RNA–Protein interactions for RNA: ENST00000554995.1

PSEN1-211, Transcript of presenilin 1, humanhuman

TSL 2

Gene PSEN1, Length 592 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-211ENST00000554995 SPINK6Q6UWN8 80 aa1.35□□□□□ -2.19
PSEN1-211ENST00000554995 SSPOA2VEC9 5147 aa1.34□□□□□ -2.2
PSEN1-211ENST00000554995 ACYP2P14621 99 aa1.31□□□□□ -2.2
PSEN1-211ENST00000554995 KRTAP20-1Q3LI63 56 aa1.31□□□□□ -2.2
PSEN1-211ENST00000554995 LPAP08519 4548 aa1.31□□□□□ -2.2
PSEN1-211ENST00000554995 MUC17Q685J3 4493 aa1.3□□□□□ -2.2
PSEN1-211ENST00000554995 MT1HL1P0DM35 61 aa1.29□□□□□ -2.2
PSEN1-211ENST00000554995 PRR15LQ9BU68 103 aa1.29□□□□□ -2.2
PSEN1-211ENST00000554995 LINC01558Q9Y6Z2 57 aa1.29□□□□□ -2.2
PSEN1-211ENST00000554995 FLGP20930 4061 aaPredicted RBP1.29□□□□□ -2.2
PSEN1-211ENST00000554995 Q5VV11 94 aa1.28□□□□□ -2.2
PSEN1-211ENST00000554995 SPTSSBQ8NFR3 76 aa1.28□□□□□ -2.2
PSEN1-211ENST00000554995 CHKB-CPT1BH3BT56 60 aa1.27□□□□□ -2.21
PSEN1-211ENST00000554995 A0A0D9SG42 100 aa1.25□□□□□ -2.21
PSEN1-211ENST00000554995 RPL37P61927 97 aaKnown RBP1.25□□□□□ -2.21
PSEN1-211ENST00000554995 A0A1B0GU69 56 aa1.24□□□□□ -2.21
PSEN1-211ENST00000554995 UQCR11O14957 56 aa1.24□□□□□ -2.21
PSEN1-211ENST00000554995 SPINK7P58062 85 aa1.24□□□□□ -2.21
PSEN1-211ENST00000554995 COX6B2Q6YFQ2 88 aa1.24□□□□□ -2.21
PSEN1-211ENST00000554995 SPATA8Q6RVD6 105 aa1.23□□□□□ -2.21
PSEN1-211ENST00000554995 SYNE2Q8WXH0 6885 aaKnown RBP1.23□□□□□ -2.21
PSEN1-211ENST00000554995 USH2AO75445 5202 aa1.22□□□□□ -2.21
PSEN1-211ENST00000554995 C9orf92A6NGG3 77 aa1.22□□□□□ -2.21
PSEN1-211ENST00000554995 MACF1Q9UPN3 7388 aaKnown RBP1.2□□□□□ -2.22
PSEN1-211ENST00000554995 KRTAP2-3P0C7H8 128 aa1.2□□□□□ -2.22
PSEN1-211ENST00000554995 KRTAP2-4Q9BYR9 128 aa1.2□□□□□ -2.22
PSEN1-211ENST00000554995 NEBP20929 6669 aa1.2□□□□□ -2.22
PSEN1-211ENST00000554995 H1FX-AS1Q4G0G2 97 aa1.19□□□□□ -2.22
PSEN1-211ENST00000554995 H0YAA0 97 aa1.18□□□□□ -2.22
PSEN1-211ENST00000554995 S4R3F8 94 aa1.17□□□□□ -2.22
PSEN1-211ENST00000554995 M0QZ58 72 aa1.16□□□□□ -2.22
PSEN1-211ENST00000554995 C10orf95Q9H7T3 257 aa1.16□□□□□ -2.22
PSEN1-211ENST00000554995 KMT2DO14686 5537 aa1.16□□□□□ -2.22
PSEN1-211ENST00000554995 MUC12Q9UKN1 5478 aa1.15□□□□□ -2.22
PSEN1-211ENST00000554995 GPR98Q8WXG9 6306 aa1.15□□□□□ -2.23
PSEN1-211ENST00000554995 KRTAP2-1Q9BYU5 128 aa1.15□□□□□ -2.23
PSEN1-211ENST00000554995 MT1HP80294 61 aa1.13□□□□□ -2.23
PSEN1-211ENST00000554995 CRIPTQ9P021 101 aa1.12□□□□□ -2.23
PSEN1-211ENST00000554995 KRTAP19-2Q3LHN2 52 aa1.11□□□□□ -2.23
PSEN1-211ENST00000554995 KRTAP19-3Q7Z4W3 81 aa1.11□□□□□ -2.23
PSEN1-211ENST00000554995 M0R2T5 61 aa1.09□□□□□ -2.23
PSEN1-211ENST00000554995 KRTAP19-6Q3LI70 58 aa1.09□□□□□ -2.23
PSEN1-211ENST00000554995 MDN1Q9NU22 5596 aa1.07□□□□□ -2.24
PSEN1-211ENST00000554995 SPRR2GQ9BYE4 73 aa1.05□□□□□ -2.24
PSEN1-211ENST00000554995 KRTAP5-10Q6L8G5 202 aa1.04□□□□□ -2.24
PSEN1-211ENST00000554995 TNP1P09430 55 aa1.01□□□□□ -2.25
PSEN1-211ENST00000554995 SPRR2EP22531 72 aa1.01□□□□□ -2.25
PSEN1-211ENST00000554995 SPRR2BP35325 72 aa1.01□□□□□ -2.25
PSEN1-211ENST00000554995 SPRR2AP35326 72 aa1.01□□□□□ -2.25
PSEN1-211ENST00000554995 KRTAP19-8Q3LI54 63 aa1.01□□□□□ -2.25
PSEN1-211ENST00000554995 MT2AP02795 61 aa1□□□□□ -2.25
PSEN1-211ENST00000554995 DSTQ03001 7570 aaKnown RBP0.98□□□□□ -2.25
PSEN1-211ENST00000554995 MT1FP04733 61 aa0.98□□□□□ -2.25
PSEN1-211ENST00000554995 SPRR2DP22532 72 aa0.98□□□□□ -2.25
PSEN1-211ENST00000554995 AHNAK2Q8IVF2 5795 aa0.96□□□□□ -2.25
PSEN1-211ENST00000554995 MT1BP07438 61 aa0.95□□□□□ -2.26
PSEN1-211ENST00000554995 KRTAP8-1Q8IUC2 63 aa0.95□□□□□ -2.26
PSEN1-211ENST00000554995 MT1XP80297 61 aa0.94□□□□□ -2.26
PSEN1-211ENST00000554995 SPRR2FQ96RM1 72 aa0.94□□□□□ -2.26
PSEN1-211ENST00000554995 MUC16Q8WXI7 14507 aa0.89□□□□□ -2.27
PSEN1-211ENST00000554995 MT4P47944 62 aa0.88□□□□□ -2.27
PSEN1-211ENST00000554995 AHNAKQ09666 5890 aaKnown RBP0.88□□□□□ -2.27
PSEN1-211ENST00000554995 MUC5BQ9HC84 5762 aaPredicted RBP0.85□□□□□ -2.27
PSEN1-211ENST00000554995 KRTAP19-5Q3LI72 72 aa0.84□□□□□ -2.27
PSEN1-211ENST00000554995 KRTAP19-7Q3SYF9 63 aa0.84□□□□□ -2.27
PSEN1-211ENST00000554995 MUC5ACP98088 5654 aa0.84□□□□□ -2.28
PSEN1-211ENST00000554995 MT1EP04732 61 aa0.82□□□□□ -2.28
PSEN1-211ENST00000554995 MT1LQ93083 61 aa0.81□□□□□ -2.28
PSEN1-211ENST00000554995 MT1GP13640 62 aa0.8□□□□□ -2.28
PSEN1-211ENST00000554995 MT1MQ8N339 61 aa0.77□□□□□ -2.29
PSEN1-211ENST00000554995 KRTAP21-1Q3LI58 79 aa0.76□□□□□ -2.29
PSEN1-211ENST00000554995 KRTAP20-2Q3LI61 65 aa0.75□□□□□ -2.29
PSEN1-211ENST00000554995 SYNE1Q8NF91 8797 aaKnown RBP0.73□□□□□ -2.29
PSEN1-211ENST00000554995 MT1AP04731 61 aa0.71□□□□□ -2.3
PSEN1-211ENST00000554995 KRTAP6-1Q3LI64 71 aa0.66□□□□□ -2.3
PSEN1-211ENST00000554995 PHGR1C9JFL3 82 aa0.62□□□□□ -2.31
PSEN1-211ENST00000554995 KRTAP6-2Q3LI66 62 aa0.61□□□□□ -2.31
PSEN1-211ENST00000554995 PRM1P04553 51 aa0.56□□□□□ -2.32
Retrieved 78 of 20,778 RNA–protein pairs in 38.5 ms