RNA–Protein interactions for RNA: ENST00000556074.5

NEMF-209, Transcript of nuclear export mediator factor, humanhuman

TSL 1 (best)

Gene NEMF, Length 3,047 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEMF-209ENST00000556074 KRTAP12-3P60328 96 aa2.47□□□□□ -2.01
NEMF-209ENST00000556074 USH2AO75445 5202 aa2.47□□□□□ -2.01
NEMF-209ENST00000556074 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.45□□□□□ -2.02
NEMF-209ENST00000556074 M0R2T5 61 aa2.38□□□□□ -2.03
NEMF-209ENST00000556074 KRTAP19-2Q3LHN2 52 aa2.36□□□□□ -2.03
NEMF-209ENST00000556074 MT1HP80294 61 aa2.35□□□□□ -2.03
NEMF-209ENST00000556074 FLGP20930 4061 aaPredicted RBP2.32□□□□□ -2.04
NEMF-209ENST00000556074 SSPOA2VEC9 5147 aa2.32□□□□□ -2.04
NEMF-209ENST00000556074 RPS29P62273 56 aaKnown RBP2.31□□□□□ -2.04
NEMF-209ENST00000556074 SYNE2Q8WXH0 6885 aaKnown RBP2.28□□□□□ -2.04
NEMF-209ENST00000556074 CRCT1Q9UGL9 99 aa2.27□□□□□ -2.05
NEMF-209ENST00000556074 FCGBPQ9Y6R7 5405 aaPredicted RBP2.24□□□□□ -2.05
NEMF-209ENST00000556074 MACF1Q9UPN3 7388 aaKnown RBP2.24□□□□□ -2.05
NEMF-209ENST00000556074 KRTAP5-11Q6L8G4 156 aa2.23□□□□□ -2.05
NEMF-209ENST00000556074 MT1FP04733 61 aa2.2□□□□□ -2.06
NEMF-209ENST00000556074 MT2AP02795 61 aa2.2□□□□□ -2.06
NEMF-209ENST00000556074 M0QZ58 72 aa2.17□□□□□ -2.06
NEMF-209ENST00000556074 KMT2DO14686 5537 aa2.14□□□□□ -2.07
NEMF-209ENST00000556074 KRTAP5-9P26371 169 aa2.14□□□□□ -2.07
NEMF-209ENST00000556074 KRTAP9-6A8MVA2 160 aa2.13□□□□□ -2.07
NEMF-209ENST00000556074 MUC12Q9UKN1 5478 aa2.12□□□□□ -2.07
NEMF-209ENST00000556074 HMCN1Q96RW7 5635 aa2.12□□□□□ -2.07
NEMF-209ENST00000556074 MDN1Q9NU22 5596 aa2.06□□□□□ -2.08
NEMF-209ENST00000556074 KRTAP2-3P0C7H8 128 aa2.05□□□□□ -2.08
NEMF-209ENST00000556074 KRTAP2-4Q9BYR9 128 aa2.05□□□□□ -2.08
NEMF-209ENST00000556074 KRTAP2-1Q9BYU5 128 aa2.05□□□□□ -2.08
NEMF-209ENST00000556074 KRTAP5-4Q6L8H1 288 aa2.05□□□□□ -2.08
NEMF-209ENST00000556074 MT1BP07438 61 aa1.99□□□□□ -2.09
NEMF-209ENST00000556074 LCE1CQ5T751 118 aa1.99□□□□□ -2.09
NEMF-209ENST00000556074 LCE1BQ5T7P3 118 aa1.99□□□□□ -2.09
NEMF-209ENST00000556074 KRTAP19-6Q3LI70 58 aa1.99□□□□□ -2.09
NEMF-209ENST00000556074 TNP1P09430 55 aa1.96□□□□□ -2.1
NEMF-209ENST00000556074 DSTQ03001 7570 aaKnown RBP1.96□□□□□ -2.1
NEMF-209ENST00000556074 NEBP20929 6669 aa1.96□□□□□ -2.1
NEMF-209ENST00000556074 KRTAP5-1Q6L8H4 278 aa1.94□□□□□ -2.1
NEMF-209ENST00000556074 SPRR2GQ9BYE4 73 aa1.92□□□□□ -2.1
NEMF-209ENST00000556074 PRM1P04553 51 aa1.92□□□□□ -2.1
NEMF-209ENST00000556074 KRTAP4-4Q9BYR3 166 aa1.92□□□□□ -2.1
NEMF-209ENST00000556074 KRTAP19-8Q3LI54 63 aa1.9□□□□□ -2.11
NEMF-209ENST00000556074 GPR98Q8WXG9 6306 aa1.9□□□□□ -2.11
NEMF-209ENST00000556074 SPRR2FQ96RM1 72 aa1.88□□□□□ -2.11
NEMF-209ENST00000556074 MT1XP80297 61 aa1.87□□□□□ -2.11
NEMF-209ENST00000556074 LCE3AQ5TA76 89 aa1.83□□□□□ -2.12
NEMF-209ENST00000556074 SPRR2EP22531 72 aa1.82□□□□□ -2.12
NEMF-209ENST00000556074 SPRR2BP35325 72 aa1.82□□□□□ -2.12
NEMF-209ENST00000556074 SPRR2AP35326 72 aa1.82□□□□□ -2.12
NEMF-209ENST00000556074 KRTAP19-3Q7Z4W3 81 aa1.82□□□□□ -2.12
NEMF-209ENST00000556074 KRTAP8-1Q8IUC2 63 aa1.82□□□□□ -2.12
NEMF-209ENST00000556074 KRTAP20-1Q3LI63 56 aa1.8□□□□□ -2.12
NEMF-209ENST00000556074 KRTAP5-2Q701N4 177 aa1.78□□□□□ -2.12
NEMF-209ENST00000556074 OBSCNQ5VST9 7968 aa1.75□□□□□ -2.13
NEMF-209ENST00000556074 SPRR2DP22532 72 aa1.74□□□□□ -2.13
NEMF-209ENST00000556074 KRTAP5-5Q701N2 237 aaPredicted RBP1.72□□□□□ -2.13
NEMF-209ENST00000556074 SYNE1Q8NF91 8797 aaKnown RBP1.72□□□□□ -2.13
NEMF-209ENST00000556074 MUC5BQ9HC84 5762 aaPredicted RBP1.71□□□□□ -2.14
NEMF-209ENST00000556074 KRTAP5-7Q6L8G8 165 aa1.71□□□□□ -2.14
NEMF-209ENST00000556074 KRTAP4-3Q9BYR4 195 aa1.69□□□□□ -2.14
NEMF-209ENST00000556074 KRTAP19-7Q3SYF9 63 aa1.67□□□□□ -2.14
NEMF-209ENST00000556074 KRTAP19-5Q3LI72 72 aa1.66□□□□□ -2.14
NEMF-209ENST00000556074 MUC19Q7Z5P9 8384 aa1.64□□□□□ -2.15
NEMF-209ENST00000556074 MT1EP04732 61 aa1.64□□□□□ -2.15
NEMF-209ENST00000556074 MT4P47944 62 aa1.62□□□□□ -2.15
NEMF-209ENST00000556074 KRTAP5-8O75690 187 aa1.58□□□□□ -2.16
NEMF-209ENST00000556074 AHNAKQ09666 5890 aaKnown RBP1.58□□□□□ -2.16
NEMF-209ENST00000556074 MT1LQ93083 61 aa1.57□□□□□ -2.16
NEMF-209ENST00000556074 MT1MQ8N339 61 aa1.56□□□□□ -2.16
NEMF-209ENST00000556074 MT1GP13640 62 aa1.53□□□□□ -2.16
NEMF-209ENST00000556074 KRTAP5-10Q6L8G5 202 aa1.53□□□□□ -2.16
NEMF-209ENST00000556074 AHNAK2Q8IVF2 5795 aa1.52□□□□□ -2.17
NEMF-209ENST00000556074 KRTAP21-1Q3LI58 79 aa1.46□□□□□ -2.18
NEMF-209ENST00000556074 KRTAP6-2Q3LI66 62 aa1.44□□□□□ -2.18
NEMF-209ENST00000556074 MT1AP04731 61 aa1.4□□□□□ -2.18
NEMF-209ENST00000556074 KRTAP20-2Q3LI61 65 aa1.4□□□□□ -2.18
NEMF-209ENST00000556074 KRTAP6-1Q3LI64 71 aa1.37□□□□□ -2.19
NEMF-209ENST00000556074 MUC5ACP98088 5654 aa1.32□□□□□ -2.2
NEMF-209ENST00000556074 KRTAP21-2Q3LI59 83 aa1.02□□□□□ -2.25
NEMF-209ENST00000556074 PHGR1C9JFL3 82 aa0.86□□□□□ -2.27
NEMF-209ENST00000556074 MUC16Q8WXI7 14507 aa0.7□□□□□ -2.3
Retrieved 78 of 20,778 RNA–protein pairs in 1098 ms