RNA–Protein interactions for RNA: ENST00000555962.5

CHD8-210, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 5

Gene CHD8, Length 1,232 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-210ENST00000555962 KRTAP5-9P26371 169 aa3.56□□□□□ -1.84
CHD8-210ENST00000555962 GPR98Q8WXG9 6306 aa3.55□□□□□ -1.84
CHD8-210ENST00000555962 Q1T7F1 81 aa3.54□□□□□ -1.84
CHD8-210ENST00000555962 UQCR11O14957 56 aa3.53□□□□□ -1.84
CHD8-210ENST00000555962 KRTAP8-1Q8IUC2 63 aa3.53□□□□□ -1.84
CHD8-210ENST00000555962 MUC12Q9UKN1 5478 aa3.51□□□□□ -1.85
CHD8-210ENST00000555962 KRTAP20-1Q3LI63 56 aa3.5□□□□□ -1.85
CHD8-210ENST00000555962 RPS28P62857 69 aaKnown RBP3.49□□□□□ -1.85
CHD8-210ENST00000555962 LUZP6Q538Z0 58 aa3.49□□□□□ -1.85
CHD8-210ENST00000555962 SPRR2FQ96RM1 72 aa3.49□□□□□ -1.85
CHD8-210ENST00000555962 MIR22HGQ0VDD5 57 aa3.47□□□□□ -1.85
CHD8-210ENST00000555962 C10orf95Q9H7T3 257 aa3.45□□□□□ -1.86
CHD8-210ENST00000555962 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.41□□□□□ -1.86
CHD8-210ENST00000555962 MDN1Q9NU22 5596 aa3.4□□□□□ -1.86
CHD8-210ENST00000555962 SPRR2EP22531 72 aa3.4□□□□□ -1.87
CHD8-210ENST00000555962 SPRR2BP35325 72 aa3.4□□□□□ -1.87
CHD8-210ENST00000555962 SPRR2AP35326 72 aa3.4□□□□□ -1.87
CHD8-210ENST00000555962 A6NED7 52 aa3.39□□□□□ -1.87
CHD8-210ENST00000555962 KRTAP5-11Q6L8G4 156 aa3.39□□□□□ -1.87
CHD8-210ENST00000555962 LCE1EQ5T753 118 aa3.38□□□□□ -1.87
CHD8-210ENST00000555962 TNP1P09430 55 aa3.37□□□□□ -1.87
CHD8-210ENST00000555962 KRTAP19-7Q3SYF9 63 aa3.37□□□□□ -1.87
CHD8-210ENST00000555962 LCE3EQ5T5B0 92 aa3.35□□□□□ -1.87
CHD8-210ENST00000555962 K7ERS5 55 aa3.34□□□□□ -1.87
CHD8-210ENST00000555962 LCE3AQ5TA76 89 aa3.33□□□□□ -1.88
CHD8-210ENST00000555962 MT1EP04732 61 aa3.32□□□□□ -1.88
CHD8-210ENST00000555962 KRTAP19-5Q3LI72 72 aa3.32□□□□□ -1.88
CHD8-210ENST00000555962 SPRR2DP22532 72 aa3.28□□□□□ -1.88
CHD8-210ENST00000555962 CDC42SE1Q9NRR8 79 aa3.28□□□□□ -1.88
CHD8-210ENST00000555962 KRTAP2-3P0C7H8 128 aa3.26□□□□□ -1.89
CHD8-210ENST00000555962 KRTAP25-1Q3LHN0 102 aa3.26□□□□□ -1.89
CHD8-210ENST00000555962 KRTAP2-4Q9BYR9 128 aa3.26□□□□□ -1.89
CHD8-210ENST00000555962 KRTAP19-3Q7Z4W3 81 aa3.25□□□□□ -1.89
CHD8-210ENST00000555962 MT1LQ93083 61 aa3.21□□□□□ -1.9
CHD8-210ENST00000555962 MT1GP13640 62 aa3.19□□□□□ -1.9
CHD8-210ENST00000555962 KRTAP12-3P60328 96 aa3.19□□□□□ -1.9
CHD8-210ENST00000555962 ROMO1P60602 79 aa3.18□□□□□ -1.9
CHD8-210ENST00000555962 MT1MQ8N339 61 aa3.16□□□□□ -1.9
CHD8-210ENST00000555962 KRTAP2-1Q9BYU5 128 aa3.16□□□□□ -1.9
CHD8-210ENST00000555962 KRTAP9-6A8MVA2 160 aa3.14□□□□□ -1.91
CHD8-210ENST00000555962 PP632Q6XCG6 107 aa3.13□□□□□ -1.91
CHD8-210ENST00000555962 BRK1Q8WUW1 75 aa3.1□□□□□ -1.91
CHD8-210ENST00000555962 KRTAP4-3Q9BYR4 195 aa3.1□□□□□ -1.91
CHD8-210ENST00000555962 DSTQ03001 7570 aaKnown RBP3.07□□□□□ -1.92
CHD8-210ENST00000555962 SPRR5A0A1B0GTR4 108 aa3.06□□□□□ -1.92
CHD8-210ENST00000555962 AHNAK2Q8IVF2 5795 aa3□□□□□ -1.93
CHD8-210ENST00000555962 KRTAP5-1Q6L8H4 278 aa2.96□□□□□ -1.94
CHD8-210ENST00000555962 PMAIP1Q13794 54 aa2.91□□□□□ -1.94
CHD8-210ENST00000555962 KRTAP5-4Q6L8H1 288 aa2.91□□□□□ -1.94
CHD8-210ENST00000555962 LCE3DQ9BYE3 92 aa2.89□□□□□ -1.95
CHD8-210ENST00000555962 KRTAP5-5Q701N2 237 aaPredicted RBP2.88□□□□□ -1.95
CHD8-210ENST00000555962 MT4P47944 62 aa2.87□□□□□ -1.95
CHD8-210ENST00000555962 KRTAP4-4Q9BYR3 166 aa2.84□□□□□ -1.95
CHD8-210ENST00000555962 HMCN1Q96RW7 5635 aa2.83□□□□□ -1.96
CHD8-210ENST00000555962 KRTAP5-7Q6L8G8 165 aa2.77□□□□□ -1.97
CHD8-210ENST00000555962 KRTAP5-10Q6L8G5 202 aa2.75□□□□□ -1.97
CHD8-210ENST00000555962 AHNAKQ09666 5890 aaKnown RBP2.75□□□□□ -1.97
CHD8-210ENST00000555962 SYNE1Q8NF91 8797 aaKnown RBP2.74□□□□□ -1.97
CHD8-210ENST00000555962 KRTAP20-2Q3LI61 65 aa2.73□□□□□ -1.97
CHD8-210ENST00000555962 MT1AP04731 61 aa2.72□□□□□ -1.97
CHD8-210ENST00000555962 KRTAP12-4P60329 112 aa2.72□□□□□ -1.97
CHD8-210ENST00000555962 KRTAP6-1Q3LI64 71 aa2.71□□□□□ -1.98
CHD8-210ENST00000555962 KTN1-AS1Q86SY8 53 aa2.68□□□□□ -1.98
CHD8-210ENST00000555962 MUC5BQ9HC84 5762 aaPredicted RBP2.6□□□□□ -1.99
CHD8-210ENST00000555962 KRTAP5-2Q701N4 177 aa2.59□□□□□ -1.99
CHD8-210ENST00000555962 OBSCNQ5VST9 7968 aa2.58□□□□□ -2
CHD8-210ENST00000555962 KRTAP6-2Q3LI66 62 aa2.55□□□□□ -2
CHD8-210ENST00000555962 MUC5ACP98088 5654 aa2.46□□□□□ -2.01
CHD8-210ENST00000555962 KRTAP5-8O75690 187 aa2.37□□□□□ -2.03
CHD8-210ENST00000555962 LCE1CQ5T751 118 aa2.29□□□□□ -2.04
CHD8-210ENST00000555962 LCE1BQ5T7P3 118 aa2.29□□□□□ -2.04
CHD8-210ENST00000555962 INE1O15225 51 aa2.02□□□□□ -2.09
CHD8-210ENST00000555962 MUC19Q7Z5P9 8384 aa1.8□□□□□ -2.12
CHD8-210ENST00000555962 KRTAP21-2Q3LI59 83 aa1.79□□□□□ -2.12
CHD8-210ENST00000555962 PHGR1C9JFL3 82 aa1.67□□□□□ -2.14
CHD8-210ENST00000555962 PRM1P04553 51 aa1.65□□□□□ -2.15
CHD8-210ENST00000555962 KRTAP21-1Q3LI58 79 aa1.26□□□□□ -2.21
CHD8-210ENST00000555962 MUC16Q8WXI7 14507 aa1.01□□□□□ -2.25
Retrieved 78 of 20,778 RNA–protein pairs in 12.1 ms