RNA–Protein interactions for RNA: ENST00000555215.5

HNRNPC-218, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 5

Gene HNRNPC, Length 781 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-218ENST00000555215 KRTAP23-1A1A580 65 aa3.48□□□□□ -1.85
HNRNPC-218ENST00000555215 LCE3AQ5TA76 89 aa3.48□□□□□ -1.85
HNRNPC-218ENST00000555215 C10orf95Q9H7T3 257 aa3.48□□□□□ -1.85
HNRNPC-218ENST00000555215 A0A1B0GU33 70 aa3.45□□□□□ -1.86
HNRNPC-218ENST00000555215 SERP1Q9Y6X1 66 aa3.44□□□□□ -1.86
HNRNPC-218ENST00000555215 SERP2Q8N6R1 65 aa3.43□□□□□ -1.86
HNRNPC-218ENST00000555215 A8MU10 97 aa3.41□□□□□ -1.86
HNRNPC-218ENST00000555215 SEC61GP60059 68 aa3.41□□□□□ -1.86
HNRNPC-218ENST00000555215 KRTAP5-7Q6L8G8 165 aa3.41□□□□□ -1.86
HNRNPC-218ENST00000555215 K7ERU9 68 aa3.39□□□□□ -1.87
HNRNPC-218ENST00000555215 KRTAP20-2Q3LI61 65 aa3.36□□□□□ -1.87
HNRNPC-218ENST00000555215 TNP1P09430 55 aa3.34□□□□□ -1.87
HNRNPC-218ENST00000555215 KRTAP5-5Q701N2 237 aaPredicted RBP3.34□□□□□ -1.87
HNRNPC-218ENST00000555215 KRTAP15-1Q3LI76 137 aa3.32□□□□□ -1.88
HNRNPC-218ENST00000555215 SMIM26A0A096LP01 95 aa3.31□□□□□ -1.88
HNRNPC-218ENST00000555215 KRTAP12-3P60328 96 aa3.31□□□□□ -1.88
HNRNPC-218ENST00000555215 SYNE1Q8NF91 8797 aaKnown RBP3.3□□□□□ -1.88
HNRNPC-218ENST00000555215 H7BZZ5 65 aa3.3□□□□□ -1.88
HNRNPC-218ENST00000555215 SPRR5A0A1B0GTR4 108 aa3.28□□□□□ -1.88
HNRNPC-218ENST00000555215 A0A1B0GU69 56 aa3.27□□□□□ -1.89
HNRNPC-218ENST00000555215 COX7CP15954 63 aa3.26□□□□□ -1.89
HNRNPC-218ENST00000555215 KRTAP12-4P60329 112 aa3.22□□□□□ -1.89
HNRNPC-218ENST00000555215 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.18□□□□□ -1.9
HNRNPC-218ENST00000555215 KRTAP5-2Q701N4 177 aa3.08□□□□□ -1.92
HNRNPC-218ENST00000555215 LINC01558Q9Y6Z2 57 aa3.08□□□□□ -1.92
HNRNPC-218ENST00000555215 KRTAP6-1Q3LI64 71 aa3.06□□□□□ -1.92
HNRNPC-218ENST00000555215 PRR15LQ9BU68 103 aa3.06□□□□□ -1.92
HNRNPC-218ENST00000555215 CCDC179H3BU77 68 aa3.05□□□□□ -1.92
HNRNPC-218ENST00000555215 KRTAP25-1Q3LHN0 102 aa3.05□□□□□ -1.92
HNRNPC-218ENST00000555215 KRTAP5-8O75690 187 aa3.03□□□□□ -1.92
HNRNPC-218ENST00000555215 LCE3CQ5T5A8 94 aa3.03□□□□□ -1.92
HNRNPC-218ENST00000555215 MT1AP04731 61 aa3.02□□□□□ -1.93
HNRNPC-218ENST00000555215 ANAPC13Q9BS18 74 aa3.01□□□□□ -1.93
HNRNPC-218ENST00000555215 AHNAKQ09666 5890 aaKnown RBP3.01□□□□□ -1.93
HNRNPC-218ENST00000555215 MUC5BQ9HC84 5762 aaPredicted RBP3□□□□□ -1.93
HNRNPC-218ENST00000555215 UQCR11O14957 56 aa2.99□□□□□ -1.93
HNRNPC-218ENST00000555215 MUC5ACP98088 5654 aa2.98□□□□□ -1.93
HNRNPC-218ENST00000555215 KRTAP5-11Q6L8G4 156 aa2.97□□□□□ -1.93
HNRNPC-218ENST00000555215 KRTAP9-6A8MVA2 160 aa2.96□□□□□ -1.94
HNRNPC-218ENST00000555215 KRTAP6-2Q3LI66 62 aa2.95□□□□□ -1.94
HNRNPC-218ENST00000555215 OBSCNQ5VST9 7968 aa2.94□□□□□ -1.94
HNRNPC-218ENST00000555215 ATP5EP56381 51 aaPredicted RBP2.93□□□□□ -1.94
HNRNPC-218ENST00000555215 MIR22HGQ0VDD5 57 aa2.93□□□□□ -1.94
HNRNPC-218ENST00000555215 K7ERS5 55 aa2.82□□□□□ -1.96
HNRNPC-218ENST00000555215 PSPHP1O15172 72 aa2.81□□□□□ -1.96
HNRNPC-218ENST00000555215 TMEM258P61165 79 aa2.81□□□□□ -1.96
HNRNPC-218ENST00000555215 KRTAP5-1Q6L8H4 278 aa2.81□□□□□ -1.96
HNRNPC-218ENST00000555215 SVIPQ8NHG7 77 aa2.81□□□□□ -1.96
HNRNPC-218ENST00000555215 MT3P25713 68 aa2.74□□□□□ -1.97
HNRNPC-218ENST00000555215 Q1T7F1 81 aa2.74□□□□□ -1.97
HNRNPC-218ENST00000555215 CDC42SE1Q9NRR8 79 aa2.7□□□□□ -1.98
HNRNPC-218ENST00000555215 RPS28P62857 69 aaKnown RBP2.69□□□□□ -1.98
HNRNPC-218ENST00000555215 A0A0A0MQY5 61 aa2.68□□□□□ -1.98
HNRNPC-218ENST00000555215 ROMO1P60602 79 aa2.68□□□□□ -1.98
HNRNPC-218ENST00000555215 KRTAP4-4Q9BYR3 166 aa2.66□□□□□ -1.98
HNRNPC-218ENST00000555215 V9GYY9 64 aa2.66□□□□□ -1.98
HNRNPC-218ENST00000555215 PCP4P48539 62 aa2.65□□□□□ -1.99
HNRNPC-218ENST00000555215 A6NED7 52 aa2.64□□□□□ -1.99
HNRNPC-218ENST00000555215 LCE1EQ5T753 118 aa2.56□□□□□ -2
HNRNPC-218ENST00000555215 LCE1BQ5T7P3 118 aa2.47□□□□□ -2.01
HNRNPC-218ENST00000555215 LCE1CQ5T751 118 aa2.38□□□□□ -2.03
HNRNPC-218ENST00000555215 LCE1FQ5T754 118 aa2.38□□□□□ -2.03
HNRNPC-218ENST00000555215 PRAC1Q96KF2 57 aa2.18□□□□□ -2.06
HNRNPC-218ENST00000555215 LCE3DQ9BYE3 92 aa2.12□□□□□ -2.07
HNRNPC-218ENST00000555215 NDUFAF8A1L188 74 aa2.1□□□□□ -2.07
HNRNPC-218ENST00000555215 PHGR1C9JFL3 82 aa2.05□□□□□ -2.08
HNRNPC-218ENST00000555215 LCE3EQ5T5B0 92 aa2.03□□□□□ -2.08
HNRNPC-218ENST00000555215 KRTAP21-2Q3LI59 83 aa2.02□□□□□ -2.09
HNRNPC-218ENST00000555215 BRK1Q8WUW1 75 aa2.02□□□□□ -2.09
HNRNPC-218ENST00000555215 PMAIP1Q13794 54 aa1.87□□□□□ -2.11
HNRNPC-218ENST00000555215 MUC19Q7Z5P9 8384 aa1.85□□□□□ -2.11
HNRNPC-218ENST00000555215 LUZP6Q538Z0 58 aa1.53□□□□□ -2.16
HNRNPC-218ENST00000555215 PRO0628Q9UI54 55 aa1.53□□□□□ -2.16
HNRNPC-218ENST00000555215 KRTAP21-1Q3LI58 79 aa1.52□□□□□ -2.17
HNRNPC-218ENST00000555215 KTN1-AS1Q86SY8 53 aa1.5□□□□□ -2.17
HNRNPC-218ENST00000555215 PRM1P04553 51 aa1.39□□□□□ -2.19
HNRNPC-218ENST00000555215 MUC16Q8WXI7 14507 aa1.27□□□□□ -2.21
HNRNPC-218ENST00000555215 INE1O15225 51 aa0.85□□□□□ -2.27
Retrieved 78 of 20,778 RNA–protein pairs in 5.4 ms