□□ -1.6
VPS33B-206ENST00000557358 LCE3AQ5TA76 89 aa5.02□□□□□ -1.61
VPS33B-206ENST00000557358 MT1GP13640 62 aa5.01□□□□□ -1.61
VPS33B-206ENST00000557358 KRTAP23-1A1A580 65 aa4.93□□□□□ -1.62
VPS33B-206ENST00000557358 MT1LQ93083 61 aa4.91□□□□□ -1.62
VPS33B-206ENST00000557358 DSTQ03001 7570 aaKnown RBP4.9□□□□□ -1.62
VPS33B-206ENST00000557358 KRTAP12-3P60328 96 aa4.87□□□□□ -1.63
VPS33B-206ENST00000557358 MT1MQ8N339 61 aa4.86□□□□□ -1.63
VPS33B-206ENST00000557358 KTN1-AS1Q86SY8 53 aa4.82□□□□□ -1.64
VPS33B-206ENST00000557358 PRAC1Q96KF2 57 aa4.78□□□□□ -1.64
VPS33B-206ENST00000557358 LCE4AQ5TA78 99 aa4.71□□□□□ -1.66
VPS33B-206ENST00000557358 KRTAP4-9Q9BYQ8 210 aa4.7□□□□□ -1.66
VPS33B-206ENST00000557358 KRTAP19-4Q3LI73 84 aa4.69□□□□□ -1.66
VPS33B-206ENST00000557358 KRTAP4-3Q9BYR4 195 aa4.69□□□□□ -1.66
VPS33B-206ENST00000557358 GPR98Q8WXG9 6306 aa4.66□□□□□ -1.66
VPS33B-206ENST00000557358 KRTAP15-1Q3LI76 137 aa4.63□□□□□ -1.67
VPS33B-206ENST00000557358 LCE1DQ5T752 114 aa4.62□□□□□ -1.67
VPS33B-206ENST00000557358 KRTAP4-7Q9BYR0 210 aa4.62□□□□□ -1.67
VPS33B-206ENST00000557358 MT4P47944 62 aa4.61□□□□□ -1.67
VPS33B-206ENST00000557358 SVIPQ8NHG7 77 aa4.56□□□□□ -1.68
VPS33B-206ENST00000557358 KRTAP5-4Q6L8H1 288 aa4.55□□□□□ -1.68
VPS33B-206ENST00000557358 HMCN1Q96RW7 5635 aa4.51□□□□□ -1.69
VPS33B-206ENST00000557358 LCE3CQ5T5A8 94 aa4.48□□□□□ -1.69
VPS33B-206ENST00000557358 KRTAP4-6Q9BYQ5 205 aa4.43□□□□□ -1.7
VPS33B-206ENST00000557358 KRTAP12-4P60329 112 aa4.42□□□□□ -1.7
VPS33B-206ENST00000557358 KRTAP5-5Q701N2 237 aaPredicted RBP4.41□□□□□ -1.7
VPS33B-206ENST00000557358 LOC100996750A0A140TA64 210 aa4.37□□□□□ -1.71
VPS33B-206ENST00000557358 SPRR5A0A1B0GTR4 108 aa4.35□□□□□ -1.71
VPS33B-206ENST00000557358 AHNAK2Q8IVF2 5795 aa4.32□□□□□ -1.72
VPS33B-206ENST00000557358 KRTAP20-2Q3LI61 65 aa4.32□□□□□ -1.72
VPS33B-206ENST00000557358 SYNE1Q8NF91 8797 aaKnown RBP4.21□□□□□ -1.74
VPS33B-206ENST00000557358 KRTAP5-10Q6L8G5 202 aa4.21□□□□□ -1.74
VPS33B-206ENST00000557358 MT1AP04731 61 aa4.2□□□□□ -1.74
VPS33B-206ENST00000557358 KRTAP9-6A8MVA2 160 aa4.18□□□□□ -1.74
VPS33B-206ENST00000557358 KRTAP5-3Q6L8H2 238 aa4.17□□□□□ -1.74
VPS33B-206ENST00000557358 KRTAP6-1Q3LI64 71 aa4.13□□□□□ -1.75
VPS33B-206ENST00000557358 KRTAP5-7Q6L8G8 165 aa4.07□□□□□ -1.76
VPS33B-206ENST00000557358 KRTAP9-4Q9BYQ2 154 aa4.05□□□□□ -1.76
VPS33B-206ENST00000557358 KRTAP5-2Q701N4 177 aa4□□□□□ -1.77
VPS33B-206ENST00000557358 KRTAP6-2Q3LI66 62 aa3.95□□□□□ -1.78
VPS33B-206ENST00000557358 LUZP6Q538Z0 58 aa3.95□□□□□ -1.78
VPS33B-206ENST00000557358 KRTAP4-11Q9BYQ6 195 aa3.94□□□□□ -1.78
VPS33B-206ENST00000557358 MT3P25713 68 aa3.89□□□□□ -1.79
VPS33B-206ENST00000557358 KRTAP5-8O75690 187 aa3.75□□□□□ -1.81
VPS33B-206ENST00000557358 OBSCNQ5VST9 7968 aa3.74□□□□□ -1.81
VPS33B-206ENST00000557358 NDUFAF8A1L188 74 aa3.67□□□□□ -1.82
VPS33B-206ENST00000557358 KRTAP9-9Q9BYP9 154 aa3.65□□□□□ -1.83
VPS33B-206ENST00000557358 AHNAKQ09666 5890 aaKnown RBP3.57□□□□□ -1.84
VPS33B-206ENST00000557358 KRTAP5-1Q6L8H4 278 aa3.56□□□□□ -1.84
VPS33B-206ENST00000557358 MUC5ACP98088 5654 aa3.55□□□□□ -1.84
VPS33B-206ENST00000557358 MUC5BQ9HC84 5762 aaPredicted RBP3.53□□□□□ -1.84
VPS33B-206ENST00000557358 LCE1EQ5T753 118 aa3.52□□□□□ -1.85
VPS33B-206ENST00000557358 LCE1BQ5T7P3 118 aa3.32□□□□□ -1.88
VPS33B-206ENST00000557358 LCE3DQ9BYE3 92 aa3.31□□□□□ -1.88
VPS33B-206ENST00000557358 LCE1CQ5T751 118 aa3.25□□□□□ -1.89
VPS33B-206ENST00000557358 KRTAP4-2Q9BYR5 136 aa3.24□□□□□ -1.89
VPS33B-206ENST00000557358 A0A0A0MQY5 61 aa3.19□□□□□ -1.9
VPS33B-206ENST00000557358 LCE3EQ5T5B0 92 aa3.19□□□□□ -1.9
VPS33B-206ENST00000557358 INE1O15225 51 aa3.04□□□□□ -1.92
VPS33B-206ENST00000557358 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.95□□□□□ -1.94
VPS33B-206ENST00000557358 KRTAP5-11Q6L8G4 156 aa2.93□□□□□ -1.94
VPS33B-206ENST00000557358 KRTAP4-12Q9BQ66 201 aa2.92□□□□□ -1.94
VPS33B-206ENST00000557358 LCE1FQ5T754 118 aa2.87□□□□□ -1.95
VPS33B-206ENST00000557358 H3BS24 57 aa2.77□□□□□ -1.97
VPS33B-206ENST00000557358 KRTAP21-2Q3LI59 83 aa2.69□□□□□ -1.98
VPS33B-206ENST00000557358 PRM1P04553 51 aa2.67□□□□□ -1.98
VPS33B-206ENST00000557358 PHGR1C9JFL3 82 aa2.51□□□□□ -2.01
VPS33B-206ENST00000557358 KRTAP4-4Q9BYR3 166 aa2.47□□□□□ -2.01
VPS33B-206ENST00000557358 MUC19Q7Z5P9 8384 aa2.3□□□□□ -2.04
VPS33B-206ENST00000557358 KRTAP21-1Q3LI58 79 aa1.92□□□□□ -2.1
VPS33B-206ENST00000557358 MUC16Q8WXI7 14507 aa1.67□□□□□ -2.14
Retrieved 78 of 20,778 RNA–protein pairs in 50 ms