RNA–Protein interactions for RNA: ENST00000555082.5

PRKCH-211, Transcript of protein kinase C eta, humanhuman

TSL 1 (best) BASIC

Gene PRKCH, Length 2,932 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-211ENST00000555082 KRTAP9-6A8MVA2 160 aa3.54□□□□□ -1.84
PRKCH-211ENST00000555082 MT1EP04732 61 aa3.51□□□□□ -1.85
PRKCH-211ENST00000555082 KRTAP4-7Q9BYR0 210 aa3.5□□□□□ -1.85
PRKCH-211ENST00000555082 SPRR2FQ96RM1 72 aa3.5□□□□□ -1.85
PRKCH-211ENST00000555082 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.48□□□□□ -1.85
PRKCH-211ENST00000555082 MT1LQ93083 61 aa3.43□□□□□ -1.86
PRKCH-211ENST00000555082 MDN1Q9NU22 5596 aa3.43□□□□□ -1.86
PRKCH-211ENST00000555082 KRTAP5-9P26371 169 aa3.38□□□□□ -1.87
PRKCH-211ENST00000555082 KRTAP2-3P0C7H8 128 aa3.37□□□□□ -1.87
PRKCH-211ENST00000555082 KRTAP2-4Q9BYR9 128 aa3.37□□□□□ -1.87
PRKCH-211ENST00000555082 KRTAP2-1Q9BYU5 128 aa3.37□□□□□ -1.87
PRKCH-211ENST00000555082 DSTQ03001 7570 aaKnown RBP3.37□□□□□ -1.87
PRKCH-211ENST00000555082 KRTAP4-3Q9BYR4 195 aa3.36□□□□□ -1.87
PRKCH-211ENST00000555082 KRTAP19-3Q7Z4W3 81 aa3.36□□□□□ -1.87
PRKCH-211ENST00000555082 KRTAP6-3Q3LI67 103 aa3.33□□□□□ -1.88
PRKCH-211ENST00000555082 LCE1AQ5T7P2 110 aa3.32□□□□□ -1.88
PRKCH-211ENST00000555082 SPRR2EP22531 72 aa3.3□□□□□ -1.88
PRKCH-211ENST00000555082 SPRR2BP35325 72 aa3.3□□□□□ -1.88
PRKCH-211ENST00000555082 SPRR2AP35326 72 aa3.3□□□□□ -1.88
PRKCH-211ENST00000555082 LCE5AQ5TCM9 118 aa3.3□□□□□ -1.88
PRKCH-211ENST00000555082 MT1MQ8N339 61 aa3.3□□□□□ -1.88
PRKCH-211ENST00000555082 KRTAP9-7A8MTY7 169 aa3.3□□□□□ -1.88
PRKCH-211ENST00000555082 MT1GP13640 62 aa3.3□□□□□ -1.88
PRKCH-211ENST00000555082 LOC100996750A0A140TA64 210 aa3.25□□□□□ -1.89
PRKCH-211ENST00000555082 NEBP20929 6669 aa3.18□□□□□ -1.9
PRKCH-211ENST00000555082 SPRR2DP22532 72 aa3.17□□□□□ -1.9
PRKCH-211ENST00000555082 KRTAP19-4Q3LI73 84 aa3.16□□□□□ -1.9
PRKCH-211ENST00000555082 KRTAP12-4P60329 112 aa3.13□□□□□ -1.91
PRKCH-211ENST00000555082 LCE3BQ5TA77 95 aa3.04□□□□□ -1.92
PRKCH-211ENST00000555082 KRTAP4-9Q9BYQ8 210 aa3.03□□□□□ -1.93
PRKCH-211ENST00000555082 SYNE1Q8NF91 8797 aaKnown RBP3.01□□□□□ -1.93
PRKCH-211ENST00000555082 LCE4AQ5TA78 99 aa2.96□□□□□ -1.94
PRKCH-211ENST00000555082 KRTAP9-4Q9BYQ2 154 aa2.96□□□□□ -1.94
PRKCH-211ENST00000555082 KRTAP5-5Q701N2 237 aaPredicted RBP2.95□□□□□ -1.94
PRKCH-211ENST00000555082 KRTAP6-1Q3LI64 71 aa2.93□□□□□ -1.94
PRKCH-211ENST00000555082 KRTAP20-1Q3LI63 56 aa2.89□□□□□ -1.95
PRKCH-211ENST00000555082 KRTAP9-9Q9BYP9 154 aa2.89□□□□□ -1.95
PRKCH-211ENST00000555082 MT1AP04731 61 aa2.89□□□□□ -1.95
PRKCH-211ENST00000555082 KRTAP2-2Q9BYT5 123 aa2.86□□□□□ -1.95
PRKCH-211ENST00000555082 MT4P47944 62 aa2.82□□□□□ -1.96
PRKCH-211ENST00000555082 KRTAP5-4Q6L8H1 288 aa2.81□□□□□ -1.96
PRKCH-211ENST00000555082 LCE3DQ9BYE3 92 aa2.81□□□□□ -1.96
PRKCH-211ENST00000555082 PRM1P04553 51 aa2.8□□□□□ -1.96
PRKCH-211ENST00000555082 KRTAP4-6Q9BYQ5 205 aa2.8□□□□□ -1.96
PRKCH-211ENST00000555082 OBSCNQ5VST9 7968 aa2.78□□□□□ -1.96
PRKCH-211ENST00000555082 LCE3EQ5T5B0 92 aa2.77□□□□□ -1.97
PRKCH-211ENST00000555082 LCE1DQ5T752 114 aa2.74□□□□□ -1.97
PRKCH-211ENST00000555082 HMCN1Q96RW7 5635 aa2.73□□□□□ -1.97
PRKCH-211ENST00000555082 KRTAP6-2Q3LI66 62 aa2.71□□□□□ -1.98
PRKCH-211ENST00000555082 KRTAP20-2Q3LI61 65 aa2.67□□□□□ -1.98
PRKCH-211ENST00000555082 MT3P25713 68 aa2.6□□□□□ -1.99
PRKCH-211ENST00000555082 LCE1FQ5T754 118 aa2.6□□□□□ -1.99
PRKCH-211ENST00000555082 KRTAP5-3Q6L8H2 238 aa2.56□□□□□ -2
PRKCH-211ENST00000555082 KRTAP5-2Q701N4 177 aa2.54□□□□□ -2
PRKCH-211ENST00000555082 KRTAP4-12Q9BQ66 201 aa2.51□□□□□ -2.01
PRKCH-211ENST00000555082 AHNAK2Q8IVF2 5795 aa2.39□□□□□ -2.03
PRKCH-211ENST00000555082 KRTAP4-11Q9BYQ6 195 aa2.32□□□□□ -2.04
PRKCH-211ENST00000555082 KRTAP5-10Q6L8G5 202 aa2.25□□□□□ -2.05
PRKCH-211ENST00000555082 KRTAP5-8O75690 187 aa2.24□□□□□ -2.05
PRKCH-211ENST00000555082 KRTAP5-1Q6L8H4 278 aa2.24□□□□□ -2.05
PRKCH-211ENST00000555082 LCE1EQ5T753 118 aa2.23□□□□□ -2.05
PRKCH-211ENST00000555082 LCE1BQ5T7P3 118 aa2.23□□□□□ -2.05
PRKCH-211ENST00000555082 GPR98Q8WXG9 6306 aa2.21□□□□□ -2.06
PRKCH-211ENST00000555082 MUC5ACP98088 5654 aa2.2□□□□□ -2.06
PRKCH-211ENST00000555082 KRTAP4-2Q9BYR5 136 aa2.15□□□□□ -2.06
PRKCH-211ENST00000555082 LCE1CQ5T751 118 aa2.09□□□□□ -2.08
PRKCH-211ENST00000555082 KRTAP5-7Q6L8G8 165 aa2.08□□□□□ -2.08
PRKCH-211ENST00000555082 MUC5BQ9HC84 5762 aaPredicted RBP2.03□□□□□ -2.08
PRKCH-211ENST00000555082 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.92□□□□□ -2.1
PRKCH-211ENST00000555082 KRTAP21-2Q3LI59 83 aa1.9□□□□□ -2.11
PRKCH-211ENST00000555082 KRTAP5-11Q6L8G4 156 aa1.84□□□□□ -2.11
PRKCH-211ENST00000555082 MUC19Q7Z5P9 8384 aa1.84□□□□□ -2.12
PRKCH-211ENST00000555082 KRTAP4-4Q9BYR3 166 aa1.8□□□□□ -2.12
PRKCH-211ENST00000555082 AHNAKQ09666 5890 aaKnown RBP1.78□□□□□ -2.12
PRKCH-211ENST00000555082 KRTAP21-1Q3LI58 79 aa1.7□□□□□ -2.14
PRKCH-211ENST00000555082 PHGR1C9JFL3 82 aa1.6□□□□□ -2.15
PRKCH-211ENST00000555082 MUC16Q8WXI7 14507 aa1.03□□□□□ -2.24
Retrieved 77 of 20,778 RNA–protein pairs in 1021.6 ms