RNA–Protein interactions for RNA: ENST00000555014.1

HIF1A-207, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 3

Gene HIF1A, Length 739 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-207ENST00000555014 TENM1Q9UKZ4 2725 aa1.48□□□□□ -2.17
HIF1A-207ENST00000555014 MGAM2Q2M2H8 2515 aa1.47□□□□□ -2.17
HIF1A-207ENST00000555014 DNAH5Q8TE73 4624 aa1.46□□□□□ -2.18
HIF1A-207ENST00000555014 PLECQ15149 4684 aaKnown RBP1.43□□□□□ -2.18
HIF1A-207ENST00000555014 SMR3BP02814 79 aaPredicted RBP1.43□□□□□ -2.18
HIF1A-207ENST00000555014 TNXBP22105 4242 aa1.42□□□□□ -2.18
HIF1A-207ENST00000555014 LRP1Q07954 4544 aaKnown RBP1.41□□□□□ -2.18
HIF1A-207ENST00000555014 J3QKU1 62 aa1.41□□□□□ -2.18
HIF1A-207ENST00000555014 GPR98Q8WXG9 6306 aa1.4□□□□□ -2.19
HIF1A-207ENST00000555014 RYR3Q15413 4870 aa1.4□□□□□ -2.19
HIF1A-207ENST00000555014 FAT2Q9NYQ8 4349 aa1.39□□□□□ -2.19
HIF1A-207ENST00000555014 DYNC1H1Q14204 4646 aaKnown RBP1.38□□□□□ -2.19
HIF1A-207ENST00000555014 BIRC6Q9NR09 4857 aa1.38□□□□□ -2.19
HIF1A-207ENST00000555014 PKHD1P08F94 4074 aa1.36□□□□□ -2.19
HIF1A-207ENST00000555014 EPPK1P58107 5090 aaKnown RBP1.36□□□□□ -2.19
HIF1A-207ENST00000555014 STARD9Q9P2P6 4700 aa1.35□□□□□ -2.19
HIF1A-207ENST00000555014 KRTAP19-5Q3LI72 72 aa1.35□□□□□ -2.19
HIF1A-207ENST00000555014 HYDINQ4G0P3 5121 aa1.35□□□□□ -2.19
HIF1A-207ENST00000555014 PRM1P04553 51 aa1.34□□□□□ -2.19
HIF1A-207ENST00000555014 LPAP08519 4548 aa1.32□□□□□ -2.2
HIF1A-207ENST00000555014 FSIP2Q5CZC0 6907 aa1.29□□□□□ -2.2
HIF1A-207ENST00000555014 RYR2Q92736 4967 aa1.29□□□□□ -2.2
HIF1A-207ENST00000555014 KMT2CQ8NEZ4 4911 aaKnown RBP1.28□□□□□ -2.2
HIF1A-207ENST00000555014 MACF1Q9UPN3 7388 aaKnown RBP1.28□□□□□ -2.2
HIF1A-207ENST00000555014 SPRR2GQ9BYE4 73 aa1.28□□□□□ -2.2
HIF1A-207ENST00000555014 ABCA13Q86UQ4 5058 aa1.27□□□□□ -2.21
HIF1A-207ENST00000555014 MT1AP04731 61 aa1.24□□□□□ -2.21
HIF1A-207ENST00000555014 FAT1Q14517 4588 aa1.23□□□□□ -2.21
HIF1A-207ENST00000555014 MUC17Q685J3 4493 aa1.23□□□□□ -2.21
HIF1A-207ENST00000555014 HERC1Q15751 4861 aa1.23□□□□□ -2.21
HIF1A-207ENST00000555014 SYNE2Q8WXH0 6885 aaKnown RBP1.21□□□□□ -2.22
HIF1A-207ENST00000555014 NEBP20929 6669 aa1.21□□□□□ -2.22
HIF1A-207ENST00000555014 LRP1BQ9NZR2 4599 aa1.2□□□□□ -2.22
HIF1A-207ENST00000555014 HERC2O95714 4834 aa1.19□□□□□ -2.22
HIF1A-207ENST00000555014 KRTAP19-2Q3LHN2 52 aa1.19□□□□□ -2.22
HIF1A-207ENST00000555014 FAT4Q6V0I7 4981 aa1.18□□□□□ -2.22
HIF1A-207ENST00000555014 SYNE1Q8NF91 8797 aaKnown RBP1.16□□□□□ -2.22
HIF1A-207ENST00000555014 MT1XP80297 61 aa1.16□□□□□ -2.22
HIF1A-207ENST00000555014 KRTAP19-8Q3LI54 63 aa1.16□□□□□ -2.22
HIF1A-207ENST00000555014 SSPOA2VEC9 5147 aa1.16□□□□□ -2.22
HIF1A-207ENST00000555014 MT1EP04732 61 aa1.14□□□□□ -2.23
HIF1A-207ENST00000555014 KRTAP6-2Q3LI66 62 aa1.14□□□□□ -2.23
HIF1A-207ENST00000555014 AHNAK2Q8IVF2 5795 aa1.13□□□□□ -2.23
HIF1A-207ENST00000555014 SPRR2DP22532 72 aa1.11□□□□□ -2.23
HIF1A-207ENST00000555014 SPRR2BP35325 72 aa1.11□□□□□ -2.23
HIF1A-207ENST00000555014 MT1LQ93083 61 aa1.11□□□□□ -2.23
HIF1A-207ENST00000555014 SPRR2FQ96RM1 72 aa1.11□□□□□ -2.23
HIF1A-207ENST00000555014 SPRR2AP35326 72 aa1.1□□□□□ -2.23
HIF1A-207ENST00000555014 KRTAP20-1Q3LI63 56 aa1.1□□□□□ -2.23
HIF1A-207ENST00000555014 LRP2P98164 4655 aa1.09□□□□□ -2.23
HIF1A-207ENST00000555014 DSTQ03001 7570 aaKnown RBP1.08□□□□□ -2.24
HIF1A-207ENST00000555014 RNF213Q63HN8 5207 aa1.07□□□□□ -2.24
HIF1A-207ENST00000555014 AHNAKQ09666 5890 aaKnown RBP1.07□□□□□ -2.24
HIF1A-207ENST00000555014 MT1BP07438 61 aa1.06□□□□□ -2.24
HIF1A-207ENST00000555014 KRTAP19-3Q7Z4W3 81 aa1.05□□□□□ -2.24
HIF1A-207ENST00000555014 HMCN2Q8NDA2 5059 aa1.05□□□□□ -2.24
HIF1A-207ENST00000555014 SPRR2EP22531 72 aa1.04□□□□□ -2.24
HIF1A-207ENST00000555014 MT1HL1P0DM35 61 aa1.03□□□□□ -2.24
HIF1A-207ENST00000555014 KRTAP19-7Q3SYF9 63 aa1.03□□□□□ -2.24
HIF1A-207ENST00000555014 KMT2DO14686 5537 aa1.02□□□□□ -2.25
HIF1A-207ENST00000555014 MUC5BQ9HC84 5762 aaPredicted RBP1□□□□□ -2.25
HIF1A-207ENST00000555014 MT1HP80294 61 aa1□□□□□ -2.25
HIF1A-207ENST00000555014 KRTAP21-1Q3LI58 79 aa0.97□□□□□ -2.25
HIF1A-207ENST00000555014 MT1GP13640 62 aa0.95□□□□□ -2.26
HIF1A-207ENST00000555014 MT2AP02795 61 aa0.94□□□□□ -2.26
HIF1A-207ENST00000555014 MT1FP04733 61 aa0.94□□□□□ -2.26
HIF1A-207ENST00000555014 KRTAP5-10Q6L8G5 202 aa0.93□□□□□ -2.26
HIF1A-207ENST00000555014 MUC16Q8WXI7 14507 aa0.91□□□□□ -2.26
HIF1A-207ENST00000555014 MUC5ACP98088 5654 aa0.89□□□□□ -2.27
HIF1A-207ENST00000555014 MT1MQ8N339 61 aa0.89□□□□□ -2.27
HIF1A-207ENST00000555014 MUC12Q9UKN1 5478 aa0.88□□□□□ -2.27
HIF1A-207ENST00000555014 MDN1Q9NU22 5596 aa0.88□□□□□ -2.27
HIF1A-207ENST00000555014 KRTAP6-1Q3LI64 71 aa0.87□□□□□ -2.27
HIF1A-207ENST00000555014 USH2AO75445 5202 aa0.87□□□□□ -2.27
HIF1A-207ENST00000555014 KRTAP19-6Q3LI70 58 aa0.55□□□□□ -2.32
HIF1A-207ENST00000555014 PHGR1C9JFL3 82 aa0.54□□□□□ -2.32
HIF1A-207ENST00000555014 MT4P47944 62 aa0.44□□□□□ -2.34
HIF1A-207ENST00000555014 KRTAP20-2Q3LI61 65 aa0.34□□□□□ -2.36
Retrieved 78 of 20,778 RNA–protein pairs in 39.4 ms