RNA–Protein interactions for RNA: ENST00000554615.1

SEC23A-207, Transcript of Sec23 homolog A, coat complex II component, humanhuman

TSL 1 (best)

Gene SEC23A, Length 3,813 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23A-207ENST00000554615 KRTAP10-7P60409 375 aaPredicted RBP1.4□□□□□ -2.19
SEC23A-207ENST00000554615 LCE1EQ5T753 118 aa1.38□□□□□ -2.19
SEC23A-207ENST00000554615 AHNAKQ09666 5890 aaKnown RBP1.37□□□□□ -2.19
SEC23A-207ENST00000554615 PLAC4Q8WY50 150 aa1.36□□□□□ -2.19
SEC23A-207ENST00000554615 KRTAP2-3P0C7H8 128 aa1.36□□□□□ -2.19
SEC23A-207ENST00000554615 KRTAP2-4Q9BYR9 128 aa1.36□□□□□ -2.19
SEC23A-207ENST00000554615 KRTAP2-1Q9BYU5 128 aa1.36□□□□□ -2.19
SEC23A-207ENST00000554615 H3BS24 57 aa1.35□□□□□ -2.19
SEC23A-207ENST00000554615 KRTAP19-5Q3LI72 72 aa1.34□□□□□ -2.19
SEC23A-207ENST00000554615 TNP1P09430 55 aa1.34□□□□□ -2.19
SEC23A-207ENST00000554615 LCE1AQ5T7P2 110 aa1.34□□□□□ -2.19
SEC23A-207ENST00000554615 R4GN34 69 aa1.34□□□□□ -2.2
SEC23A-207ENST00000554615 LCE3AQ5TA76 89 aa1.32□□□□□ -2.2
SEC23A-207ENST00000554615 MT1EP04732 61 aa1.31□□□□□ -2.2
SEC23A-207ENST00000554615 KRTAP6-3Q3LI67 103 aa1.31□□□□□ -2.2
SEC23A-207ENST00000554615 KRTAP19-6Q3LI70 58 aa1.31□□□□□ -2.2
SEC23A-207ENST00000554615 KRTAP19-7Q3SYF9 63 aa1.31□□□□□ -2.2
SEC23A-207ENST00000554615 A0A0D9SG42 100 aa1.3□□□□□ -2.2
SEC23A-207ENST00000554615 MUC2Q02817 5179 aa1.3□□□□□ -2.2
SEC23A-207ENST00000554615 KRTAP10-10P60014 251 aa1.29□□□□□ -2.2
SEC23A-207ENST00000554615 INE1O15225 51 aa1.28□□□□□ -2.2
SEC23A-207ENST00000554615 LCE3CQ5T5A8 94 aa1.27□□□□□ -2.21
SEC23A-207ENST00000554615 SPINT4Q6UDR6 99 aa1.27□□□□□ -2.21
SEC23A-207ENST00000554615 KRTAP4-3Q9BYR4 195 aa1.26□□□□□ -2.21
SEC23A-207ENST00000554615 KRTAP9-6A8MVA2 160 aa1.25□□□□□ -2.21
SEC23A-207ENST00000554615 KRTAP20-1Q3LI63 56 aa1.25□□□□□ -2.21
SEC23A-207ENST00000554615 NDUFAF8A1L188 74 aa1.25□□□□□ -2.21
SEC23A-207ENST00000554615 KRTAP12-3P60328 96 aa1.24□□□□□ -2.21
SEC23A-207ENST00000554615 MT1LQ93083 61 aa1.24□□□□□ -2.21
SEC23A-207ENST00000554615 NEBP20929 6669 aa1.23□□□□□ -2.21
SEC23A-207ENST00000554615 KRTAP5-5Q701N2 237 aaPredicted RBP1.23□□□□□ -2.21
SEC23A-207ENST00000554615 KRTAP5-7Q6L8G8 165 aa1.23□□□□□ -2.21
SEC23A-207ENST00000554615 AHNAK2Q8IVF2 5795 aa1.22□□□□□ -2.21
SEC23A-207ENST00000554615 PRO2289Q9P1D8 64 aa1.22□□□□□ -2.21
SEC23A-207ENST00000554615 MT1AP04731 61 aa1.19□□□□□ -2.22
SEC23A-207ENST00000554615 KMT2DO14686 5537 aa1.17□□□□□ -2.22
SEC23A-207ENST00000554615 CAMK2N1Q7Z7J9 78 aa1.16□□□□□ -2.22
SEC23A-207ENST00000554615 KRTAP2-2Q9BYT5 123 aa1.16□□□□□ -2.22
SEC23A-207ENST00000554615 MT1MQ8N339 61 aa1.14□□□□□ -2.23
SEC23A-207ENST00000554615 MT1GP13640 62 aa1.13□□□□□ -2.23
SEC23A-207ENST00000554615 KRTAP19-3Q7Z4W3 81 aa1.12□□□□□ -2.23
SEC23A-207ENST00000554615 A0A0A0MQY5 61 aa1.12□□□□□ -2.23
SEC23A-207ENST00000554615 DMBT1Q9UGM3 2413 aaPredicted RBP1.11□□□□□ -2.23
SEC23A-207ENST00000554615 LUZP6Q538Z0 58 aa1.1□□□□□ -2.23
SEC23A-207ENST00000554615 MUC12Q9UKN1 5478 aa1.09□□□□□ -2.24
SEC23A-207ENST00000554615 OBSCNQ5VST9 7968 aa1.08□□□□□ -2.24
SEC23A-207ENST00000554615 MUC5ACP98088 5654 aa1.07□□□□□ -2.24
SEC23A-207ENST00000554615 KRTAP5-10Q6L8G5 202 aa1.06□□□□□ -2.24
SEC23A-207ENST00000554615 FCGBPQ9Y6R7 5405 aaPredicted RBP1.02□□□□□ -2.25
SEC23A-207ENST00000554615 MDN1Q9NU22 5596 aa1.01□□□□□ -2.25
SEC23A-207ENST00000554615 SPRR2FQ96RM1 72 aa0.99□□□□□ -2.25
SEC23A-207ENST00000554615 KRTAP6-1Q3LI64 71 aa0.99□□□□□ -2.25
SEC23A-207ENST00000554615 M0R2T5 61 aa0.98□□□□□ -2.25
SEC23A-207ENST00000554615 MT3P25713 68 aa0.98□□□□□ -2.25
SEC23A-207ENST00000554615 SYNE2Q8WXH0 6885 aaKnown RBP0.96□□□□□ -2.26
SEC23A-207ENST00000554615 SPRR2AP35326 72 aa0.93□□□□□ -2.26
SEC23A-207ENST00000554615 FSIP2Q5CZC0 6907 aa0.92□□□□□ -2.26
SEC23A-207ENST00000554615 LCE3EQ5T5B0 92 aa0.88□□□□□ -2.27
SEC23A-207ENST00000554615 SPRR2BP35325 72 aa0.88□□□□□ -2.27
SEC23A-207ENST00000554615 KRTAP12-4P60329 112 aa0.88□□□□□ -2.27
SEC23A-207ENST00000554615 SPRR2EP22531 72 aa0.87□□□□□ -2.27
SEC23A-207ENST00000554615 LCE3DQ9BYE3 92 aa0.86□□□□□ -2.27
SEC23A-207ENST00000554615 MACF1Q9UPN3 7388 aaKnown RBP0.86□□□□□ -2.27
SEC23A-207ENST00000554615 SPRR2DP22532 72 aa0.85□□□□□ -2.27
SEC23A-207ENST00000554615 KRTAP20-2Q3LI61 65 aa0.85□□□□□ -2.27
SEC23A-207ENST00000554615 LCE1CQ5T751 118 aa0.84□□□□□ -2.27
SEC23A-207ENST00000554615 LCE1BQ5T7P3 118 aa0.84□□□□□ -2.27
SEC23A-207ENST00000554615 KRTAP6-2Q3LI66 62 aa0.84□□□□□ -2.27
SEC23A-207ENST00000554615 LCE1FQ5T754 118 aa0.8□□□□□ -2.28
SEC23A-207ENST00000554615 PRM1P04553 51 aa0.79□□□□□ -2.28
SEC23A-207ENST00000554615 KRTAP21-2Q3LI59 83 aa0.76□□□□□ -2.29
SEC23A-207ENST00000554615 KRTAP21-1Q3LI58 79 aa0.73□□□□□ -2.29
SEC23A-207ENST00000554615 MUC16Q8WXI7 14507 aa0.67□□□□□ -2.3
SEC23A-207ENST00000554615 SYNE1Q8NF91 8797 aaKnown RBP0.66□□□□□ -2.3
SEC23A-207ENST00000554615 PHGR1C9JFL3 82 aa0.61□□□□□ -2.31
SEC23A-207ENST00000554615 MT4P47944 62 aa0.6□□□□□ -2.31
SEC23A-207ENST00000554615 MUC19Q7Z5P9 8384 aa0.57□□□□□ -2.32
SEC23A-207ENST00000554615 DSTQ03001 7570 aaKnown RBP0.49□□□□□ -2.33
Retrieved 78 of 20,778 RNA–protein pairs in 12.6 ms