RNA–Protein interactions for RNA: ENST00000556742.1

IFT43-212, Transcript of intraflagellar transport 43, humanhuman

TSL 2 BASIC

Gene IFT43, Length 848 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT43-212ENST00000556742 KRTAP2-2Q9BYT5 123 aa4.02□□□□□ -1.77
IFT43-212ENST00000556742 KRTAP2-1Q9BYU5 128 aa4.02□□□□□ -1.77
IFT43-212ENST00000556742 UQCR11O14957 56 aa4.01□□□□□ -1.77
IFT43-212ENST00000556742 MT1EP04732 61 aa3.99□□□□□ -1.77
IFT43-212ENST00000556742 TNP1P09430 55 aa3.96□□□□□ -1.78
IFT43-212ENST00000556742 C10orf95Q9H7T3 257 aa3.96□□□□□ -1.78
IFT43-212ENST00000556742 KRTAP19-3Q7Z4W3 81 aa3.95□□□□□ -1.78
IFT43-212ENST00000556742 KRTAP19-5Q3LI72 72 aa3.93□□□□□ -1.78
IFT43-212ENST00000556742 V9GYY9 64 aa3.93□□□□□ -1.78
IFT43-212ENST00000556742 KRTAP15-1Q3LI76 137 aa3.91□□□□□ -1.78
IFT43-212ENST00000556742 DSTQ03001 7570 aaKnown RBP3.91□□□□□ -1.78
IFT43-212ENST00000556742 MIR22HGQ0VDD5 57 aa3.9□□□□□ -1.79
IFT43-212ENST00000556742 Q1T7F1 81 aa3.9□□□□□ -1.79
IFT43-212ENST00000556742 KRTAP23-1A1A580 65 aa3.88□□□□□ -1.79
IFT43-212ENST00000556742 MT1GP13640 62 aa3.88□□□□□ -1.79
IFT43-212ENST00000556742 LCE3AQ5TA76 89 aa3.88□□□□□ -1.79
IFT43-212ENST00000556742 PP632Q6XCG6 107 aa3.85□□□□□ -1.79
IFT43-212ENST00000556742 PSPHP1O15172 72 aa3.84□□□□□ -1.79
IFT43-212ENST00000556742 K7ERS5 55 aa3.83□□□□□ -1.8
IFT43-212ENST00000556742 MT1LQ93083 61 aa3.83□□□□□ -1.8
IFT43-212ENST00000556742 MT1MQ8N339 61 aa3.8□□□□□ -1.8
IFT43-212ENST00000556742 KRTAP25-1Q3LHN0 102 aa3.79□□□□□ -1.8
IFT43-212ENST00000556742 KRTAP5-11Q6L8G4 156 aa3.79□□□□□ -1.8
IFT43-212ENST00000556742 RPS28P62857 69 aaKnown RBP3.77□□□□□ -1.81
IFT43-212ENST00000556742 KRTAP12-3P60328 96 aa3.75□□□□□ -1.81
IFT43-212ENST00000556742 A6NED7 52 aa3.74□□□□□ -1.81
IFT43-212ENST00000556742 PCP4P48539 62 aa3.74□□□□□ -1.81
IFT43-212ENST00000556742 SVIPQ8NHG7 77 aa3.73□□□□□ -1.81
IFT43-212ENST00000556742 KRTAP4-3Q9BYR4 195 aa3.66□□□□□ -1.82
IFT43-212ENST00000556742 CDC42SE1Q9NRR8 79 aa3.63□□□□□ -1.83
IFT43-212ENST00000556742 KRTAP5-4Q6L8H1 288 aa3.6□□□□□ -1.83
IFT43-212ENST00000556742 HMCN1Q96RW7 5635 aa3.59□□□□□ -1.84
IFT43-212ENST00000556742 AHNAK2Q8IVF2 5795 aa3.58□□□□□ -1.84
IFT43-212ENST00000556742 ROMO1P60602 79 aa3.57□□□□□ -1.84
IFT43-212ENST00000556742 MT4P47944 62 aa3.54□□□□□ -1.84
IFT43-212ENST00000556742 KRTAP5-1Q6L8H4 278 aa3.5□□□□□ -1.85
IFT43-212ENST00000556742 SPRR5A0A1B0GTR4 108 aa3.49□□□□□ -1.85
IFT43-212ENST00000556742 KRTAP5-5Q701N2 237 aaPredicted RBP3.49□□□□□ -1.85
IFT43-212ENST00000556742 LCE3CQ5T5A8 94 aa3.47□□□□□ -1.85
IFT43-212ENST00000556742 KRTAP5-10Q6L8G5 202 aa3.47□□□□□ -1.85
IFT43-212ENST00000556742 KRTAP5-7Q6L8G8 165 aa3.45□□□□□ -1.86
IFT43-212ENST00000556742 KRTAP4-4Q9BYR3 166 aa3.42□□□□□ -1.86
IFT43-212ENST00000556742 KRTAP12-4P60329 112 aa3.37□□□□□ -1.87
IFT43-212ENST00000556742 KRTAP20-2Q3LI61 65 aa3.37□□□□□ -1.87
IFT43-212ENST00000556742 SYNE1Q8NF91 8797 aaKnown RBP3.31□□□□□ -1.88
IFT43-212ENST00000556742 LCE1EQ5T753 118 aa3.29□□□□□ -1.88
IFT43-212ENST00000556742 BRK1Q8WUW1 75 aa3.27□□□□□ -1.89
IFT43-212ENST00000556742 MT1AP04731 61 aa3.26□□□□□ -1.89
IFT43-212ENST00000556742 AHNAKQ09666 5890 aaKnown RBP3.26□□□□□ -1.89
IFT43-212ENST00000556742 KRTAP9-6A8MVA2 160 aa3.25□□□□□ -1.89
IFT43-212ENST00000556742 KRTAP6-1Q3LI64 71 aa3.22□□□□□ -1.89
IFT43-212ENST00000556742 KRTAP5-2Q701N4 177 aa3.16□□□□□ -1.9
IFT43-212ENST00000556742 MUC5BQ9HC84 5762 aaPredicted RBP3.1□□□□□ -1.91
IFT43-212ENST00000556742 PMAIP1Q13794 54 aa3.09□□□□□ -1.91
IFT43-212ENST00000556742 MUC5ACP98088 5654 aa3.07□□□□□ -1.92
IFT43-212ENST00000556742 KRTAP6-2Q3LI66 62 aa3.06□□□□□ -1.92
IFT43-212ENST00000556742 MT3P25713 68 aa2.99□□□□□ -1.93
IFT43-212ENST00000556742 OBSCNQ5VST9 7968 aa2.99□□□□□ -1.93
IFT43-212ENST00000556742 A0A0A0MQY5 61 aa2.95□□□□□ -1.94
IFT43-212ENST00000556742 KRTAP5-8O75690 187 aa2.95□□□□□ -1.94
IFT43-212ENST00000556742 PRAC1Q96KF2 57 aa2.92□□□□□ -1.94
IFT43-212ENST00000556742 PRO0628Q9UI54 55 aa2.92□□□□□ -1.94
IFT43-212ENST00000556742 KTN1-AS1Q86SY8 53 aa2.79□□□□□ -1.96
IFT43-212ENST00000556742 LCE1FQ5T754 118 aa2.62□□□□□ -1.99
IFT43-212ENST00000556742 LCE1CQ5T751 118 aa2.55□□□□□ -2
IFT43-212ENST00000556742 LCE1BQ5T7P3 118 aa2.55□□□□□ -2
IFT43-212ENST00000556742 LCE3DQ9BYE3 92 aa2.52□□□□□ -2.01
IFT43-212ENST00000556742 LUZP6Q538Z0 58 aa2.51□□□□□ -2.01
IFT43-212ENST00000556742 LCE3EQ5T5B0 92 aa2.38□□□□□ -2.03
IFT43-212ENST00000556742 NDUFAF8A1L188 74 aa2.26□□□□□ -2.05
IFT43-212ENST00000556742 KRTAP21-2Q3LI59 83 aa2.14□□□□□ -2.07
IFT43-212ENST00000556742 PHGR1C9JFL3 82 aa2.06□□□□□ -2.08
IFT43-212ENST00000556742 INE1O15225 51 aa1.82□□□□□ -2.12
IFT43-212ENST00000556742 MUC19Q7Z5P9 8384 aa1.81□□□□□ -2.12
IFT43-212ENST00000556742 PRM1P04553 51 aa1.81□□□□□ -2.12
IFT43-212ENST00000556742 KRTAP21-1Q3LI58 79 aa1.57□□□□□ -2.16
IFT43-212ENST00000556742 MUC16Q8WXI7 14507 aa1.24□□□□□ -2.21
Retrieved 77 of 20,778 RNA–protein pairs in 38.8 ms