RNA–Protein interactions for RNA: ENST00000554607.1

FOXA1-204, Transcript of forkhead box A1, humanhuman

TSL 3

Gene FOXA1, Length 789 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA1-204ENST00000554607 KRTAP5-7Q6L8G8 165 aa8.38□□□□□ -1.07
FOXA1-204ENST00000554607 KRTAP12-1P59990 96 aa8.35□□□□□ -1.07
FOXA1-204ENST00000554607 H3BS24 57 aa8.33□□□□□ -1.08
FOXA1-204ENST00000554607 TMEM258P61165 79 aa8.33□□□□□ -1.08
FOXA1-204ENST00000554607 A0A1B0GU33 70 aa8.32□□□□□ -1.08
FOXA1-204ENST00000554607 KRTAP5-3Q6L8H2 238 aa8.3□□□□□ -1.08
FOXA1-204ENST00000554607 C10orf95Q9H7T3 257 aa8.3□□□□□ -1.08
FOXA1-204ENST00000554607 H7BZZ5 65 aa8.29□□□□□ -1.08
FOXA1-204ENST00000554607 COA5Q86WW8 74 aa8.29□□□□□ -1.08
FOXA1-204ENST00000554607 LCE3AQ5TA76 89 aa8.25□□□□□ -1.09
FOXA1-204ENST00000554607 ATP5EP56381 51 aaPredicted RBP8.22□□□□□ -1.09
FOXA1-204ENST00000554607 TNP1P09430 55 aa8.17□□□□□ -1.1
FOXA1-204ENST00000554607 RPS28P62857 69 aaKnown RBP8.14□□□□□ -1.11
FOXA1-204ENST00000554607 KRTAP20-2Q3LI61 65 aa8.13□□□□□ -1.11
FOXA1-204ENST00000554607 SMIM26A0A096LP01 95 aa8.11□□□□□ -1.11
FOXA1-204ENST00000554607 KRTAP4-7Q9BYR0 210 aa8.07□□□□□ -1.12
FOXA1-204ENST00000554607 SPRR5A0A1B0GTR4 108 aa8.06□□□□□ -1.12
FOXA1-204ENST00000554607 KRTAP19-4Q3LI73 84 aa8.04□□□□□ -1.12
FOXA1-204ENST00000554607 A8MU10 97 aa7.97□□□□□ -1.13
FOXA1-204ENST00000554607 KRTAP12-4P60329 112 aa7.97□□□□□ -1.13
FOXA1-204ENST00000554607 KRTAP5-5Q701N2 237 aaPredicted RBP7.97□□□□□ -1.13
FOXA1-204ENST00000554607 KRTAP12-3P60328 96 aa7.96□□□□□ -1.14
FOXA1-204ENST00000554607 A0A1B0GU69 56 aa7.92□□□□□ -1.14
FOXA1-204ENST00000554607 SYNE1Q8NF91 8797 aaKnown RBP7.8□□□□□ -1.16
FOXA1-204ENST00000554607 V9GYY9 64 aa7.71□□□□□ -1.18
FOXA1-204ENST00000554607 Q1T7F1 81 aa7.7□□□□□ -1.18
FOXA1-204ENST00000554607 KRTAP4-2Q9BYR5 136 aa7.58□□□□□ -1.2
FOXA1-204ENST00000554607 LINC01558Q9Y6Z2 57 aa7.58□□□□□ -1.2
FOXA1-204ENST00000554607 KRTAP4-11Q9BYQ6 195 aa7.57□□□□□ -1.2
FOXA1-204ENST00000554607 PRR15LQ9BU68 103 aa7.54□□□□□ -1.2
FOXA1-204ENST00000554607 PSPHP1O15172 72 aa7.48□□□□□ -1.21
FOXA1-204ENST00000554607 KRTAP25-1Q3LHN0 102 aa7.43□□□□□ -1.22
FOXA1-204ENST00000554607 KRTAP5-2Q701N4 177 aa7.41□□□□□ -1.22
FOXA1-204ENST00000554607 AHNAKQ09666 5890 aaKnown RBP7.35□□□□□ -1.23
FOXA1-204ENST00000554607 KRTAP5-8O75690 187 aa7.3□□□□□ -1.24
FOXA1-204ENST00000554607 A6NED7 52 aa7.29□□□□□ -1.24
FOXA1-204ENST00000554607 MUC5ACP98088 5654 aa7.29□□□□□ -1.24
FOXA1-204ENST00000554607 MUC5BQ9HC84 5762 aaPredicted RBP7.29□□□□□ -1.24
FOXA1-204ENST00000554607 MT1AP04731 61 aa7.28□□□□□ -1.24
FOXA1-204ENST00000554607 LCE3CQ5T5A8 94 aa7.28□□□□□ -1.24
FOXA1-204ENST00000554607 BRK1Q8WUW1 75 aa7.27□□□□□ -1.25
FOXA1-204ENST00000554607 UQCR11O14957 56 aa7.26□□□□□ -1.25
FOXA1-204ENST00000554607 KRTAP15-1Q3LI76 137 aa7.26□□□□□ -1.25
FOXA1-204ENST00000554607 KRTAP6-1Q3LI64 71 aa7.25□□□□□ -1.25
FOXA1-204ENST00000554607 PRO0628Q9UI54 55 aa7.23□□□□□ -1.25
FOXA1-204ENST00000554607 CDC42SE1Q9NRR8 79 aa7.21□□□□□ -1.26
FOXA1-204ENST00000554607 KRTAP23-1A1A580 65 aa7.15□□□□□ -1.26
FOXA1-204ENST00000554607 MIR22HGQ0VDD5 57 aa7.13□□□□□ -1.27
FOXA1-204ENST00000554607 OBSCNQ5VST9 7968 aa7.11□□□□□ -1.27
FOXA1-204ENST00000554607 K7ERS5 55 aa7.07□□□□□ -1.28
FOXA1-204ENST00000554607 KRTAP6-2Q3LI66 62 aa7.04□□□□□ -1.28
FOXA1-204ENST00000554607 PMAIP1Q13794 54 aa6.9□□□□□ -1.3
FOXA1-204ENST00000554607 SVIPQ8NHG7 77 aa6.88□□□□□ -1.31
FOXA1-204ENST00000554607 KRTAP9-6A8MVA2 160 aa6.82□□□□□ -1.32
FOXA1-204ENST00000554607 KRTAP5-1Q6L8H4 278 aa6.74□□□□□ -1.33
FOXA1-204ENST00000554607 MT3P25713 68 aa6.72□□□□□ -1.33
FOXA1-204ENST00000554607 KTN1-AS1Q86SY8 53 aa6.67□□□□□ -1.34
FOXA1-204ENST00000554607 ROMO1P60602 79 aa6.54□□□□□ -1.36
FOXA1-204ENST00000554607 PRAC1Q96KF2 57 aa6.4□□□□□ -1.38
FOXA1-204ENST00000554607 LCE1EQ5T753 118 aa6.3□□□□□ -1.4
FOXA1-204ENST00000554607 LCE1BQ5T7P3 118 aa5.95□□□□□ -1.46
FOXA1-204ENST00000554607 LCE1CQ5T751 118 aa5.84□□□□□ -1.47
FOXA1-204ENST00000554607 LCE1FQ5T754 118 aa5.35□□□□□ -1.55
FOXA1-204ENST00000554607 KRTAP5-11Q6L8G4 156 aa5.34□□□□□ -1.55
FOXA1-204ENST00000554607 LUZP6Q538Z0 58 aa5.27□□□□□ -1.57
FOXA1-204ENST00000554607 KRTAP5-6Q6L8G9 129 aaPredicted RBP5.24□□□□□ -1.57
FOXA1-204ENST00000554607 NDUFAF8A1L188 74 aa5.17□□□□□ -1.58
FOXA1-204ENST00000554607 LCE3DQ9BYE3 92 aa5.15□□□□□ -1.59
FOXA1-204ENST00000554607 PHGR1C9JFL3 82 aa5.05□□□□□ -1.6
FOXA1-204ENST00000554607 KRTAP21-2Q3LI59 83 aa4.78□□□□□ -1.64
FOXA1-204ENST00000554607 LCE3EQ5T5B0 92 aa4.75□□□□□ -1.65
FOXA1-204ENST00000554607 A0A0A0MQY5 61 aa4.74□□□□□ -1.65
FOXA1-204ENST00000554607 KRTAP4-4Q9BYR3 166 aa4.45□□□□□ -1.7
FOXA1-204ENST00000554607 MUC19Q7Z5P9 8384 aa4.41□□□□□ -1.7
FOXA1-204ENST00000554607 INE1O15225 51 aa4.35□□□□□ -1.71
FOXA1-204ENST00000554607 KRTAP21-1Q3LI58 79 aa3.87□□□□□ -1.79
FOXA1-204ENST00000554607 PRM1P04553 51 aa3.38□□□□□ -1.87
FOXA1-204ENST00000554607 MUC16Q8WXI7 14507 aa3.12□□□□□ -1.91
Retrieved 78 of 20,778 RNA–protein pairs in 28.8 ms