RNA–Protein interactions for RNA: ENST00000555498.5

KTN1-221, Transcript of kinectin 1, humanhuman

APPRIS ALT2 TSL 3

Gene KTN1, Length 595 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KTN1-221ENST00000555498 TNP1P09430 55 aa6.93□□□□□ -1.3
KTN1-221ENST00000555498 LCE3AQ5TA76 89 aa6.93□□□□□ -1.3
KTN1-221ENST00000555498 AHNAK2Q8IVF2 5795 aa6.91□□□□□ -1.3
KTN1-221ENST00000555498 A0A1B0GU69 56 aa6.91□□□□□ -1.3
KTN1-221ENST00000555498 COX7CP15954 63 aa6.9□□□□□ -1.3
KTN1-221ENST00000555498 H7BZZ5 65 aa6.87□□□□□ -1.31
KTN1-221ENST00000555498 KRTAP5-10Q6L8G5 202 aa6.87□□□□□ -1.31
KTN1-221ENST00000555498 A8MU10 97 aa6.86□□□□□ -1.31
KTN1-221ENST00000555498 KRTAP4-7Q9BYR0 210 aa6.77□□□□□ -1.33
KTN1-221ENST00000555498 KRTAP19-4Q3LI73 84 aa6.74□□□□□ -1.33
KTN1-221ENST00000555498 KRTAP12-3P60328 96 aa6.7□□□□□ -1.34
KTN1-221ENST00000555498 KRTAP5-7Q6L8G8 165 aa6.67□□□□□ -1.34
KTN1-221ENST00000555498 KRTAP5-3Q6L8H2 238 aa6.66□□□□□ -1.34
KTN1-221ENST00000555498 PRR15LQ9BU68 103 aa6.64□□□□□ -1.35
KTN1-221ENST00000555498 KRTAP20-2Q3LI61 65 aa6.6□□□□□ -1.35
KTN1-221ENST00000555498 SPRR5A0A1B0GTR4 108 aa6.58□□□□□ -1.36
KTN1-221ENST00000555498 KRTAP5-5Q701N2 237 aaPredicted RBP6.56□□□□□ -1.36
KTN1-221ENST00000555498 KRTAP12-4P60329 112 aa6.53□□□□□ -1.36
KTN1-221ENST00000555498 KRTAP4-2Q9BYR5 136 aa6.49□□□□□ -1.37
KTN1-221ENST00000555498 ANAPC13Q9BS18 74 aa6.47□□□□□ -1.37
KTN1-221ENST00000555498 LINC01558Q9Y6Z2 57 aa6.46□□□□□ -1.38
KTN1-221ENST00000555498 ATP5EP56381 51 aaPredicted RBP6.43□□□□□ -1.38
KTN1-221ENST00000555498 KRTAP4-11Q9BYQ6 195 aa6.43□□□□□ -1.38
KTN1-221ENST00000555498 UQCR11O14957 56 aa6.4□□□□□ -1.38
KTN1-221ENST00000555498 KRTAP25-1Q3LHN0 102 aa6.4□□□□□ -1.38
KTN1-221ENST00000555498 CCDC179H3BU77 68 aa6.32□□□□□ -1.4
KTN1-221ENST00000555498 SYNE1Q8NF91 8797 aaKnown RBP6.26□□□□□ -1.41
KTN1-221ENST00000555498 K7ERS5 55 aa6.21□□□□□ -1.42
KTN1-221ENST00000555498 MIR22HGQ0VDD5 57 aa6.2□□□□□ -1.42
KTN1-221ENST00000555498 KRTAP15-1Q3LI76 137 aa6.17□□□□□ -1.42
KTN1-221ENST00000555498 KRTAP23-1A1A580 65 aa6.16□□□□□ -1.42
KTN1-221ENST00000555498 LCE3CQ5T5A8 94 aa6.14□□□□□ -1.43
KTN1-221ENST00000555498 TMEM258P61165 79 aa6.11□□□□□ -1.43
KTN1-221ENST00000555498 KRTAP5-2Q701N4 177 aa6.06□□□□□ -1.44
KTN1-221ENST00000555498 MT1AP04731 61 aa6.04□□□□□ -1.44
KTN1-221ENST00000555498 KRTAP6-1Q3LI64 71 aa6□□□□□ -1.45
KTN1-221ENST00000555498 KRTAP5-8O75690 187 aa5.9□□□□□ -1.46
KTN1-221ENST00000555498 V9GYY9 64 aa5.9□□□□□ -1.46
KTN1-221ENST00000555498 PSPHP1O15172 72 aa5.88□□□□□ -1.47
KTN1-221ENST00000555498 Q1T7F1 81 aa5.8□□□□□ -1.48
KTN1-221ENST00000555498 KRTAP6-2Q3LI66 62 aa5.8□□□□□ -1.48
KTN1-221ENST00000555498 CDC42SE1Q9NRR8 79 aa5.79□□□□□ -1.48
KTN1-221ENST00000555498 PCP4P48539 62 aa5.78□□□□□ -1.48
KTN1-221ENST00000555498 RPS28P62857 69 aaKnown RBP5.77□□□□□ -1.49
KTN1-221ENST00000555498 MUC5ACP98088 5654 aa5.76□□□□□ -1.49
KTN1-221ENST00000555498 AHNAKQ09666 5890 aaKnown RBP5.76□□□□□ -1.49
KTN1-221ENST00000555498 KRTAP9-6A8MVA2 160 aa5.75□□□□□ -1.49
KTN1-221ENST00000555498 OBSCNQ5VST9 7968 aa5.74□□□□□ -1.49
KTN1-221ENST00000555498 MUC5BQ9HC84 5762 aaPredicted RBP5.71□□□□□ -1.49
KTN1-221ENST00000555498 A6NED7 52 aa5.69□□□□□ -1.5
KTN1-221ENST00000555498 ROMO1P60602 79 aa5.67□□□□□ -1.5
KTN1-221ENST00000555498 MT3P25713 68 aa5.57□□□□□ -1.52
KTN1-221ENST00000555498 KRTAP5-1Q6L8H4 278 aa5.49□□□□□ -1.53
KTN1-221ENST00000555498 LCE1EQ5T753 118 aa5.19□□□□□ -1.58
KTN1-221ENST00000555498 LCE1BQ5T7P3 118 aa4.88□□□□□ -1.63
KTN1-221ENST00000555498 LCE1CQ5T751 118 aa4.81□□□□□ -1.64
KTN1-221ENST00000555498 BRK1Q8WUW1 75 aa4.71□□□□□ -1.66
KTN1-221ENST00000555498 PRO0628Q9UI54 55 aa4.64□□□□□ -1.67
KTN1-221ENST00000555498 PMAIP1Q13794 54 aa4.44□□□□□ -1.7
KTN1-221ENST00000555498 LCE3DQ9BYE3 92 aa4.38□□□□□ -1.71
KTN1-221ENST00000555498 KRTAP5-11Q6L8G4 156 aa4.37□□□□□ -1.71
KTN1-221ENST00000555498 LCE1FQ5T754 118 aa4.35□□□□□ -1.71
KTN1-221ENST00000555498 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.33□□□□□ -1.72
KTN1-221ENST00000555498 SVIPQ8NHG7 77 aa4.31□□□□□ -1.72
KTN1-221ENST00000555498 KTN1-AS1Q86SY8 53 aa4.3□□□□□ -1.72
KTN1-221ENST00000555498 PRAC1Q96KF2 57 aa4.18□□□□□ -1.74
KTN1-221ENST00000555498 LCE3EQ5T5B0 92 aa4.07□□□□□ -1.76
KTN1-221ENST00000555498 A0A0A0MQY5 61 aa4.04□□□□□ -1.76
KTN1-221ENST00000555498 PHGR1C9JFL3 82 aa4.03□□□□□ -1.76
KTN1-221ENST00000555498 KRTAP21-2Q3LI59 83 aa3.96□□□□□ -1.78
KTN1-221ENST00000555498 KRTAP4-4Q9BYR3 166 aa3.65□□□□□ -1.83
KTN1-221ENST00000555498 LUZP6Q538Z0 58 aa3.62□□□□□ -1.83
KTN1-221ENST00000555498 MUC19Q7Z5P9 8384 aa3.55□□□□□ -1.84
KTN1-221ENST00000555498 NDUFAF8A1L188 74 aa3.36□□□□□ -1.87
KTN1-221ENST00000555498 KRTAP21-1Q3LI58 79 aa3.08□□□□□ -1.92
KTN1-221ENST00000555498 PRM1P04553 51 aa2.85□□□□□ -1.95
KTN1-221ENST00000555498 INE1O15225 51 aa2.76□□□□□ -1.97
KTN1-221ENST00000555498 MUC16Q8WXI7 14507 aa2.45□□□□□ -2.02
Retrieved 78 of 20,778 RNA–protein pairs in 59.1 ms