RNA–Protein interactions for RNA: ENST00000554739.5

MTHFD1-208, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 3

Gene MTHFD1, Length 688 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-208ENST00000554739 KRTAP19-3Q7Z4W3 81 aa4.72□□□□□ -1.65
MTHFD1-208ENST00000554739 KRTAP2-2Q9BYT5 123 aa4.72□□□□□ -1.65
MTHFD1-208ENST00000554739 KRTAP2-1Q9BYU5 128 aa4.72□□□□□ -1.65
MTHFD1-208ENST00000554739 LCE3BQ5TA77 95 aa4.69□□□□□ -1.66
MTHFD1-208ENST00000554739 K7ERS5 55 aa4.68□□□□□ -1.66
MTHFD1-208ENST00000554739 DSTQ03001 7570 aaKnown RBP4.67□□□□□ -1.66
MTHFD1-208ENST00000554739 A6NED7 52 aa4.65□□□□□ -1.67
MTHFD1-208ENST00000554739 MT1GP13640 62 aa4.63□□□□□ -1.67
MTHFD1-208ENST00000554739 KRTAP25-1Q3LHN0 102 aa4.61□□□□□ -1.67
MTHFD1-208ENST00000554739 MT1LQ93083 61 aa4.61□□□□□ -1.67
MTHFD1-208ENST00000554739 PP632Q6XCG6 107 aa4.56□□□□□ -1.68
MTHFD1-208ENST00000554739 KRTAP12-3P60328 96 aa4.55□□□□□ -1.68
MTHFD1-208ENST00000554739 MT1MQ8N339 61 aa4.55□□□□□ -1.68
MTHFD1-208ENST00000554739 CDC42SE1Q9NRR8 79 aa4.48□□□□□ -1.69
MTHFD1-208ENST00000554739 KRTAP23-1A1A580 65 aa4.46□□□□□ -1.7
MTHFD1-208ENST00000554739 KRTAP4-3Q9BYR4 195 aa4.45□□□□□ -1.7
MTHFD1-208ENST00000554739 ROMO1P60602 79 aa4.42□□□□□ -1.7
MTHFD1-208ENST00000554739 KRTAP4-12Q9BQ66 201 aa4.42□□□□□ -1.7
MTHFD1-208ENST00000554739 KRTAP4-7Q9BYR0 210 aa4.4□□□□□ -1.71
MTHFD1-208ENST00000554739 KRTAP19-4Q3LI73 84 aa4.34□□□□□ -1.71
MTHFD1-208ENST00000554739 KRTAP4-9Q9BYQ8 210 aa4.34□□□□□ -1.71
MTHFD1-208ENST00000554739 KRTAP9-9Q9BYP9 154 aa4.32□□□□□ -1.72
MTHFD1-208ENST00000554739 KRTAP9-4Q9BYQ2 154 aa4.32□□□□□ -1.72
MTHFD1-208ENST00000554739 KRTAP15-1Q3LI76 137 aa4.31□□□□□ -1.72
MTHFD1-208ENST00000554739 LCE4AQ5TA78 99 aa4.29□□□□□ -1.72
MTHFD1-208ENST00000554739 HMCN1Q96RW7 5635 aa4.28□□□□□ -1.72
MTHFD1-208ENST00000554739 KRTAP5-4Q6L8H1 288 aa4.26□□□□□ -1.73
MTHFD1-208ENST00000554739 LCE1DQ5T752 114 aa4.25□□□□□ -1.73
MTHFD1-208ENST00000554739 GPR98Q8WXG9 6306 aa4.24□□□□□ -1.73
MTHFD1-208ENST00000554739 MT4P47944 62 aa4.22□□□□□ -1.73
MTHFD1-208ENST00000554739 LCE3CQ5T5A8 94 aa4.22□□□□□ -1.73
MTHFD1-208ENST00000554739 KRTAP5-5Q701N2 237 aaPredicted RBP4.18□□□□□ -1.74
MTHFD1-208ENST00000554739 BRK1Q8WUW1 75 aa4.15□□□□□ -1.75
MTHFD1-208ENST00000554739 SYNE1Q8NF91 8797 aaKnown RBP4.09□□□□□ -1.76
MTHFD1-208ENST00000554739 AHNAK2Q8IVF2 5795 aa4.05□□□□□ -1.76
MTHFD1-208ENST00000554739 SPRR5A0A1B0GTR4 108 aa4□□□□□ -1.77
MTHFD1-208ENST00000554739 KRTAP12-4P60329 112 aa4□□□□□ -1.77
MTHFD1-208ENST00000554739 KRTAP9-6A8MVA2 160 aa3.99□□□□□ -1.77
MTHFD1-208ENST00000554739 KRTAP20-2Q3LI61 65 aa3.99□□□□□ -1.77
MTHFD1-208ENST00000554739 KRTAP4-2Q9BYR5 136 aa3.96□□□□□ -1.78
MTHFD1-208ENST00000554739 A0A0A0MQY5 61 aa3.94□□□□□ -1.78
MTHFD1-208ENST00000554739 PMAIP1Q13794 54 aa3.93□□□□□ -1.78
MTHFD1-208ENST00000554739 MT1AP04731 61 aa3.92□□□□□ -1.78
MTHFD1-208ENST00000554739 KRTAP6-1Q3LI64 71 aa3.89□□□□□ -1.79
MTHFD1-208ENST00000554739 KRTAP5-3Q6L8H2 238 aa3.89□□□□□ -1.79
MTHFD1-208ENST00000554739 KRTAP5-10Q6L8G5 202 aa3.87□□□□□ -1.79
MTHFD1-208ENST00000554739 KRTAP4-11Q9BYQ6 195 aa3.87□□□□□ -1.79
MTHFD1-208ENST00000554739 PRO0628Q9UI54 55 aa3.81□□□□□ -1.8
MTHFD1-208ENST00000554739 KRTAP5-2Q701N4 177 aa3.76□□□□□ -1.81
MTHFD1-208ENST00000554739 PRAC1Q96KF2 57 aa3.75□□□□□ -1.81
MTHFD1-208ENST00000554739 KRTAP6-2Q3LI66 62 aa3.69□□□□□ -1.82
MTHFD1-208ENST00000554739 KRTAP5-7Q6L8G8 165 aa3.69□□□□□ -1.82
MTHFD1-208ENST00000554739 KTN1-AS1Q86SY8 53 aa3.6□□□□□ -1.83
MTHFD1-208ENST00000554739 OBSCNQ5VST9 7968 aa3.6□□□□□ -1.83
MTHFD1-208ENST00000554739 MT3P25713 68 aa3.58□□□□□ -1.84
MTHFD1-208ENST00000554739 KRTAP5-8O75690 187 aa3.5□□□□□ -1.85
MTHFD1-208ENST00000554739 MUC5ACP98088 5654 aa3.4□□□□□ -1.86
MTHFD1-208ENST00000554739 AHNAKQ09666 5890 aaKnown RBP3.36□□□□□ -1.87
MTHFD1-208ENST00000554739 MUC5BQ9HC84 5762 aaPredicted RBP3.35□□□□□ -1.87
MTHFD1-208ENST00000554739 KRTAP5-1Q6L8H4 278 aa3.34□□□□□ -1.87
MTHFD1-208ENST00000554739 LCE1EQ5T753 118 aa3.26□□□□□ -1.89
MTHFD1-208ENST00000554739 LUZP6Q538Z0 58 aa3.14□□□□□ -1.91
MTHFD1-208ENST00000554739 LCE3DQ9BYE3 92 aa3.07□□□□□ -1.92
MTHFD1-208ENST00000554739 NDUFAF8A1L188 74 aa3.04□□□□□ -1.92
MTHFD1-208ENST00000554739 LCE1BQ5T7P3 118 aa3.04□□□□□ -1.92
MTHFD1-208ENST00000554739 LCE1CQ5T751 118 aa3.03□□□□□ -1.92
MTHFD1-208ENST00000554739 LCE3EQ5T5B0 92 aa2.91□□□□□ -1.94
MTHFD1-208ENST00000554739 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.78□□□□□ -1.96
MTHFD1-208ENST00000554739 KRTAP5-11Q6L8G4 156 aa2.71□□□□□ -1.98
MTHFD1-208ENST00000554739 LCE1FQ5T754 118 aa2.64□□□□□ -1.99
MTHFD1-208ENST00000554739 KRTAP21-2Q3LI59 83 aa2.58□□□□□ -2
MTHFD1-208ENST00000554739 PHGR1C9JFL3 82 aa2.35□□□□□ -2.03
MTHFD1-208ENST00000554739 KRTAP4-4Q9BYR3 166 aa2.32□□□□□ -2.04
MTHFD1-208ENST00000554739 PRM1P04553 51 aa2.26□□□□□ -2.05
MTHFD1-208ENST00000554739 INE1O15225 51 aa2.23□□□□□ -2.05
MTHFD1-208ENST00000554739 MUC19Q7Z5P9 8384 aa2.22□□□□□ -2.05
MTHFD1-208ENST00000554739 KRTAP21-1Q3LI58 79 aa1.69□□□□□ -2.14
MTHFD1-208ENST00000554739 MUC16Q8WXI7 14507 aa1.5□□□□□ -2.17
Retrieved 78 of 20,778 RNA–protein pairs in 9.7 ms