RNA–Protein interactions for RNA: ENST00000556587.5

SRSF5-215, Transcript of serine and arginine rich splicing factor 5, humanhuman

TSL 1 (best)

Gene SRSF5, Length 1,863 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF5-215ENST00000556587 LCE3AQ5TA76 89 aa5.1□□□□□ -1.59
SRSF5-215ENST00000556587 KRTAP4-7Q9BYR0 210 aa5.1□□□□□ -1.59
SRSF5-215ENST00000556587 KRTAP9-9Q9BYP9 154 aa5.09□□□□□ -1.59
SRSF5-215ENST00000556587 KRTAP9-4Q9BYQ2 154 aa5.09□□□□□ -1.59
SRSF5-215ENST00000556587 MT1XP80297 61 aa5.09□□□□□ -1.6
SRSF5-215ENST00000556587 SPRR5A0A1B0GTR4 108 aa5.07□□□□□ -1.6
SRSF5-215ENST00000556587 KRTAP8-1Q8IUC2 63 aa5.07□□□□□ -1.6
SRSF5-215ENST00000556587 KRTAP10-12P60413 245 aa5.03□□□□□ -1.6
SRSF5-215ENST00000556587 KRTAP5-3Q6L8H2 238 aa4.98□□□□□ -1.61
SRSF5-215ENST00000556587 KRTAP12-3P60328 96 aa4.93□□□□□ -1.62
SRSF5-215ENST00000556587 KRTAP2-3P0C7H8 128 aa4.92□□□□□ -1.62
SRSF5-215ENST00000556587 KRTAP2-4Q9BYR9 128 aa4.92□□□□□ -1.62
SRSF5-215ENST00000556587 SPRR2FQ96RM1 72 aa4.9□□□□□ -1.63
SRSF5-215ENST00000556587 KRTAP4-12Q9BQ66 201 aa4.9□□□□□ -1.63
SRSF5-215ENST00000556587 KRTAP10-7P60409 375 aaPredicted RBP4.89□□□□□ -1.63
SRSF5-215ENST00000556587 KRTAP4-2Q9BYR5 136 aa4.88□□□□□ -1.63
SRSF5-215ENST00000556587 SPRR2EP22531 72 aa4.86□□□□□ -1.63
SRSF5-215ENST00000556587 SPRR2BP35325 72 aa4.86□□□□□ -1.63
SRSF5-215ENST00000556587 SPRR2AP35326 72 aa4.86□□□□□ -1.63
SRSF5-215ENST00000556587 LCE1DQ5T752 114 aa4.83□□□□□ -1.64
SRSF5-215ENST00000556587 LCE1AQ5T7P2 110 aa4.81□□□□□ -1.64
SRSF5-215ENST00000556587 KRTAP4-9Q9BYQ8 210 aa4.81□□□□□ -1.64
SRSF5-215ENST00000556587 KRTAP2-2Q9BYT5 123 aa4.75□□□□□ -1.65
SRSF5-215ENST00000556587 KRTAP2-1Q9BYU5 128 aa4.75□□□□□ -1.65
SRSF5-215ENST00000556587 KRTAP19-5Q3LI72 72 aa4.71□□□□□ -1.66
SRSF5-215ENST00000556587 KRTAP19-4Q3LI73 84 aa4.71□□□□□ -1.66
SRSF5-215ENST00000556587 SPRR2DP22532 72 aa4.69□□□□□ -1.66
SRSF5-215ENST00000556587 LCE3CQ5T5A8 94 aa4.64□□□□□ -1.67
SRSF5-215ENST00000556587 KRTAP19-7Q3SYF9 63 aa4.52□□□□□ -1.69
SRSF5-215ENST00000556587 DSTQ03001 7570 aaKnown RBP4.49□□□□□ -1.69
SRSF5-215ENST00000556587 KRTAP4-11Q9BYQ6 195 aa4.48□□□□□ -1.69
SRSF5-215ENST00000556587 INE1O15225 51 aa4.47□□□□□ -1.69
SRSF5-215ENST00000556587 MT1EP04732 61 aa4.44□□□□□ -1.7
SRSF5-215ENST00000556587 GPR98Q8WXG9 6306 aa4.43□□□□□ -1.7
SRSF5-215ENST00000556587 LCE5AQ5TCM9 118 aa4.42□□□□□ -1.7
SRSF5-215ENST00000556587 MT1LQ93083 61 aa4.42□□□□□ -1.7
SRSF5-215ENST00000556587 KRTAP19-3Q7Z4W3 81 aa4.32□□□□□ -1.72
SRSF5-215ENST00000556587 KRTAP9-6A8MVA2 160 aa4.3□□□□□ -1.72
SRSF5-215ENST00000556587 MT1GP13640 62 aa4.24□□□□□ -1.73
SRSF5-215ENST00000556587 HMCN1Q96RW7 5635 aa4.2□□□□□ -1.74
SRSF5-215ENST00000556587 MT1MQ8N339 61 aa4.15□□□□□ -1.74
SRSF5-215ENST00000556587 LCE4AQ5TA78 99 aa4.14□□□□□ -1.75
SRSF5-215ENST00000556587 MT4P47944 62 aa4.13□□□□□ -1.75
SRSF5-215ENST00000556587 KRTAP5-4Q6L8H1 288 aa4.08□□□□□ -1.76
SRSF5-215ENST00000556587 AHNAK2Q8IVF2 5795 aa4.07□□□□□ -1.76
SRSF5-215ENST00000556587 KRTAP5-10Q6L8G5 202 aa4.05□□□□□ -1.76
SRSF5-215ENST00000556587 KRTAP4-3Q9BYR4 195 aa4.05□□□□□ -1.76
SRSF5-215ENST00000556587 KRTAP5-7Q6L8G8 165 aa3.9□□□□□ -1.78
SRSF5-215ENST00000556587 LCE1FQ5T754 118 aa3.9□□□□□ -1.79
SRSF5-215ENST00000556587 KRTAP20-2Q3LI61 65 aa3.84□□□□□ -1.79
SRSF5-215ENST00000556587 KRTAP5-5Q701N2 237 aaPredicted RBP3.84□□□□□ -1.79
SRSF5-215ENST00000556587 MT3P25713 68 aa3.78□□□□□ -1.8
SRSF5-215ENST00000556587 MT1AP04731 61 aa3.77□□□□□ -1.81
SRSF5-215ENST00000556587 KRTAP12-4P60329 112 aa3.72□□□□□ -1.81
SRSF5-215ENST00000556587 SYNE1Q8NF91 8797 aaKnown RBP3.72□□□□□ -1.81
SRSF5-215ENST00000556587 KRTAP6-1Q3LI64 71 aa3.69□□□□□ -1.82
SRSF5-215ENST00000556587 LCE3DQ9BYE3 92 aa3.57□□□□□ -1.84
SRSF5-215ENST00000556587 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.56□□□□□ -1.84
SRSF5-215ENST00000556587 KRTAP5-2Q701N4 177 aa3.54□□□□□ -1.84
SRSF5-215ENST00000556587 LCE3EQ5T5B0 92 aa3.52□□□□□ -1.85
SRSF5-215ENST00000556587 KRTAP5-8O75690 187 aa3.46□□□□□ -1.86
SRSF5-215ENST00000556587 OBSCNQ5VST9 7968 aa3.43□□□□□ -1.86
SRSF5-215ENST00000556587 MUC5ACP98088 5654 aa3.41□□□□□ -1.86
SRSF5-215ENST00000556587 MUC5BQ9HC84 5762 aaPredicted RBP3.39□□□□□ -1.87
SRSF5-215ENST00000556587 LCE1EQ5T753 118 aa3.37□□□□□ -1.87
SRSF5-215ENST00000556587 AHNAKQ09666 5890 aaKnown RBP3.36□□□□□ -1.87
SRSF5-215ENST00000556587 KRTAP6-2Q3LI66 62 aa3.36□□□□□ -1.87
SRSF5-215ENST00000556587 PRM1P04553 51 aa3.22□□□□□ -1.89
SRSF5-215ENST00000556587 KRTAP5-1Q6L8H4 278 aa3.22□□□□□ -1.89
SRSF5-215ENST00000556587 KRTAP5-11Q6L8G4 156 aa2.98□□□□□ -1.93
SRSF5-215ENST00000556587 KRTAP4-4Q9BYR3 166 aa2.92□□□□□ -1.94
SRSF5-215ENST00000556587 LCE1BQ5T7P3 118 aa2.79□□□□□ -1.96
SRSF5-215ENST00000556587 LCE1CQ5T751 118 aa2.77□□□□□ -1.97
SRSF5-215ENST00000556587 KRTAP21-2Q3LI59 83 aa2.41□□□□□ -2.02
SRSF5-215ENST00000556587 PHGR1C9JFL3 82 aa2.34□□□□□ -2.03
SRSF5-215ENST00000556587 MUC19Q7Z5P9 8384 aa2.12□□□□□ -2.07
SRSF5-215ENST00000556587 KRTAP21-1Q3LI58 79 aa2.05□□□□□ -2.08
SRSF5-215ENST00000556587 MUC16Q8WXI7 14507 aa1.46□□□□□ -2.18
Retrieved 78 of 20,778 RNA–protein pairs in 12.5 ms