RNA–Protein interactions for RNA: ENST00000555837.5

CDKN3-208, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

TSL 2

Gene CDKN3, Length 689 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-208ENST00000555837 LCE5AQ5TCM9 118 aa8.36□□□□□ -1.07
CDKN3-208ENST00000555837 LCE3AQ5TA76 89 aa8.35□□□□□ -1.07
CDKN3-208ENST00000555837 KRTAP25-1Q3LHN0 102 aa8.33□□□□□ -1.08
CDKN3-208ENST00000555837 PP632Q6XCG6 107 aa8.33□□□□□ -1.08
CDKN3-208ENST00000555837 MT1GP13640 62 aa8.29□□□□□ -1.08
CDKN3-208ENST00000555837 MT1LQ93083 61 aa8.14□□□□□ -1.11
CDKN3-208ENST00000555837 KRTAP12-3P60328 96 aa8.12□□□□□ -1.11
CDKN3-208ENST00000555837 CDC42SE1Q9NRR8 79 aa8.12□□□□□ -1.11
CDKN3-208ENST00000555837 KRTAP23-1A1A580 65 aa8.08□□□□□ -1.12
CDKN3-208ENST00000555837 MT1MQ8N339 61 aa8.04□□□□□ -1.12
CDKN3-208ENST00000555837 DSTQ03001 7570 aaKnown RBP8□□□□□ -1.13
CDKN3-208ENST00000555837 ROMO1P60602 79 aa7.95□□□□□ -1.14
CDKN3-208ENST00000555837 KRTAP19-4Q3LI73 84 aa7.93□□□□□ -1.14
CDKN3-208ENST00000555837 H3BS24 57 aa7.76□□□□□ -1.17
CDKN3-208ENST00000555837 LCE4AQ5TA78 99 aa7.73□□□□□ -1.17
CDKN3-208ENST00000555837 KRTAP15-1Q3LI76 137 aa7.7□□□□□ -1.18
CDKN3-208ENST00000555837 KRTAP4-3Q9BYR4 195 aa7.7□□□□□ -1.18
CDKN3-208ENST00000555837 KRTAP4-7Q9BYR0 210 aa7.62□□□□□ -1.19
CDKN3-208ENST00000555837 KRTAP4-9Q9BYQ8 210 aa7.61□□□□□ -1.19
CDKN3-208ENST00000555837 LCE1DQ5T752 114 aa7.52□□□□□ -1.21
CDKN3-208ENST00000555837 KRTAP5-4Q6L8H1 288 aa7.52□□□□□ -1.21
CDKN3-208ENST00000555837 LCE3CQ5T5A8 94 aa7.5□□□□□ -1.21
CDKN3-208ENST00000555837 MT4P47944 62 aa7.48□□□□□ -1.21
CDKN3-208ENST00000555837 BRK1Q8WUW1 75 aa7.47□□□□□ -1.21
CDKN3-208ENST00000555837 KRTAP5-5Q701N2 237 aaPredicted RBP7.32□□□□□ -1.24
CDKN3-208ENST00000555837 HMCN1Q96RW7 5635 aa7.31□□□□□ -1.24
CDKN3-208ENST00000555837 KRTAP12-4P60329 112 aa7.26□□□□□ -1.25
CDKN3-208ENST00000555837 KRTAP4-6Q9BYQ5 205 aa7.24□□□□□ -1.25
CDKN3-208ENST00000555837 LOC100996750A0A140TA64 210 aa7.22□□□□□ -1.25
CDKN3-208ENST00000555837 SPRR5A0A1B0GTR4 108 aa7.18□□□□□ -1.26
CDKN3-208ENST00000555837 SVIPQ8NHG7 77 aa7.14□□□□□ -1.27
CDKN3-208ENST00000555837 GPR98Q8WXG9 6306 aa7.11□□□□□ -1.27
CDKN3-208ENST00000555837 PMAIP1Q13794 54 aa7.09□□□□□ -1.27
CDKN3-208ENST00000555837 KRTAP20-2Q3LI61 65 aa7.08□□□□□ -1.28
CDKN3-208ENST00000555837 MT1AP04731 61 aa6.97□□□□□ -1.29
CDKN3-208ENST00000555837 AHNAK2Q8IVF2 5795 aa6.92□□□□□ -1.3
CDKN3-208ENST00000555837 SYNE1Q8NF91 8797 aaKnown RBP6.91□□□□□ -1.3
CDKN3-208ENST00000555837 KRTAP9-6A8MVA2 160 aa6.88□□□□□ -1.31
CDKN3-208ENST00000555837 KRTAP5-10Q6L8G5 202 aa6.84□□□□□ -1.31
CDKN3-208ENST00000555837 KRTAP6-1Q3LI64 71 aa6.83□□□□□ -1.32
CDKN3-208ENST00000555837 KRTAP5-3Q6L8H2 238 aa6.83□□□□□ -1.32
CDKN3-208ENST00000555837 PRO0628Q9UI54 55 aa6.76□□□□□ -1.33
CDKN3-208ENST00000555837 KRTAP9-4Q9BYQ2 154 aa6.72□□□□□ -1.33
CDKN3-208ENST00000555837 KRTAP5-2Q701N4 177 aa6.63□□□□□ -1.35
CDKN3-208ENST00000555837 KRTAP5-7Q6L8G8 165 aa6.6□□□□□ -1.35
CDKN3-208ENST00000555837 PRAC1Q96KF2 57 aa6.57□□□□□ -1.36
CDKN3-208ENST00000555837 KRTAP6-2Q3LI66 62 aa6.51□□□□□ -1.37
CDKN3-208ENST00000555837 MT3P25713 68 aa6.44□□□□□ -1.38
CDKN3-208ENST00000555837 KRTAP4-11Q9BYQ6 195 aa6.43□□□□□ -1.38
CDKN3-208ENST00000555837 KTN1-AS1Q86SY8 53 aa6.41□□□□□ -1.38
CDKN3-208ENST00000555837 KRTAP5-8O75690 187 aa6.15□□□□□ -1.42
CDKN3-208ENST00000555837 OBSCNQ5VST9 7968 aa6.06□□□□□ -1.44
CDKN3-208ENST00000555837 KRTAP4-12Q9BQ66 201 aa5.96□□□□□ -1.46
CDKN3-208ENST00000555837 A0A0A0MQY5 61 aa5.94□□□□□ -1.46
CDKN3-208ENST00000555837 KRTAP9-9Q9BYP9 154 aa5.92□□□□□ -1.46
CDKN3-208ENST00000555837 KRTAP5-1Q6L8H4 278 aa5.87□□□□□ -1.47
CDKN3-208ENST00000555837 LCE1EQ5T753 118 aa5.86□□□□□ -1.47
CDKN3-208ENST00000555837 LUZP6Q538Z0 58 aa5.84□□□□□ -1.47
CDKN3-208ENST00000555837 MUC5ACP98088 5654 aa5.66□□□□□ -1.5
CDKN3-208ENST00000555837 MUC5BQ9HC84 5762 aaPredicted RBP5.65□□□□□ -1.51
CDKN3-208ENST00000555837 AHNAKQ09666 5890 aaKnown RBP5.63□□□□□ -1.51
CDKN3-208ENST00000555837 LCE3DQ9BYE3 92 aa5.5□□□□□ -1.53
CDKN3-208ENST00000555837 LCE1CQ5T751 118 aa5.41□□□□□ -1.54
CDKN3-208ENST00000555837 LCE1BQ5T7P3 118 aa5.41□□□□□ -1.54
CDKN3-208ENST00000555837 KRTAP4-2Q9BYR5 136 aa5.36□□□□□ -1.55
CDKN3-208ENST00000555837 LCE3EQ5T5B0 92 aa5.23□□□□□ -1.57
CDKN3-208ENST00000555837 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.94□□□□□ -1.62
CDKN3-208ENST00000555837 KRTAP5-11Q6L8G4 156 aa4.86□□□□□ -1.63
CDKN3-208ENST00000555837 LCE1FQ5T754 118 aa4.75□□□□□ -1.65
CDKN3-208ENST00000555837 NDUFAF8A1L188 74 aa4.72□□□□□ -1.65
CDKN3-208ENST00000555837 KRTAP21-2Q3LI59 83 aa4.5□□□□□ -1.69
CDKN3-208ENST00000555837 PHGR1C9JFL3 82 aa4.17□□□□□ -1.74
CDKN3-208ENST00000555837 KRTAP4-4Q9BYR3 166 aa4.01□□□□□ -1.77
CDKN3-208ENST00000555837 PRM1P04553 51 aa4□□□□□ -1.77
CDKN3-208ENST00000555837 INE1O15225 51 aa3.99□□□□□ -1.77
CDKN3-208ENST00000555837 MUC19Q7Z5P9 8384 aa3.73□□□□□ -1.81
CDKN3-208ENST00000555837 KRTAP21-1Q3LI58 79 aa3.12□□□□□ -1.91
CDKN3-208ENST00000555837 MUC16Q8WXI7 14507 aa2.67□□□□□ -1.98
Retrieved 78 of 20,778 RNA–protein pairs in 95.4 ms