RNA–Protein interactions for RNA: ENST00000556682.5

XRCC3-216, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 4

Gene XRCC3, Length 535 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-216ENST00000556682 MT1EP04732 61 aa4.01□□□□□ -1.77
XRCC3-216ENST00000556682 ATP5EP56381 51 aaPredicted RBP4□□□□□ -1.77
XRCC3-216ENST00000556682 KRTAP19-3Q7Z4W3 81 aa4□□□□□ -1.77
XRCC3-216ENST00000556682 PRR15LQ9BU68 103 aa4□□□□□ -1.77
XRCC3-216ENST00000556682 A8MU10 97 aa3.97□□□□□ -1.77
XRCC3-216ENST00000556682 CCDC179H3BU77 68 aa3.97□□□□□ -1.77
XRCC3-216ENST00000556682 KRTAP19-5Q3LI72 72 aa3.95□□□□□ -1.78
XRCC3-216ENST00000556682 TNP1P09430 55 aa3.93□□□□□ -1.78
XRCC3-216ENST00000556682 MT1GP13640 62 aa3.93□□□□□ -1.78
XRCC3-216ENST00000556682 PP632Q6XCG6 107 aa3.93□□□□□ -1.78
XRCC3-216ENST00000556682 LINC01558Q9Y6Z2 57 aa3.9□□□□□ -1.79
XRCC3-216ENST00000556682 C10orf95Q9H7T3 257 aa3.88□□□□□ -1.79
XRCC3-216ENST00000556682 TMEM258P61165 79 aa3.86□□□□□ -1.79
XRCC3-216ENST00000556682 UQCR11O14957 56 aa3.85□□□□□ -1.79
XRCC3-216ENST00000556682 LCE3AQ5TA76 89 aa3.85□□□□□ -1.79
XRCC3-216ENST00000556682 MT1LQ93083 61 aa3.83□□□□□ -1.8
XRCC3-216ENST00000556682 MT1MQ8N339 61 aa3.82□□□□□ -1.8
XRCC3-216ENST00000556682 DSTQ03001 7570 aaKnown RBP3.81□□□□□ -1.8
XRCC3-216ENST00000556682 K7ERS5 55 aa3.74□□□□□ -1.81
XRCC3-216ENST00000556682 MIR22HGQ0VDD5 57 aa3.74□□□□□ -1.81
XRCC3-216ENST00000556682 KRTAP12-3P60328 96 aa3.73□□□□□ -1.81
XRCC3-216ENST00000556682 V9GYY9 64 aa3.71□□□□□ -1.82
XRCC3-216ENST00000556682 MT3P25713 68 aa3.7□□□□□ -1.82
XRCC3-216ENST00000556682 KRTAP25-1Q3LHN0 102 aa3.7□□□□□ -1.82
XRCC3-216ENST00000556682 MT4P47944 62 aa3.69□□□□□ -1.82
XRCC3-216ENST00000556682 KRTAP4-3Q9BYR4 195 aa3.69□□□□□ -1.82
XRCC3-216ENST00000556682 PSPHP1O15172 72 aa3.64□□□□□ -1.83
XRCC3-216ENST00000556682 KRTAP5-4Q6L8H1 288 aa3.64□□□□□ -1.83
XRCC3-216ENST00000556682 Q1T7F1 81 aa3.63□□□□□ -1.83
XRCC3-216ENST00000556682 GPR98Q8WXG9 6306 aa3.6□□□□□ -1.83
XRCC3-216ENST00000556682 HMCN1Q96RW7 5635 aa3.58□□□□□ -1.84
XRCC3-216ENST00000556682 A6NED7 52 aa3.54□□□□□ -1.84
XRCC3-216ENST00000556682 CDC42SE1Q9NRR8 79 aa3.5□□□□□ -1.85
XRCC3-216ENST00000556682 KRTAP12-4P60329 112 aa3.48□□□□□ -1.85
XRCC3-216ENST00000556682 KRTAP5-5Q701N2 237 aaPredicted RBP3.48□□□□□ -1.85
XRCC3-216ENST00000556682 SPRR5A0A1B0GTR4 108 aa3.46□□□□□ -1.86
XRCC3-216ENST00000556682 KRTAP5-10Q6L8G5 202 aa3.46□□□□□ -1.86
XRCC3-216ENST00000556682 KRTAP20-2Q3LI61 65 aa3.45□□□□□ -1.86
XRCC3-216ENST00000556682 AHNAK2Q8IVF2 5795 aa3.44□□□□□ -1.86
XRCC3-216ENST00000556682 RPS28P62857 69 aaKnown RBP3.43□□□□□ -1.86
XRCC3-216ENST00000556682 LCE3CQ5T5A8 94 aa3.43□□□□□ -1.86
XRCC3-216ENST00000556682 ROMO1P60602 79 aa3.42□□□□□ -1.86
XRCC3-216ENST00000556682 PRAC1Q96KF2 57 aa3.42□□□□□ -1.86
XRCC3-216ENST00000556682 LCE1FQ5T754 118 aa3.4□□□□□ -1.87
XRCC3-216ENST00000556682 LCE1EQ5T753 118 aa3.39□□□□□ -1.87
XRCC3-216ENST00000556682 KRTAP5-11Q6L8G4 156 aa3.35□□□□□ -1.87
XRCC3-216ENST00000556682 KRTAP5-7Q6L8G8 165 aa3.34□□□□□ -1.87
XRCC3-216ENST00000556682 SYNE1Q8NF91 8797 aaKnown RBP3.31□□□□□ -1.88
XRCC3-216ENST00000556682 NDUFAF8A1L188 74 aa3.3□□□□□ -1.88
XRCC3-216ENST00000556682 MT1AP04731 61 aa3.27□□□□□ -1.89
XRCC3-216ENST00000556682 KRTAP6-1Q3LI64 71 aa3.23□□□□□ -1.89
XRCC3-216ENST00000556682 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.21□□□□□ -1.9
XRCC3-216ENST00000556682 KRTAP5-2Q701N4 177 aa3.18□□□□□ -1.9
XRCC3-216ENST00000556682 KRTAP9-6A8MVA2 160 aa3.17□□□□□ -1.9
XRCC3-216ENST00000556682 KRTAP6-2Q3LI66 62 aa3.1□□□□□ -1.91
XRCC3-216ENST00000556682 KRTAP5-8O75690 187 aa3.04□□□□□ -1.92
XRCC3-216ENST00000556682 BRK1Q8WUW1 75 aa3□□□□□ -1.93
XRCC3-216ENST00000556682 LCE3EQ5T5B0 92 aa2.88□□□□□ -1.95
XRCC3-216ENST00000556682 OBSCNQ5VST9 7968 aa2.87□□□□□ -1.95
XRCC3-216ENST00000556682 KRTAP5-1Q6L8H4 278 aa2.85□□□□□ -1.95
XRCC3-216ENST00000556682 PMAIP1Q13794 54 aa2.84□□□□□ -1.95
XRCC3-216ENST00000556682 MUC5BQ9HC84 5762 aaPredicted RBP2.83□□□□□ -1.96
XRCC3-216ENST00000556682 MUC5ACP98088 5654 aa2.82□□□□□ -1.96
XRCC3-216ENST00000556682 AHNAKQ09666 5890 aaKnown RBP2.81□□□□□ -1.96
XRCC3-216ENST00000556682 KRTAP4-4Q9BYR3 166 aa2.66□□□□□ -1.98
XRCC3-216ENST00000556682 LCE1BQ5T7P3 118 aa2.61□□□□□ -1.99
XRCC3-216ENST00000556682 PRO0628Q9UI54 55 aa2.57□□□□□ -2
XRCC3-216ENST00000556682 LCE1CQ5T751 118 aa2.56□□□□□ -2
XRCC3-216ENST00000556682 LCE3DQ9BYE3 92 aa2.49□□□□□ -2.01
XRCC3-216ENST00000556682 KTN1-AS1Q86SY8 53 aa2.47□□□□□ -2.01
XRCC3-216ENST00000556682 LUZP6Q538Z0 58 aa2.38□□□□□ -2.03
XRCC3-216ENST00000556682 KRTAP21-2Q3LI59 83 aa2.13□□□□□ -2.07
XRCC3-216ENST00000556682 PHGR1C9JFL3 82 aa2.03□□□□□ -2.08
XRCC3-216ENST00000556682 MUC19Q7Z5P9 8384 aa1.82□□□□□ -2.12
XRCC3-216ENST00000556682 PRM1P04553 51 aa1.73□□□□□ -2.13
XRCC3-216ENST00000556682 KRTAP21-1Q3LI58 79 aa1.56□□□□□ -2.16
XRCC3-216ENST00000556682 INE1O15225 51 aa1.46□□□□□ -2.18
XRCC3-216ENST00000556682 MUC16Q8WXI7 14507 aa1.27□□□□□ -2.21
Retrieved 78 of 20,778 RNA–protein pairs in 11.7 ms