RNA–Protein interactions for RNA: ENST00000557311.5

ATXN3-247, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 562 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-247ENST00000557311 IGFL1Q6UW32 110 aa2.51□□□□□ -2.01
ATXN3-247ENST00000557311 KRTAP6-3Q3LI67 103 aa2.49□□□□□ -2.01
ATXN3-247ENST00000557311 H0YAA0 97 aa2.48□□□□□ -2.01
ATXN3-247ENST00000557311 PRO2289Q9P1D8 64 aa2.48□□□□□ -2.01
ATXN3-247ENST00000557311 LCE3AQ5TA76 89 aa2.47□□□□□ -2.01
ATXN3-247ENST00000557311 SYNE2Q8WXH0 6885 aaKnown RBP2.46□□□□□ -2.02
ATXN3-247ENST00000557311 MT2AP02795 61 aa2.46□□□□□ -2.02
ATXN3-247ENST00000557311 SPRR1BP22528 89 aa2.46□□□□□ -2.02
ATXN3-247ENST00000557311 KRTAP19-6Q3LI70 58 aa2.46□□□□□ -2.02
ATXN3-247ENST00000557311 H1FX-AS1Q4G0G2 97 aa2.45□□□□□ -2.02
ATXN3-247ENST00000557311 MACF1Q9UPN3 7388 aaKnown RBP2.44□□□□□ -2.02
ATXN3-247ENST00000557311 MT1FP04733 61 aa2.44□□□□□ -2.02
ATXN3-247ENST00000557311 KRTAP10-10P60014 251 aa2.44□□□□□ -2.02
ATXN3-247ENST00000557311 PLAC4Q8WY50 150 aa2.43□□□□□ -2.02
ATXN3-247ENST00000557311 R4GN34 69 aa2.42□□□□□ -2.02
ATXN3-247ENST00000557311 KRTAP20-1Q3LI63 56 aa2.4□□□□□ -2.03
ATXN3-247ENST00000557311 C10orf95Q9H7T3 257 aa2.37□□□□□ -2.03
ATXN3-247ENST00000557311 NEBP20929 6669 aa2.37□□□□□ -2.03
ATXN3-247ENST00000557311 INE1O15225 51 aa2.35□□□□□ -2.03
ATXN3-247ENST00000557311 MUC12Q9UKN1 5478 aa2.32□□□□□ -2.04
ATXN3-247ENST00000557311 KRTAP5-5Q701N2 237 aaPredicted RBP2.31□□□□□ -2.04
ATXN3-247ENST00000557311 KRTAP2-3P0C7H8 128 aa2.3□□□□□ -2.04
ATXN3-247ENST00000557311 KRTAP2-4Q9BYR9 128 aa2.3□□□□□ -2.04
ATXN3-247ENST00000557311 KMT2DO14686 5537 aa2.25□□□□□ -2.05
ATXN3-247ENST00000557311 S4R3F8 94 aa2.24□□□□□ -2.05
ATXN3-247ENST00000557311 A0A0D9SG42 100 aa2.23□□□□□ -2.05
ATXN3-247ENST00000557311 PP632Q6XCG6 107 aa2.23□□□□□ -2.05
ATXN3-247ENST00000557311 KRTAP2-1Q9BYU5 128 aa2.21□□□□□ -2.06
ATXN3-247ENST00000557311 MDN1Q9NU22 5596 aa2.2□□□□□ -2.06
ATXN3-247ENST00000557311 MT1BP07438 61 aa2.18□□□□□ -2.06
ATXN3-247ENST00000557311 LCE1CQ5T751 118 aa2.17□□□□□ -2.06
ATXN3-247ENST00000557311 LCE1BQ5T7P3 118 aa2.17□□□□□ -2.06
ATXN3-247ENST00000557311 SPRR2EP22531 72 aa2.16□□□□□ -2.06
ATXN3-247ENST00000557311 SPRR2BP35325 72 aa2.16□□□□□ -2.06
ATXN3-247ENST00000557311 SPRR2AP35326 72 aa2.16□□□□□ -2.06
ATXN3-247ENST00000557311 KRTAP19-8Q3LI54 63 aa2.16□□□□□ -2.06
ATXN3-247ENST00000557311 SPRR2FQ96RM1 72 aa2.14□□□□□ -2.07
ATXN3-247ENST00000557311 SPRR2GQ9BYE4 73 aa2.14□□□□□ -2.07
ATXN3-247ENST00000557311 KRTAP12-1P59990 96 aa2.11□□□□□ -2.07
ATXN3-247ENST00000557311 KRTAP13-4Q3LI77 160 aa2.11□□□□□ -2.07
ATXN3-247ENST00000557311 SPRR2DP22532 72 aa2.1□□□□□ -2.07
ATXN3-247ENST00000557311 GPR98Q8WXG9 6306 aa2.1□□□□□ -2.07
ATXN3-247ENST00000557311 SPRR5A0A1B0GTR4 108 aa2.08□□□□□ -2.08
ATXN3-247ENST00000557311 KRTAP5-8O75690 187 aa2.08□□□□□ -2.08
ATXN3-247ENST00000557311 KRTAP8-1Q8IUC2 63 aa2.07□□□□□ -2.08
ATXN3-247ENST00000557311 LCE3DQ9BYE3 92 aa2.07□□□□□ -2.08
ATXN3-247ENST00000557311 M0QZ58 72 aa2.06□□□□□ -2.08
ATXN3-247ENST00000557311 MT1XP80297 61 aa1.99□□□□□ -2.09
ATXN3-247ENST00000557311 DSTQ03001 7570 aaKnown RBP1.88□□□□□ -2.11
ATXN3-247ENST00000557311 KRTAP5-10Q6L8G5 202 aa1.88□□□□□ -2.11
ATXN3-247ENST00000557311 TNP1P09430 55 aa1.87□□□□□ -2.11
ATXN3-247ENST00000557311 MUC19Q7Z5P9 8384 aa1.85□□□□□ -2.11
ATXN3-247ENST00000557311 MT4P47944 62 aa1.85□□□□□ -2.11
ATXN3-247ENST00000557311 KRTAP5-7Q6L8G8 165 aa1.85□□□□□ -2.11
ATXN3-247ENST00000557311 HMCN1Q96RW7 5635 aa1.83□□□□□ -2.12
ATXN3-247ENST00000557311 AHNAK2Q8IVF2 5795 aa1.83□□□□□ -2.12
ATXN3-247ENST00000557311 KRTAP19-3Q7Z4W3 81 aa1.82□□□□□ -2.12
ATXN3-247ENST00000557311 KRTAP19-7Q3SYF9 63 aa1.79□□□□□ -2.12
ATXN3-247ENST00000557311 MT1EP04732 61 aa1.78□□□□□ -2.12
ATXN3-247ENST00000557311 MT1GP13640 62 aa1.77□□□□□ -2.13
ATXN3-247ENST00000557311 MT1MQ8N339 61 aa1.71□□□□□ -2.14
ATXN3-247ENST00000557311 KRTAP19-5Q3LI72 72 aa1.69□□□□□ -2.14
ATXN3-247ENST00000557311 KRTAP20-2Q3LI61 65 aa1.68□□□□□ -2.14
ATXN3-247ENST00000557311 MT1LQ93083 61 aa1.66□□□□□ -2.14
ATXN3-247ENST00000557311 KRTAP12-4P60329 112 aa1.64□□□□□ -2.15
ATXN3-247ENST00000557311 KRTAP21-2Q3LI59 83 aa1.59□□□□□ -2.15
ATXN3-247ENST00000557311 AHNAKQ09666 5890 aaKnown RBP1.57□□□□□ -2.16
ATXN3-247ENST00000557311 KRTAP12-3P60328 96 aa1.57□□□□□ -2.16
ATXN3-247ENST00000557311 MUC5ACP98088 5654 aa1.56□□□□□ -2.16
ATXN3-247ENST00000557311 MUC5BQ9HC84 5762 aaPredicted RBP1.55□□□□□ -2.16
ATXN3-247ENST00000557311 SYNE1Q8NF91 8797 aaKnown RBP1.53□□□□□ -2.16
ATXN3-247ENST00000557311 MT1AP04731 61 aa1.42□□□□□ -2.18
ATXN3-247ENST00000557311 KRTAP6-1Q3LI64 71 aa1.41□□□□□ -2.18
ATXN3-247ENST00000557311 KRTAP6-2Q3LI66 62 aa1.4□□□□□ -2.19
ATXN3-247ENST00000557311 PRM1P04553 51 aa1.37□□□□□ -2.19
ATXN3-247ENST00000557311 PHGR1C9JFL3 82 aa1.11□□□□□ -2.23
ATXN3-247ENST00000557311 KRTAP21-1Q3LI58 79 aa0.92□□□□□ -2.26
ATXN3-247ENST00000557311 MUC16Q8WXI7 14507 aa0.78□□□□□ -2.28
Retrieved 78 of 20,778 RNA–protein pairs in 79 ms