RNA–Protein interactions for RNA: ENST00000554785.1

PRPF39-208, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 2,121 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-208ENST00000554785 C9JAW5 83 aa0.34□□□□□ -2.35
PRPF39-208ENST00000554785 TAX1BP3O14907 124 aa0.34□□□□□ -2.35
PRPF39-208ENST00000554785 NREPQ16612 68 aa0.34□□□□□ -2.35
PRPF39-208ENST00000554785 KRTAP6-2Q3LI66 62 aa0.34□□□□□ -2.35
PRPF39-208ENST00000554785 LINC01545Q5VT33 79 aa0.34□□□□□ -2.35
PRPF39-208ENST00000554785 TMEM256-PLSCR3K7ERE1 68 aa0.34□□□□□ -2.36
PRPF39-208ENST00000554785 KRTAP6-1Q3LI64 71 aa0.34□□□□□ -2.36
PRPF39-208ENST00000554785 PHGR1C9JFL3 82 aa0.33□□□□□ -2.36
PRPF39-208ENST00000554785 H0YGX0 51 aa0.33□□□□□ -2.36
PRPF39-208ENST00000554785 C14orf144Q96I85 54 aa0.33□□□□□ -2.36
PRPF39-208ENST00000554785 SPCS1Q9Y6A9 102 aa0.33□□□□□ -2.36
PRPF39-208ENST00000554785 ROMO1P60602 79 aa0.32□□□□□ -2.36
PRPF39-208ENST00000554785 HIST1H2BKO60814 126 aa0.32□□□□□ -2.36
PRPF39-208ENST00000554785 HIST1H2BJP06899 126 aa0.32□□□□□ -2.36
PRPF39-208ENST00000554785 ACYP1P07311 99 aa0.32□□□□□ -2.36
PRPF39-208ENST00000554785 C20orf197Q8N268 126 aa0.32□□□□□ -2.36
PRPF39-208ENST00000554785 SVBPQ8N300 66 aa0.32□□□□□ -2.36
PRPF39-208ENST00000554785 PRO1854Q9UHT4 67 aa0.32□□□□□ -2.36
PRPF39-208ENST00000554785 COX6CP09669 75 aa0.31□□□□□ -2.36
PRPF39-208ENST00000554785 CYP4F30PQ9H0H9 118 aa0.31□□□□□ -2.36
PRPF39-208ENST00000554785 TRAV22A0A0B4J277 110 aa0.31□□□□□ -2.36
PRPF39-208ENST00000554785 A0A1B0GX51 115 aa0.31□□□□□ -2.36
PRPF39-208ENST00000554785 CLLU1Q5K131 121 aa0.31□□□□□ -2.36
PRPF39-208ENST00000554785 LINC00208Q96KT6 92 aa0.31□□□□□ -2.36
PRPF39-208ENST00000554785 F8W1H4 67 aa0.3□□□□□ -2.36
PRPF39-208ENST00000554785 SPATA8Q6RVD6 105 aa0.3□□□□□ -2.36
PRPF39-208ENST00000554785 TSTD3H0UI37 97 aa0.29□□□□□ -2.36
PRPF39-208ENST00000554785 JMJD7-PLA2G4BH0Y9G9 81 aa0.29□□□□□ -2.36
PRPF39-208ENST00000554785 H0Y9P7 68 aa0.29□□□□□ -2.36
PRPF39-208ENST00000554785 MT1AP04731 61 aa0.29□□□□□ -2.36
PRPF39-208ENST00000554785 COX8AP10176 69 aa0.29□□□□□ -2.36
PRPF39-208ENST00000554785 COX7CP15954 63 aa0.29□□□□□ -2.36
PRPF39-208ENST00000554785 SPATA45Q537H7 98 aa0.29□□□□□ -2.36
PRPF39-208ENST00000554785 LOC101927531A0A1B0GV80 90 aa0.29□□□□□ -2.36
PRPF39-208ENST00000554785 ATXN8Q156A1 80 aa0.29□□□□□ -2.36
PRPF39-208ENST00000554785 VAMP8Q9BV40 100 aa0.28□□□□□ -2.36
PRPF39-208ENST00000554785 TNP1P09430 55 aa0.28□□□□□ -2.37
PRPF39-208ENST00000554785 SMIM20Q8N5G0 67 aa0.28□□□□□ -2.37
PRPF39-208ENST00000554785 UBL5Q9BZL1 73 aa0.28□□□□□ -2.37
PRPF39-208ENST00000554785 TP53AIP1Q9HCN2 124 aa0.28□□□□□ -2.37
PRPF39-208ENST00000554785 HIGD1BQ9P298 99 aa0.28□□□□□ -2.37
PRPF39-208ENST00000554785 CHKB-CPT1BH3BT56 60 aa0.27□□□□□ -2.37
PRPF39-208ENST00000554785 HSD52Q0P140 79 aa0.26□□□□□ -2.37
PRPF39-208ENST00000554785 DMAC1Q96GE9 116 aa0.26□□□□□ -2.37
PRPF39-208ENST00000554785 S100A1P23297 94 aa0.25□□□□□ -2.37
PRPF39-208ENST00000554785 ATOX1O00244 68 aa0.25□□□□□ -2.37
PRPF39-208ENST00000554785 DLEU1O43261 78 aa0.25□□□□□ -2.37
PRPF39-208ENST00000554785 ACYP2P14621 99 aa0.25□□□□□ -2.37
PRPF39-208ENST00000554785 MIR22HGQ0VDD5 57 aa0.25□□□□□ -2.37
PRPF39-208ENST00000554785 UQCRQO14949 82 aa0.23□□□□□ -2.37
PRPF39-208ENST00000554785 SCGB1A1P11684 91 aa0.23□□□□□ -2.37
PRPF39-208ENST00000554785 PYY3Q5JQD4 70 aa0.23□□□□□ -2.37
PRPF39-208ENST00000554785 SPTSSBQ8NFR3 76 aa0.23□□□□□ -2.37
PRPF39-208ENST00000554785 UQCR10Q9UDW1 63 aa0.23□□□□□ -2.37
PRPF39-208ENST00000554785 SERP2Q8N6R1 65 aa0.22□□□□□ -2.37
PRPF39-208ENST00000554785 SERP1Q9Y6X1 66 aa0.22□□□□□ -2.37
PRPF39-208ENST00000554785 ETDBQ3ZM63 59 aa0.22□□□□□ -2.37
PRPF39-208ENST00000554785 M0R143 59 aa0.21□□□□□ -2.38
PRPF39-208ENST00000554785 KRTAP21-1Q3LI58 79 aa0.2□□□□□ -2.38
PRPF39-208ENST00000554785 A0A1B0GU69 56 aa0.19□□□□□ -2.38
PRPF39-208ENST00000554785 H7BZZ5 65 aa0.18□□□□□ -2.38
PRPF39-208ENST00000554785 BRK1Q8WUW1 75 aa0.18□□□□□ -2.38
PRPF39-208ENST00000554785 ATP5EP2Q5VTU8 51 aa0.17□□□□□ -2.38
PRPF39-208ENST00000554785 RPS28P62857 69 aaKnown RBP0.17□□□□□ -2.38
PRPF39-208ENST00000554785 LINC00643Q86TS7 51 aa0.16□□□□□ -2.38
PRPF39-208ENST00000554785 PRR15LQ9BU68 103 aa0.16□□□□□ -2.38
PRPF39-208ENST00000554785 COL5A1-AS1Q5SY13 56 aa0.15□□□□□ -2.39
PRPF39-208ENST00000554785 GTF2H5Q6ZYL4 71 aa0.15□□□□□ -2.39
PRPF39-208ENST00000554785 UQCR11O14957 56 aa0.13□□□□□ -2.39
PRPF39-208ENST00000554785 SMIM6P0DI80 62 aa0.12□□□□□ -2.39
PRPF39-208ENST00000554785 A0A1B0GV90 55 aa0.1□□□□□ -2.39
PRPF39-208ENST00000554785 J3QR89 54 aa0.08□□□□□ -2.4
PRPF39-208ENST00000554785 LINC01558Q9Y6Z2 57 aa0.08□□□□□ -2.4
PRPF39-208ENST00000554785 PRM1P04553 51 aa0.08□□□□□ -2.4
PRPF39-208ENST00000554785 CCDC179H3BU77 68 aa0.07□□□□□ -2.4
PRPF39-208ENST00000554785 LOC105371267A0A1B0GV96 52 aa0.06□□□□□ -2.4
PRPF39-208ENST00000554785 K7ERU9 68 aa0.04□□□□□ -2.4
PRPF39-208ENST00000554785 ATP5EP56381 51 aaPredicted RBP0.01□□□□□ -2.41
Retrieved 78 of 20,778 RNA–protein pairs in 11.1 ms