RNA–Protein interactions for RNA: ENST00000557349.5

TVP23C-CDRT4-204, Transcript of TVP23C-CDRT4 readthrough, humanhuman

TSL 2

Gene TVP23C-CDRT4, Length 1,005 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23C-CDRT4-204ENST00000557349 Q1T7F1 81 aa6.26□□□□□ -1.41
TVP23C-CDRT4-204ENST00000557349 KRTAP4-2Q9BYR5 136 aa6.26□□□□□ -1.41
TVP23C-CDRT4-204ENST00000557349 KRTAP19-7Q3SYF9 63 aa6.25□□□□□ -1.41
TVP23C-CDRT4-204ENST00000557349 PCP4P48539 62 aa6.23□□□□□ -1.41
TVP23C-CDRT4-204ENST00000557349 MT1EP04732 61 aa6.21□□□□□ -1.42
TVP23C-CDRT4-204ENST00000557349 KRTAP19-5Q3LI72 72 aa6.18□□□□□ -1.42
TVP23C-CDRT4-204ENST00000557349 LCE5AQ5TCM9 118 aa6.18□□□□□ -1.42
TVP23C-CDRT4-204ENST00000557349 K7ERS5 55 aa6.17□□□□□ -1.42
TVP23C-CDRT4-204ENST00000557349 KRTAP4-11Q9BYQ6 195 aa6.17□□□□□ -1.42
TVP23C-CDRT4-204ENST00000557349 LCE3AQ5TA76 89 aa6.15□□□□□ -1.42
TVP23C-CDRT4-204ENST00000557349 KRTAP19-3Q7Z4W3 81 aa6.13□□□□□ -1.43
TVP23C-CDRT4-204ENST00000557349 KRTAP2-2Q9BYT5 123 aa6.13□□□□□ -1.43
TVP23C-CDRT4-204ENST00000557349 KRTAP2-1Q9BYU5 128 aa6.13□□□□□ -1.43
TVP23C-CDRT4-204ENST00000557349 A6NED7 52 aa6.1□□□□□ -1.43
TVP23C-CDRT4-204ENST00000557349 RPS28P62857 69 aaKnown RBP6.08□□□□□ -1.44
TVP23C-CDRT4-204ENST00000557349 KRTAP25-1Q3LHN0 102 aa6□□□□□ -1.45
TVP23C-CDRT4-204ENST00000557349 MT1GP13640 62 aa5.99□□□□□ -1.45
TVP23C-CDRT4-204ENST00000557349 PP632Q6XCG6 107 aa5.99□□□□□ -1.45
TVP23C-CDRT4-204ENST00000557349 MT1LQ93083 61 aa5.97□□□□□ -1.45
TVP23C-CDRT4-204ENST00000557349 KRTAP23-1A1A580 65 aa5.92□□□□□ -1.46
TVP23C-CDRT4-204ENST00000557349 KRTAP12-3P60328 96 aa5.91□□□□□ -1.46
TVP23C-CDRT4-204ENST00000557349 MT1MQ8N339 61 aa5.9□□□□□ -1.46
TVP23C-CDRT4-204ENST00000557349 CDC42SE1Q9NRR8 79 aa5.86□□□□□ -1.47
TVP23C-CDRT4-204ENST00000557349 DSTQ03001 7570 aaKnown RBP5.85□□□□□ -1.47
TVP23C-CDRT4-204ENST00000557349 ROMO1P60602 79 aa5.75□□□□□ -1.49
TVP23C-CDRT4-204ENST00000557349 KRTAP4-3Q9BYR4 195 aa5.75□□□□□ -1.49
TVP23C-CDRT4-204ENST00000557349 KRTAP15-1Q3LI76 137 aa5.62□□□□□ -1.51
TVP23C-CDRT4-204ENST00000557349 KRTAP5-3Q6L8H2 238 aa5.57□□□□□ -1.52
TVP23C-CDRT4-204ENST00000557349 SVIPQ8NHG7 77 aa5.56□□□□□ -1.52
TVP23C-CDRT4-204ENST00000557349 MT4P47944 62 aa5.52□□□□□ -1.53
TVP23C-CDRT4-204ENST00000557349 KRTAP5-4Q6L8H1 288 aa5.48□□□□□ -1.53
TVP23C-CDRT4-204ENST00000557349 LCE3CQ5T5A8 94 aa5.45□□□□□ -1.54
TVP23C-CDRT4-204ENST00000557349 BRK1Q8WUW1 75 aa5.45□□□□□ -1.54
TVP23C-CDRT4-204ENST00000557349 HMCN1Q96RW7 5635 aa5.37□□□□□ -1.55
TVP23C-CDRT4-204ENST00000557349 KRTAP5-5Q701N2 237 aaPredicted RBP5.36□□□□□ -1.55
TVP23C-CDRT4-204ENST00000557349 GPR98Q8WXG9 6306 aa5.24□□□□□ -1.57
TVP23C-CDRT4-204ENST00000557349 KRTAP12-4P60329 112 aa5.22□□□□□ -1.57
TVP23C-CDRT4-204ENST00000557349 KRTAP20-2Q3LI61 65 aa5.19□□□□□ -1.58
TVP23C-CDRT4-204ENST00000557349 SPRR5A0A1B0GTR4 108 aa5.17□□□□□ -1.58
TVP23C-CDRT4-204ENST00000557349 SYNE1Q8NF91 8797 aaKnown RBP5.11□□□□□ -1.59
TVP23C-CDRT4-204ENST00000557349 KRTAP9-6A8MVA2 160 aa5.11□□□□□ -1.59
TVP23C-CDRT4-204ENST00000557349 PMAIP1Q13794 54 aa5.11□□□□□ -1.59
TVP23C-CDRT4-204ENST00000557349 MT1AP04731 61 aa5.09□□□□□ -1.59
TVP23C-CDRT4-204ENST00000557349 AHNAK2Q8IVF2 5795 aa5.08□□□□□ -1.6
TVP23C-CDRT4-204ENST00000557349 KRTAP6-1Q3LI64 71 aa5.04□□□□□ -1.6
TVP23C-CDRT4-204ENST00000557349 KRTAP5-10Q6L8G5 202 aa5.02□□□□□ -1.61
TVP23C-CDRT4-204ENST00000557349 PRAC1Q96KF2 57 aa4.88□□□□□ -1.63
TVP23C-CDRT4-204ENST00000557349 PRO0628Q9UI54 55 aa4.86□□□□□ -1.63
TVP23C-CDRT4-204ENST00000557349 KRTAP5-2Q701N4 177 aa4.84□□□□□ -1.63
TVP23C-CDRT4-204ENST00000557349 KRTAP5-7Q6L8G8 165 aa4.79□□□□□ -1.64
TVP23C-CDRT4-204ENST00000557349 KRTAP6-2Q3LI66 62 aa4.78□□□□□ -1.64
TVP23C-CDRT4-204ENST00000557349 MT3P25713 68 aa4.64□□□□□ -1.67
TVP23C-CDRT4-204ENST00000557349 KTN1-AS1Q86SY8 53 aa4.64□□□□□ -1.67
TVP23C-CDRT4-204ENST00000557349 A0A0A0MQY5 61 aa4.55□□□□□ -1.68
TVP23C-CDRT4-204ENST00000557349 KRTAP5-8O75690 187 aa4.51□□□□□ -1.69
TVP23C-CDRT4-204ENST00000557349 OBSCNQ5VST9 7968 aa4.46□□□□□ -1.7
TVP23C-CDRT4-204ENST00000557349 KRTAP5-1Q6L8H4 278 aa4.3□□□□□ -1.72
TVP23C-CDRT4-204ENST00000557349 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.2□□□□□ -1.74
TVP23C-CDRT4-204ENST00000557349 LCE1EQ5T753 118 aa4.19□□□□□ -1.74
TVP23C-CDRT4-204ENST00000557349 MUC5ACP98088 5654 aa4.15□□□□□ -1.74
TVP23C-CDRT4-204ENST00000557349 KRTAP5-11Q6L8G4 156 aa4.15□□□□□ -1.75
TVP23C-CDRT4-204ENST00000557349 MUC5BQ9HC84 5762 aaPredicted RBP4.15□□□□□ -1.75
TVP23C-CDRT4-204ENST00000557349 LUZP6Q538Z0 58 aa4.14□□□□□ -1.75
TVP23C-CDRT4-204ENST00000557349 AHNAKQ09666 5890 aaKnown RBP4.11□□□□□ -1.75
TVP23C-CDRT4-204ENST00000557349 LCE1BQ5T7P3 118 aa3.98□□□□□ -1.77
TVP23C-CDRT4-204ENST00000557349 LCE3DQ9BYE3 92 aa3.97□□□□□ -1.77
TVP23C-CDRT4-204ENST00000557349 LCE1FQ5T754 118 aa3.93□□□□□ -1.78
TVP23C-CDRT4-204ENST00000557349 LCE1CQ5T751 118 aa3.9□□□□□ -1.79
TVP23C-CDRT4-204ENST00000557349 LCE3EQ5T5B0 92 aa3.77□□□□□ -1.81
TVP23C-CDRT4-204ENST00000557349 NDUFAF8A1L188 74 aa3.71□□□□□ -1.82
TVP23C-CDRT4-204ENST00000557349 KRTAP4-4Q9BYR3 166 aa3.48□□□□□ -1.85
TVP23C-CDRT4-204ENST00000557349 KRTAP21-2Q3LI59 83 aa3.3□□□□□ -1.88
TVP23C-CDRT4-204ENST00000557349 PHGR1C9JFL3 82 aa3.03□□□□□ -1.92
TVP23C-CDRT4-204ENST00000557349 INE1O15225 51 aa2.96□□□□□ -1.94
TVP23C-CDRT4-204ENST00000557349 PRM1P04553 51 aa2.96□□□□□ -1.94
TVP23C-CDRT4-204ENST00000557349 MUC19Q7Z5P9 8384 aa2.73□□□□□ -1.97
TVP23C-CDRT4-204ENST00000557349 KRTAP21-1Q3LI58 79 aa2.22□□□□□ -2.05
TVP23C-CDRT4-204ENST00000557349 MUC16Q8WXI7 14507 aa1.94□□□□□ -2.1
Retrieved 78 of 20,778 RNA–protein pairs in 10.8 ms