RNA–Protein interactions for RNA: ENST00000554170.1

XRCC3-206, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 4

Gene XRCC3, Length 572 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-206ENST00000554170 A6NED7 52 aa4.81□□□□□ -1.64
XRCC3-206ENST00000554170 KRTAP19-7Q3SYF9 63 aa4.77□□□□□ -1.65
XRCC3-206ENST00000554170 LCE5AQ5TCM9 118 aa4.76□□□□□ -1.65
XRCC3-206ENST00000554170 MT1EP04732 61 aa4.74□□□□□ -1.65
XRCC3-206ENST00000554170 KRTAP19-5Q3LI72 72 aa4.73□□□□□ -1.65
XRCC3-206ENST00000554170 H3BS24 57 aa4.72□□□□□ -1.65
XRCC3-206ENST00000554170 LCE3AQ5TA76 89 aa4.72□□□□□ -1.65
XRCC3-206ENST00000554170 LCE1DQ5T752 114 aa4.71□□□□□ -1.66
XRCC3-206ENST00000554170 KRTAP19-3Q7Z4W3 81 aa4.69□□□□□ -1.66
XRCC3-206ENST00000554170 KRTAP25-1Q3LHN0 102 aa4.68□□□□□ -1.66
XRCC3-206ENST00000554170 CDC42SE1Q9NRR8 79 aa4.62□□□□□ -1.67
XRCC3-206ENST00000554170 MT1GP13640 62 aa4.6□□□□□ -1.67
XRCC3-206ENST00000554170 MT4P47944 62 aa4.6□□□□□ -1.67
XRCC3-206ENST00000554170 LCE4AQ5TA78 99 aa4.6□□□□□ -1.67
XRCC3-206ENST00000554170 PP632Q6XCG6 107 aa4.6□□□□□ -1.67
XRCC3-206ENST00000554170 HMCN1Q96RW7 5635 aa4.59□□□□□ -1.67
XRCC3-206ENST00000554170 KRTAP12-3P60328 96 aa4.56□□□□□ -1.68
XRCC3-206ENST00000554170 KRTAP5-10Q6L8G5 202 aa4.56□□□□□ -1.68
XRCC3-206ENST00000554170 MT1LQ93083 61 aa4.56□□□□□ -1.68
XRCC3-206ENST00000554170 KRTAP4-12Q9BQ66 201 aa4.55□□□□□ -1.68
XRCC3-206ENST00000554170 AHNAK2Q8IVF2 5795 aa4.53□□□□□ -1.68
XRCC3-206ENST00000554170 ROMO1P60602 79 aa4.53□□□□□ -1.68
XRCC3-206ENST00000554170 KRTAP23-1A1A580 65 aa4.52□□□□□ -1.69
XRCC3-206ENST00000554170 MT1MQ8N339 61 aa4.5□□□□□ -1.69
XRCC3-206ENST00000554170 SVIPQ8NHG7 77 aa4.49□□□□□ -1.69
XRCC3-206ENST00000554170 KRTAP5-4Q6L8H1 288 aa4.46□□□□□ -1.7
XRCC3-206ENST00000554170 KRTAP5-7Q6L8G8 165 aa4.43□□□□□ -1.7
XRCC3-206ENST00000554170 KRTAP5-3Q6L8H2 238 aa4.37□□□□□ -1.71
XRCC3-206ENST00000554170 KRTAP9-9Q9BYP9 154 aa4.37□□□□□ -1.71
XRCC3-206ENST00000554170 KRTAP9-4Q9BYQ2 154 aa4.37□□□□□ -1.71
XRCC3-206ENST00000554170 KRTAP4-3Q9BYR4 195 aa4.36□□□□□ -1.71
XRCC3-206ENST00000554170 KRTAP19-4Q3LI73 84 aa4.35□□□□□ -1.71
XRCC3-206ENST00000554170 BRK1Q8WUW1 75 aa4.35□□□□□ -1.71
XRCC3-206ENST00000554170 KRTAP15-1Q3LI76 137 aa4.34□□□□□ -1.71
XRCC3-206ENST00000554170 KRTAP4-7Q9BYR0 210 aa4.33□□□□□ -1.72
XRCC3-206ENST00000554170 SPRR5A0A1B0GTR4 108 aa4.23□□□□□ -1.73
XRCC3-206ENST00000554170 KRTAP20-2Q3LI61 65 aa4.23□□□□□ -1.73
XRCC3-206ENST00000554170 LCE3CQ5T5A8 94 aa4.22□□□□□ -1.73
XRCC3-206ENST00000554170 KRTAP5-5Q701N2 237 aaPredicted RBP4.13□□□□□ -1.75
XRCC3-206ENST00000554170 KRTAP12-4P60329 112 aa4.1□□□□□ -1.75
XRCC3-206ENST00000554170 PMAIP1Q13794 54 aa4.1□□□□□ -1.75
XRCC3-206ENST00000554170 SYNE1Q8NF91 8797 aaKnown RBP3.99□□□□□ -1.77
XRCC3-206ENST00000554170 KRTAP4-11Q9BYQ6 195 aa3.96□□□□□ -1.78
XRCC3-206ENST00000554170 PRO0628Q9UI54 55 aa3.94□□□□□ -1.78
XRCC3-206ENST00000554170 KRTAP9-6A8MVA2 160 aa3.91□□□□□ -1.78
XRCC3-206ENST00000554170 MT1AP04731 61 aa3.9□□□□□ -1.79
XRCC3-206ENST00000554170 KRTAP4-2Q9BYR5 136 aa3.9□□□□□ -1.79
XRCC3-206ENST00000554170 PRAC1Q96KF2 57 aa3.87□□□□□ -1.79
XRCC3-206ENST00000554170 KRTAP6-1Q3LI64 71 aa3.84□□□□□ -1.79
XRCC3-206ENST00000554170 KRTAP5-2Q701N4 177 aa3.84□□□□□ -1.79
XRCC3-206ENST00000554170 KRTAP5-8O75690 187 aa3.83□□□□□ -1.8
XRCC3-206ENST00000554170 AHNAKQ09666 5890 aaKnown RBP3.82□□□□□ -1.8
XRCC3-206ENST00000554170 MUC5ACP98088 5654 aa3.81□□□□□ -1.8
XRCC3-206ENST00000554170 MUC5BQ9HC84 5762 aaPredicted RBP3.79□□□□□ -1.8
XRCC3-206ENST00000554170 KTN1-AS1Q86SY8 53 aa3.73□□□□□ -1.81
XRCC3-206ENST00000554170 OBSCNQ5VST9 7968 aa3.69□□□□□ -1.82
XRCC3-206ENST00000554170 KRTAP6-2Q3LI66 62 aa3.64□□□□□ -1.83
XRCC3-206ENST00000554170 MT3P25713 68 aa3.59□□□□□ -1.83
XRCC3-206ENST00000554170 A0A0A0MQY5 61 aa3.52□□□□□ -1.85
XRCC3-206ENST00000554170 KRTAP5-1Q6L8H4 278 aa3.52□□□□□ -1.85
XRCC3-206ENST00000554170 LUZP6Q538Z0 58 aa3.32□□□□□ -1.88
XRCC3-206ENST00000554170 LCE1EQ5T753 118 aa3.23□□□□□ -1.89
XRCC3-206ENST00000554170 LCE3DQ9BYE3 92 aa3.1□□□□□ -1.91
XRCC3-206ENST00000554170 LCE1BQ5T7P3 118 aa3.06□□□□□ -1.92
XRCC3-206ENST00000554170 LCE1CQ5T751 118 aa3□□□□□ -1.93
XRCC3-206ENST00000554170 LCE3EQ5T5B0 92 aa2.95□□□□□ -1.94
XRCC3-206ENST00000554170 NDUFAF8A1L188 74 aa2.79□□□□□ -1.96
XRCC3-206ENST00000554170 KRTAP5-11Q6L8G4 156 aa2.79□□□□□ -1.96
XRCC3-206ENST00000554170 LCE1FQ5T754 118 aa2.76□□□□□ -1.97
XRCC3-206ENST00000554170 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.73□□□□□ -1.97
XRCC3-206ENST00000554170 PHGR1C9JFL3 82 aa2.67□□□□□ -1.98
XRCC3-206ENST00000554170 KRTAP21-2Q3LI59 83 aa2.52□□□□□ -2.01
XRCC3-206ENST00000554170 PRM1P04553 51 aa2.31□□□□□ -2.04
XRCC3-206ENST00000554170 INE1O15225 51 aa2.3□□□□□ -2.04
XRCC3-206ENST00000554170 KRTAP4-4Q9BYR3 166 aa2.3□□□□□ -2.04
XRCC3-206ENST00000554170 MUC19Q7Z5P9 8384 aa2.29□□□□□ -2.04
XRCC3-206ENST00000554170 KRTAP21-1Q3LI58 79 aa2.03□□□□□ -2.08
XRCC3-206ENST00000554170 MUC16Q8WXI7 14507 aa1.64□□□□□ -2.15
Retrieved 78 of 20,778 RNA–protein pairs in 12.3 ms