RNA–Protein interactions for RNA: ENST00000555269.5

TRAPPC6B-205, Transcript of trafficking protein particle complex 6B, humanhuman

TSL 1 (best)

Gene TRAPPC6B, Length 1,000 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC6B-205ENST00000555269 A0A0A0MQY5 61 aa4.71□□□□□ -1.66
TRAPPC6B-205ENST00000555269 LINC01558Q9Y6Z2 57 aa4.68□□□□□ -1.66
TRAPPC6B-205ENST00000555269 KRTAP19-7Q3SYF9 63 aa4.66□□□□□ -1.66
TRAPPC6B-205ENST00000555269 PRR15LQ9BU68 103 aa4.66□□□□□ -1.66
TRAPPC6B-205ENST00000555269 TMEM258P61165 79 aa4.65□□□□□ -1.67
TRAPPC6B-205ENST00000555269 KRTAP2-1Q9BYU5 128 aa4.65□□□□□ -1.67
TRAPPC6B-205ENST00000555269 MT1EP04732 61 aa4.61□□□□□ -1.67
TRAPPC6B-205ENST00000555269 C10orf95Q9H7T3 257 aa4.61□□□□□ -1.67
TRAPPC6B-205ENST00000555269 KRTAP19-5Q3LI72 72 aa4.59□□□□□ -1.67
TRAPPC6B-205ENST00000555269 MT3P25713 68 aa4.57□□□□□ -1.68
TRAPPC6B-205ENST00000555269 KRTAP5-11Q6L8G4 156 aa4.56□□□□□ -1.68
TRAPPC6B-205ENST00000555269 KRTAP19-3Q7Z4W3 81 aa4.54□□□□□ -1.68
TRAPPC6B-205ENST00000555269 UQCR11O14957 56 aa4.53□□□□□ -1.68
TRAPPC6B-205ENST00000555269 TNP1P09430 55 aa4.51□□□□□ -1.69
TRAPPC6B-205ENST00000555269 LCE3AQ5TA76 89 aa4.51□□□□□ -1.69
TRAPPC6B-205ENST00000555269 LCE1EQ5T753 118 aa4.46□□□□□ -1.7
TRAPPC6B-205ENST00000555269 MT1GP13640 62 aa4.45□□□□□ -1.7
TRAPPC6B-205ENST00000555269 MIR22HGQ0VDD5 57 aa4.45□□□□□ -1.7
TRAPPC6B-205ENST00000555269 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.45□□□□□ -1.7
TRAPPC6B-205ENST00000555269 DSTQ03001 7570 aaKnown RBP4.44□□□□□ -1.7
TRAPPC6B-205ENST00000555269 PSPHP1O15172 72 aa4.44□□□□□ -1.7
TRAPPC6B-205ENST00000555269 MT1LQ93083 61 aa4.43□□□□□ -1.7
TRAPPC6B-205ENST00000555269 Q1T7F1 81 aa4.4□□□□□ -1.71
TRAPPC6B-205ENST00000555269 V9GYY9 64 aa4.39□□□□□ -1.71
TRAPPC6B-205ENST00000555269 MT1MQ8N339 61 aa4.38□□□□□ -1.71
TRAPPC6B-205ENST00000555269 PP632Q6XCG6 107 aa4.37□□□□□ -1.71
TRAPPC6B-205ENST00000555269 RPS28P62857 69 aaKnown RBP4.34□□□□□ -1.71
TRAPPC6B-205ENST00000555269 KRTAP4-3Q9BYR4 195 aa4.34□□□□□ -1.71
TRAPPC6B-205ENST00000555269 KRTAP12-3P60328 96 aa4.32□□□□□ -1.72
TRAPPC6B-205ENST00000555269 K7ERS5 55 aa4.3□□□□□ -1.72
TRAPPC6B-205ENST00000555269 PRO0628Q9UI54 55 aa4.3□□□□□ -1.72
TRAPPC6B-205ENST00000555269 KRTAP25-1Q3LHN0 102 aa4.28□□□□□ -1.72
TRAPPC6B-205ENST00000555269 A6NED7 52 aa4.25□□□□□ -1.73
TRAPPC6B-205ENST00000555269 LCE1FQ5T754 118 aa4.23□□□□□ -1.73
TRAPPC6B-205ENST00000555269 MT4P47944 62 aa4.16□□□□□ -1.74
TRAPPC6B-205ENST00000555269 KRTAP5-4Q6L8H1 288 aa4.12□□□□□ -1.75
TRAPPC6B-205ENST00000555269 HMCN1Q96RW7 5635 aa4.11□□□□□ -1.75
TRAPPC6B-205ENST00000555269 CDC42SE1Q9NRR8 79 aa4.1□□□□□ -1.75
TRAPPC6B-205ENST00000555269 ROMO1P60602 79 aa4.07□□□□□ -1.76
TRAPPC6B-205ENST00000555269 PMAIP1Q13794 54 aa4.07□□□□□ -1.76
TRAPPC6B-205ENST00000555269 GPR98Q8WXG9 6306 aa4.07□□□□□ -1.76
TRAPPC6B-205ENST00000555269 KRTAP9-6A8MVA2 160 aa4.01□□□□□ -1.77
TRAPPC6B-205ENST00000555269 LCE3CQ5T5A8 94 aa4□□□□□ -1.77
TRAPPC6B-205ENST00000555269 KRTAP5-5Q701N2 237 aaPredicted RBP4□□□□□ -1.77
TRAPPC6B-205ENST00000555269 BRK1Q8WUW1 75 aa3.97□□□□□ -1.77
TRAPPC6B-205ENST00000555269 AHNAK2Q8IVF2 5795 aa3.95□□□□□ -1.78
TRAPPC6B-205ENST00000555269 KRTAP20-2Q3LI61 65 aa3.89□□□□□ -1.79
TRAPPC6B-205ENST00000555269 KRTAP5-1Q6L8H4 278 aa3.89□□□□□ -1.79
TRAPPC6B-205ENST00000555269 KTN1-AS1Q86SY8 53 aa3.89□□□□□ -1.79
TRAPPC6B-205ENST00000555269 SYNE1Q8NF91 8797 aaKnown RBP3.89□□□□□ -1.79
TRAPPC6B-205ENST00000555269 PRAC1Q96KF2 57 aa3.88□□□□□ -1.79
TRAPPC6B-205ENST00000555269 KRTAP12-4P60329 112 aa3.87□□□□□ -1.79
TRAPPC6B-205ENST00000555269 NDUFAF8A1L188 74 aa3.86□□□□□ -1.79
TRAPPC6B-205ENST00000555269 SPRR5A0A1B0GTR4 108 aa3.85□□□□□ -1.79
TRAPPC6B-205ENST00000555269 KRTAP5-10Q6L8G5 202 aa3.83□□□□□ -1.8
TRAPPC6B-205ENST00000555269 KRTAP6-1Q3LI64 71 aa3.76□□□□□ -1.81
TRAPPC6B-205ENST00000555269 MT1AP04731 61 aa3.75□□□□□ -1.81
TRAPPC6B-205ENST00000555269 KRTAP4-4Q9BYR3 166 aa3.72□□□□□ -1.81
TRAPPC6B-205ENST00000555269 KRTAP5-7Q6L8G8 165 aa3.65□□□□□ -1.83
TRAPPC6B-205ENST00000555269 LCE3EQ5T5B0 92 aa3.64□□□□□ -1.83
TRAPPC6B-205ENST00000555269 KRTAP5-2Q701N4 177 aa3.62□□□□□ -1.83
TRAPPC6B-205ENST00000555269 KRTAP6-2Q3LI66 62 aa3.58□□□□□ -1.84
TRAPPC6B-205ENST00000555269 KRTAP5-8O75690 187 aa3.42□□□□□ -1.86
TRAPPC6B-205ENST00000555269 OBSCNQ5VST9 7968 aa3.41□□□□□ -1.86
TRAPPC6B-205ENST00000555269 LUZP6Q538Z0 58 aa3.25□□□□□ -1.89
TRAPPC6B-205ENST00000555269 MUC5BQ9HC84 5762 aaPredicted RBP3.22□□□□□ -1.89
TRAPPC6B-205ENST00000555269 AHNAKQ09666 5890 aaKnown RBP3.22□□□□□ -1.89
TRAPPC6B-205ENST00000555269 MUC5ACP98088 5654 aa3.18□□□□□ -1.9
TRAPPC6B-205ENST00000555269 LCE1BQ5T7P3 118 aa2.98□□□□□ -1.93
TRAPPC6B-205ENST00000555269 LCE1CQ5T751 118 aa2.94□□□□□ -1.94
TRAPPC6B-205ENST00000555269 LCE3DQ9BYE3 92 aa2.93□□□□□ -1.94
TRAPPC6B-205ENST00000555269 INE1O15225 51 aa2.73□□□□□ -1.97
TRAPPC6B-205ENST00000555269 KRTAP21-2Q3LI59 83 aa2.47□□□□□ -2.01
TRAPPC6B-205ENST00000555269 MUC19Q7Z5P9 8384 aa2.45□□□□□ -2.02
TRAPPC6B-205ENST00000555269 PHGR1C9JFL3 82 aa2.26□□□□□ -2.05
TRAPPC6B-205ENST00000555269 PRM1P04553 51 aa2.1□□□□□ -2.07
TRAPPC6B-205ENST00000555269 KRTAP21-1Q3LI58 79 aa1.67□□□□□ -2.14
TRAPPC6B-205ENST00000555269 MUC16Q8WXI7 14507 aa1.47□□□□□ -2.17
Retrieved 78 of 20,778 RNA–protein pairs in 112.3 ms