RNA–Protein interactions for RNA: ENST00000554131.5

PSEN1-210, Transcript of presenilin 1, humanhuman

TSL 3

Gene PSEN1, Length 591 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-210ENST00000554131 KRTAP12-3P60328 96 aa6.63□□□□□ -1.35
PSEN1-210ENST00000554131 MT1LQ93083 61 aa6.61□□□□□ -1.35
PSEN1-210ENST00000554131 SPRR2DP22532 72 aa6.58□□□□□ -1.36
PSEN1-210ENST00000554131 MT1GP13640 62 aa6.53□□□□□ -1.36
PSEN1-210ENST00000554131 KRTAP20-1Q3LI63 56 aa6.51□□□□□ -1.37
PSEN1-210ENST00000554131 PP632Q6XCG6 107 aa6.5□□□□□ -1.37
PSEN1-210ENST00000554131 KRTAP2-3P0C7H8 128 aa6.48□□□□□ -1.37
PSEN1-210ENST00000554131 KRTAP2-4Q9BYR9 128 aa6.48□□□□□ -1.37
PSEN1-210ENST00000554131 MT1MQ8N339 61 aa6.46□□□□□ -1.38
PSEN1-210ENST00000554131 PMAIP1Q13794 54 aa6.4□□□□□ -1.38
PSEN1-210ENST00000554131 LCE3BQ5TA77 95 aa6.39□□□□□ -1.39
PSEN1-210ENST00000554131 PRO0628Q9UI54 55 aa6.37□□□□□ -1.39
PSEN1-210ENST00000554131 KRTAP15-1Q3LI76 137 aa6.35□□□□□ -1.39
PSEN1-210ENST00000554131 KRTAP4-7Q9BYR0 210 aa6.32□□□□□ -1.4
PSEN1-210ENST00000554131 KRTAP4-3Q9BYR4 195 aa6.31□□□□□ -1.4
PSEN1-210ENST00000554131 KRTAP2-2Q9BYT5 123 aa6.31□□□□□ -1.4
PSEN1-210ENST00000554131 KRTAP2-1Q9BYU5 128 aa6.31□□□□□ -1.4
PSEN1-210ENST00000554131 GPR98Q8WXG9 6306 aa6.3□□□□□ -1.4
PSEN1-210ENST00000554131 KRTAP19-4Q3LI73 84 aa6.26□□□□□ -1.41
PSEN1-210ENST00000554131 DSTQ03001 7570 aaKnown RBP6.26□□□□□ -1.41
PSEN1-210ENST00000554131 LCE3CQ5T5A8 94 aa6.17□□□□□ -1.42
PSEN1-210ENST00000554131 PRAC1Q96KF2 57 aa6.12□□□□□ -1.43
PSEN1-210ENST00000554131 KTN1-AS1Q86SY8 53 aa5.98□□□□□ -1.45
PSEN1-210ENST00000554131 LOC100996750A0A140TA64 210 aa5.96□□□□□ -1.46
PSEN1-210ENST00000554131 KRTAP5-5Q701N2 237 aaPredicted RBP5.93□□□□□ -1.46
PSEN1-210ENST00000554131 KRTAP5-4Q6L8H1 288 aa5.92□□□□□ -1.46
PSEN1-210ENST00000554131 KRTAP9-6A8MVA2 160 aa5.89□□□□□ -1.47
PSEN1-210ENST00000554131 LCE4AQ5TA78 99 aa5.87□□□□□ -1.47
PSEN1-210ENST00000554131 KRTAP4-9Q9BYQ8 210 aa5.83□□□□□ -1.48
PSEN1-210ENST00000554131 LCE1DQ5T752 114 aa5.76□□□□□ -1.49
PSEN1-210ENST00000554131 MT4P47944 62 aa5.72□□□□□ -1.49
PSEN1-210ENST00000554131 HMCN1Q96RW7 5635 aa5.67□□□□□ -1.5
PSEN1-210ENST00000554131 KRTAP4-6Q9BYQ5 205 aa5.67□□□□□ -1.5
PSEN1-210ENST00000554131 SPRR5A0A1B0GTR4 108 aa5.62□□□□□ -1.51
PSEN1-210ENST00000554131 MT1AP04731 61 aa5.61□□□□□ -1.51
PSEN1-210ENST00000554131 SVIPQ8NHG7 77 aa5.59□□□□□ -1.51
PSEN1-210ENST00000554131 SYNE1Q8NF91 8797 aaKnown RBP5.58□□□□□ -1.52
PSEN1-210ENST00000554131 KRTAP6-1Q3LI64 71 aa5.57□□□□□ -1.52
PSEN1-210ENST00000554131 KRTAP12-4P60329 112 aa5.53□□□□□ -1.52
PSEN1-210ENST00000554131 KRTAP20-2Q3LI61 65 aa5.52□□□□□ -1.53
PSEN1-210ENST00000554131 KRTAP5-3Q6L8H2 238 aa5.38□□□□□ -1.55
PSEN1-210ENST00000554131 KRTAP9-4Q9BYQ2 154 aa5.37□□□□□ -1.55
PSEN1-210ENST00000554131 AHNAK2Q8IVF2 5795 aa5.3□□□□□ -1.56
PSEN1-210ENST00000554131 KRTAP5-2Q701N4 177 aa5.28□□□□□ -1.56
PSEN1-210ENST00000554131 KRTAP6-2Q3LI66 62 aa5.21□□□□□ -1.58
PSEN1-210ENST00000554131 KRTAP5-10Q6L8G5 202 aa5.14□□□□□ -1.59
PSEN1-210ENST00000554131 MT3P25713 68 aa5.08□□□□□ -1.6
PSEN1-210ENST00000554131 LUZP6Q538Z0 58 aa4.97□□□□□ -1.61
PSEN1-210ENST00000554131 KRTAP5-7Q6L8G8 165 aa4.92□□□□□ -1.62
PSEN1-210ENST00000554131 KRTAP4-11Q9BYQ6 195 aa4.91□□□□□ -1.62
PSEN1-210ENST00000554131 AHNAKQ09666 5890 aaKnown RBP4.86□□□□□ -1.63
PSEN1-210ENST00000554131 KRTAP5-8O75690 187 aa4.77□□□□□ -1.65
PSEN1-210ENST00000554131 OBSCNQ5VST9 7968 aa4.74□□□□□ -1.65
PSEN1-210ENST00000554131 MUC5BQ9HC84 5762 aaPredicted RBP4.67□□□□□ -1.66
PSEN1-210ENST00000554131 KRTAP5-1Q6L8H4 278 aa4.64□□□□□ -1.67
PSEN1-210ENST00000554131 LCE1EQ5T753 118 aa4.58□□□□□ -1.68
PSEN1-210ENST00000554131 NDUFAF8A1L188 74 aa4.51□□□□□ -1.69
PSEN1-210ENST00000554131 LCE3DQ9BYE3 92 aa4.51□□□□□ -1.69
PSEN1-210ENST00000554131 MUC5ACP98088 5654 aa4.49□□□□□ -1.69
PSEN1-210ENST00000554131 KRTAP9-9Q9BYP9 154 aa4.35□□□□□ -1.71
PSEN1-210ENST00000554131 LCE3EQ5T5B0 92 aa4.32□□□□□ -1.72
PSEN1-210ENST00000554131 KRTAP4-2Q9BYR5 136 aa4.32□□□□□ -1.72
PSEN1-210ENST00000554131 LCE1CQ5T751 118 aa4.26□□□□□ -1.73
PSEN1-210ENST00000554131 LCE1BQ5T7P3 118 aa4.26□□□□□ -1.73
PSEN1-210ENST00000554131 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.96□□□□□ -1.78
PSEN1-210ENST00000554131 KRTAP5-11Q6L8G4 156 aa3.82□□□□□ -1.8
PSEN1-210ENST00000554131 H3BS24 57 aa3.76□□□□□ -1.81
PSEN1-210ENST00000554131 A0A0A0MQY5 61 aa3.73□□□□□ -1.81
PSEN1-210ENST00000554131 KRTAP21-2Q3LI59 83 aa3.69□□□□□ -1.82
PSEN1-210ENST00000554131 KRTAP4-12Q9BQ66 201 aa3.69□□□□□ -1.82
PSEN1-210ENST00000554131 INE1O15225 51 aa3.68□□□□□ -1.82
PSEN1-210ENST00000554131 LCE1FQ5T754 118 aa3.57□□□□□ -1.84
PSEN1-210ENST00000554131 PRM1P04553 51 aa3.52□□□□□ -1.85
PSEN1-210ENST00000554131 PHGR1C9JFL3 82 aa3.28□□□□□ -1.88
PSEN1-210ENST00000554131 KRTAP4-4Q9BYR3 166 aa3.26□□□□□ -1.89
PSEN1-210ENST00000554131 MUC19Q7Z5P9 8384 aa2.88□□□□□ -1.95
PSEN1-210ENST00000554131 KRTAP21-1Q3LI58 79 aa2.26□□□□□ -2.05
PSEN1-210ENST00000554131 MUC16Q8WXI7 14507 aa2.13□□□□□ -2.07
Retrieved 78 of 20,778 RNA–protein pairs in 130.7 ms