RNA–Protein interactions for RNA: ENST00000554350.5

ATXN3-226, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 943 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-226ENST00000554350 SPRR2BP35325 72 aa2.78□□□□□ -1.96
ATXN3-226ENST00000554350 SPRR2AP35326 72 aa2.78□□□□□ -1.96
ATXN3-226ENST00000554350 LCA10Q71F78 164 aa2.78□□□□□ -1.96
ATXN3-226ENST00000554350 A0A1B0GU69 56 aa2.76□□□□□ -1.97
ATXN3-226ENST00000554350 A6NN06 94 aa2.76□□□□□ -1.97
ATXN3-226ENST00000554350 PMAIP1Q13794 54 aa2.75□□□□□ -1.97
ATXN3-226ENST00000554350 SPATA8Q6RVD6 105 aa2.75□□□□□ -1.97
ATXN3-226ENST00000554350 UQCR11O14957 56 aa2.74□□□□□ -1.97
ATXN3-226ENST00000554350 SPINK7P58062 85 aa2.73□□□□□ -1.97
ATXN3-226ENST00000554350 SEC61GP60059 68 aa2.72□□□□□ -1.97
ATXN3-226ENST00000554350 SPRR2DP22532 72 aa2.7□□□□□ -1.98
ATXN3-226ENST00000554350 MIR22HGQ0VDD5 57 aa2.7□□□□□ -1.98
ATXN3-226ENST00000554350 KTN1-AS1Q86SY8 53 aa2.7□□□□□ -1.98
ATXN3-226ENST00000554350 SPRR2FQ96RM1 72 aa2.7□□□□□ -1.98
ATXN3-226ENST00000554350 RBM12B-AS1Q9P1G2 102 aa2.66□□□□□ -1.98
ATXN3-226ENST00000554350 A0A1B0GU33 70 aa2.63□□□□□ -1.99
ATXN3-226ENST00000554350 LCE3DQ9BYE3 92 aa2.63□□□□□ -1.99
ATXN3-226ENST00000554350 KRTAP5-8O75690 187 aa2.62□□□□□ -1.99
ATXN3-226ENST00000554350 H1FX-AS1Q4G0G2 97 aa2.62□□□□□ -1.99
ATXN3-226ENST00000554350 H0YAA0 97 aa2.59□□□□□ -1.99
ATXN3-226ENST00000554350 K7ERS5 55 aa2.58□□□□□ -2
ATXN3-226ENST00000554350 S4R3F8 94 aa2.58□□□□□ -2
ATXN3-226ENST00000554350 SPRR5A0A1B0GTR4 108 aa2.57□□□□□ -2
ATXN3-226ENST00000554350 DSTQ03001 7570 aaKnown RBP2.55□□□□□ -2
ATXN3-226ENST00000554350 CSAG1Q6PB30 78 aa2.54□□□□□ -2
ATXN3-226ENST00000554350 MT1BP07438 61 aa2.53□□□□□ -2
ATXN3-226ENST00000554350 PP632Q6XCG6 107 aa2.53□□□□□ -2
ATXN3-226ENST00000554350 KRTAP8-1Q8IUC2 63 aa2.53□□□□□ -2
ATXN3-226ENST00000554350 M0QZ58 72 aa2.52□□□□□ -2.01
ATXN3-226ENST00000554350 LINC01554Q52M75 96 aa2.49□□□□□ -2.01
ATXN3-226ENST00000554350 AHNAK2Q8IVF2 5795 aa2.49□□□□□ -2.01
ATXN3-226ENST00000554350 ROMO1P60602 79 aa2.48□□□□□ -2.01
ATXN3-226ENST00000554350 KRTAP5-10Q6L8G5 202 aa2.48□□□□□ -2.01
ATXN3-226ENST00000554350 ADM2Q7Z4H4 148 aa2.48□□□□□ -2.01
ATXN3-226ENST00000554350 P0C880 135 aa2.47□□□□□ -2.01
ATXN3-226ENST00000554350 KRTAP25-1Q3LHN0 102 aa2.47□□□□□ -2.01
ATXN3-226ENST00000554350 KRTAP13-4Q3LI77 160 aa2.47□□□□□ -2.01
ATXN3-226ENST00000554350 KRTAP5-7Q6L8G8 165 aa2.46□□□□□ -2.02
ATXN3-226ENST00000554350 HMCN1Q96RW7 5635 aa2.45□□□□□ -2.02
ATXN3-226ENST00000554350 KRTAP19-8Q3LI54 63 aa2.44□□□□□ -2.02
ATXN3-226ENST00000554350 KRTAP12-1P59990 96 aa2.43□□□□□ -2.02
ATXN3-226ENST00000554350 A0A0D9SG42 100 aa2.41□□□□□ -2.02
ATXN3-226ENST00000554350 MT4P47944 62 aa2.41□□□□□ -2.02
ATXN3-226ENST00000554350 CRIPTQ9P021 101 aa2.39□□□□□ -2.03
ATXN3-226ENST00000554350 R4GN34 69 aa2.39□□□□□ -2.03
ATXN3-226ENST00000554350 MUC19Q7Z5P9 8384 aa2.38□□□□□ -2.03
ATXN3-226ENST00000554350 SPINT4Q6UDR6 99 aa2.37□□□□□ -2.03
ATXN3-226ENST00000554350 SPRR2GQ9BYE4 73 aa2.37□□□□□ -2.03
ATXN3-226ENST00000554350 PRO2289Q9P1D8 64 aa2.35□□□□□ -2.03
ATXN3-226ENST00000554350 C10orf95Q9H7T3 257 aa2.28□□□□□ -2.04
ATXN3-226ENST00000554350 MT1XP80297 61 aa2.26□□□□□ -2.05
ATXN3-226ENST00000554350 CAMK2N1Q7Z7J9 78 aa2.25□□□□□ -2.05
ATXN3-226ENST00000554350 AHNAKQ09666 5890 aaKnown RBP2.21□□□□□ -2.06
ATXN3-226ENST00000554350 TNP1P09430 55 aa2.21□□□□□ -2.06
ATXN3-226ENST00000554350 PLAC4Q8WY50 150 aa2.2□□□□□ -2.06
ATXN3-226ENST00000554350 MUC5ACP98088 5654 aa2.14□□□□□ -2.07
ATXN3-226ENST00000554350 KRTAP19-3Q7Z4W3 81 aa2.13□□□□□ -2.07
ATXN3-226ENST00000554350 MUC5BQ9HC84 5762 aaPredicted RBP2.12□□□□□ -2.07
ATXN3-226ENST00000554350 KRTAP21-2Q3LI59 83 aa2.1□□□□□ -2.07
ATXN3-226ENST00000554350 KRTAP20-2Q3LI61 65 aa2.08□□□□□ -2.08
ATXN3-226ENST00000554350 LUZP6Q538Z0 58 aa2.08□□□□□ -2.08
ATXN3-226ENST00000554350 MT1EP04732 61 aa2.04□□□□□ -2.08
ATXN3-226ENST00000554350 MT1GP13640 62 aa2.01□□□□□ -2.09
ATXN3-226ENST00000554350 KRTAP19-7Q3SYF9 63 aa2.01□□□□□ -2.09
ATXN3-226ENST00000554350 MT1MQ8N339 61 aa1.98□□□□□ -2.09
ATXN3-226ENST00000554350 KRTAP12-3P60328 96 aa1.97□□□□□ -2.09
ATXN3-226ENST00000554350 KRTAP12-4P60329 112 aa1.97□□□□□ -2.09
ATXN3-226ENST00000554350 KRTAP19-5Q3LI72 72 aa1.89□□□□□ -2.11
ATXN3-226ENST00000554350 MT1LQ93083 61 aa1.87□□□□□ -2.11
ATXN3-226ENST00000554350 SYNE1Q8NF91 8797 aaKnown RBP1.83□□□□□ -2.12
ATXN3-226ENST00000554350 INE1O15225 51 aa1.82□□□□□ -2.12
ATXN3-226ENST00000554350 KRTAP6-2Q3LI66 62 aa1.65□□□□□ -2.15
ATXN3-226ENST00000554350 KRTAP6-1Q3LI64 71 aa1.62□□□□□ -2.15
ATXN3-226ENST00000554350 MT1AP04731 61 aa1.58□□□□□ -2.16
ATXN3-226ENST00000554350 PHGR1C9JFL3 82 aa1.52□□□□□ -2.17
ATXN3-226ENST00000554350 PRM1P04553 51 aa1.27□□□□□ -2.21
ATXN3-226ENST00000554350 KRTAP21-1Q3LI58 79 aa1.15□□□□□ -2.23
ATXN3-226ENST00000554350 MUC16Q8WXI7 14507 aa0.98□□□□□ -2.25
Retrieved 78 of 20,778 RNA–protein pairs in 207.6 ms