RNA–Protein interactions for RNA: ENST00000555616.5

ACTN1-215, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 919 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-215ENST00000555616 KRTAP4-8Q9BYQ9 185 aa3.83□□□□□ -1.8
ACTN1-215ENST00000555616 TNP1P09430 55 aa3.81□□□□□ -1.8
ACTN1-215ENST00000555616 LCE1AQ5T7P2 110 aa3.81□□□□□ -1.8
ACTN1-215ENST00000555616 KRTAP25-1Q3LHN0 102 aa3.8□□□□□ -1.8
ACTN1-215ENST00000555616 KRTAP2-2Q9BYT5 123 aa3.8□□□□□ -1.8
ACTN1-215ENST00000555616 KRTAP2-1Q9BYU5 128 aa3.8□□□□□ -1.8
ACTN1-215ENST00000555616 KRTAP19-4Q3LI73 84 aa3.76□□□□□ -1.81
ACTN1-215ENST00000555616 LUZP6Q538Z0 58 aa3.76□□□□□ -1.81
ACTN1-215ENST00000555616 SPRR2DP22532 72 aa3.71□□□□□ -1.82
ACTN1-215ENST00000555616 PP632Q6XCG6 107 aa3.69□□□□□ -1.82
ACTN1-215ENST00000555616 LCE3AQ5TA76 89 aa3.63□□□□□ -1.83
ACTN1-215ENST00000555616 LCE3BQ5TA77 95 aa3.63□□□□□ -1.83
ACTN1-215ENST00000555616 KRTAP19-7Q3SYF9 63 aa3.62□□□□□ -1.83
ACTN1-215ENST00000555616 MT1EP04732 61 aa3.58□□□□□ -1.84
ACTN1-215ENST00000555616 LCE5AQ5TCM9 118 aa3.56□□□□□ -1.84
ACTN1-215ENST00000555616 GPR98Q8WXG9 6306 aa3.56□□□□□ -1.84
ACTN1-215ENST00000555616 KRTAP19-3Q7Z4W3 81 aa3.54□□□□□ -1.84
ACTN1-215ENST00000555616 KRTAP19-5Q3LI72 72 aa3.53□□□□□ -1.84
ACTN1-215ENST00000555616 KRTAP12-3P60328 96 aa3.51□□□□□ -1.85
ACTN1-215ENST00000555616 MT1GP13640 62 aa3.45□□□□□ -1.86
ACTN1-215ENST00000555616 KRTAP15-1Q3LI76 137 aa3.44□□□□□ -1.86
ACTN1-215ENST00000555616 NDUFAF8A1L188 74 aa3.43□□□□□ -1.86
ACTN1-215ENST00000555616 MT1LQ93083 61 aa3.43□□□□□ -1.86
ACTN1-215ENST00000555616 DSTQ03001 7570 aaKnown RBP3.43□□□□□ -1.86
ACTN1-215ENST00000555616 MT1MQ8N339 61 aa3.4□□□□□ -1.87
ACTN1-215ENST00000555616 KRTAP4-9Q9BYQ8 210 aa3.37□□□□□ -1.87
ACTN1-215ENST00000555616 LCE1DQ5T752 114 aa3.33□□□□□ -1.88
ACTN1-215ENST00000555616 LCE4AQ5TA78 99 aa3.32□□□□□ -1.88
ACTN1-215ENST00000555616 KRTAP4-3Q9BYR4 195 aa3.3□□□□□ -1.88
ACTN1-215ENST00000555616 HMCN1Q96RW7 5635 aa3.29□□□□□ -1.88
ACTN1-215ENST00000555616 LCE3CQ5T5A8 94 aa3.26□□□□□ -1.89
ACTN1-215ENST00000555616 KRTAP5-4Q6L8H1 288 aa3.26□□□□□ -1.89
ACTN1-215ENST00000555616 SPRR5A0A1B0GTR4 108 aa3.25□□□□□ -1.89
ACTN1-215ENST00000555616 KRTAP5-10Q6L8G5 202 aa3.25□□□□□ -1.89
ACTN1-215ENST00000555616 KRTAP4-7Q9BYR0 210 aa3.23□□□□□ -1.89
ACTN1-215ENST00000555616 MT4P47944 62 aa3.22□□□□□ -1.89
ACTN1-215ENST00000555616 KRTAP5-7Q6L8G8 165 aa3.17□□□□□ -1.9
ACTN1-215ENST00000555616 AHNAK2Q8IVF2 5795 aa3.15□□□□□ -1.91
ACTN1-215ENST00000555616 KRTAP5-5Q701N2 237 aaPredicted RBP3.15□□□□□ -1.91
ACTN1-215ENST00000555616 KRTAP4-6Q9BYQ5 205 aa3.15□□□□□ -1.91
ACTN1-215ENST00000555616 KRTAP9-4Q9BYQ2 154 aa3.14□□□□□ -1.91
ACTN1-215ENST00000555616 KRTAP5-3Q6L8H2 238 aa3.1□□□□□ -1.91
ACTN1-215ENST00000555616 KRTAP20-2Q3LI61 65 aa3.06□□□□□ -1.92
ACTN1-215ENST00000555616 LOC100996750A0A140TA64 210 aa3.05□□□□□ -1.92
ACTN1-215ENST00000555616 KRTAP9-6A8MVA2 160 aa3.03□□□□□ -1.92
ACTN1-215ENST00000555616 KRTAP12-4P60329 112 aa3.02□□□□□ -1.93
ACTN1-215ENST00000555616 KRTAP9-9Q9BYP9 154 aa3.02□□□□□ -1.93
ACTN1-215ENST00000555616 KRTAP4-12Q9BQ66 201 aa2.99□□□□□ -1.93
ACTN1-215ENST00000555616 SYNE1Q8NF91 8797 aaKnown RBP2.98□□□□□ -1.93
ACTN1-215ENST00000555616 INE1O15225 51 aa2.97□□□□□ -1.93
ACTN1-215ENST00000555616 MT1AP04731 61 aa2.91□□□□□ -1.94
ACTN1-215ENST00000555616 MT3P25713 68 aa2.9□□□□□ -1.95
ACTN1-215ENST00000555616 KRTAP6-1Q3LI64 71 aa2.88□□□□□ -1.95
ACTN1-215ENST00000555616 KRTAP5-2Q701N4 177 aa2.86□□□□□ -1.95
ACTN1-215ENST00000555616 KRTAP4-11Q9BYQ6 195 aa2.82□□□□□ -1.96
ACTN1-215ENST00000555616 KRTAP6-2Q3LI66 62 aa2.75□□□□□ -1.97
ACTN1-215ENST00000555616 KRTAP5-8O75690 187 aa2.74□□□□□ -1.97
ACTN1-215ENST00000555616 AHNAKQ09666 5890 aaKnown RBP2.73□□□□□ -1.97
ACTN1-215ENST00000555616 MUC5ACP98088 5654 aa2.69□□□□□ -1.98
ACTN1-215ENST00000555616 MUC5BQ9HC84 5762 aaPredicted RBP2.63□□□□□ -1.99
ACTN1-215ENST00000555616 OBSCNQ5VST9 7968 aa2.59□□□□□ -1.99
ACTN1-215ENST00000555616 KRTAP5-1Q6L8H4 278 aa2.55□□□□□ -2
ACTN1-215ENST00000555616 LCE1FQ5T754 118 aa2.51□□□□□ -2.01
ACTN1-215ENST00000555616 LCE1EQ5T753 118 aa2.46□□□□□ -2.02
ACTN1-215ENST00000555616 LCE3DQ9BYE3 92 aa2.44□□□□□ -2.02
ACTN1-215ENST00000555616 LCE3EQ5T5B0 92 aa2.36□□□□□ -2.03
ACTN1-215ENST00000555616 KRTAP4-2Q9BYR5 136 aa2.32□□□□□ -2.04
ACTN1-215ENST00000555616 LCE1CQ5T751 118 aa2.28□□□□□ -2.04
ACTN1-215ENST00000555616 LCE1BQ5T7P3 118 aa2.28□□□□□ -2.04
ACTN1-215ENST00000555616 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.09□□□□□ -2.07
ACTN1-215ENST00000555616 KRTAP5-11Q6L8G4 156 aa2.07□□□□□ -2.08
ACTN1-215ENST00000555616 PRM1P04553 51 aa2.05□□□□□ -2.08
ACTN1-215ENST00000555616 KRTAP21-2Q3LI59 83 aa1.91□□□□□ -2.1
ACTN1-215ENST00000555616 PHGR1C9JFL3 82 aa1.87□□□□□ -2.11
ACTN1-215ENST00000555616 KRTAP4-4Q9BYR3 166 aa1.71□□□□□ -2.14
ACTN1-215ENST00000555616 MUC19Q7Z5P9 8384 aa1.6□□□□□ -2.15
ACTN1-215ENST00000555616 KRTAP21-1Q3LI58 79 aa1.46□□□□□ -2.18
ACTN1-215ENST00000555616 MUC16Q8WXI7 14507 aa1.16□□□□□ -2.22
Retrieved 78 of 20,778 RNA–protein pairs in 149.5 ms