RNA–Protein interactions for RNA: ENST00000554018.1

TRAPPC6B-204, Transcript of trafficking protein particle complex 6B, humanhuman

TSL 4

Gene TRAPPC6B, Length 541 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC6B-204ENST00000554018 HMCN1Q96RW7 5635 aa4.27□□□□□ -1.73
TRAPPC6B-204ENST00000554018 SMIM26A0A096LP01 95 aa4.27□□□□□ -1.73
TRAPPC6B-204ENST00000554018 PP632Q6XCG6 107 aa4.24□□□□□ -1.73
TRAPPC6B-204ENST00000554018 MT1MQ8N339 61 aa4.23□□□□□ -1.73
TRAPPC6B-204ENST00000554018 KRTAP15-1Q3LI76 137 aa4.22□□□□□ -1.73
TRAPPC6B-204ENST00000554018 MT1LQ93083 61 aa4.22□□□□□ -1.73
TRAPPC6B-204ENST00000554018 C10orf95Q9H7T3 257 aa4.21□□□□□ -1.74
TRAPPC6B-204ENST00000554018 LCE3AQ5TA76 89 aa4.2□□□□□ -1.74
TRAPPC6B-204ENST00000554018 ANAPC13Q9BS18 74 aa4.2□□□□□ -1.74
TRAPPC6B-204ENST00000554018 AHNAK2Q8IVF2 5795 aa4.19□□□□□ -1.74
TRAPPC6B-204ENST00000554018 TNP1P09430 55 aa4.18□□□□□ -1.74
TRAPPC6B-204ENST00000554018 KRTAP4-3Q9BYR4 195 aa4.16□□□□□ -1.74
TRAPPC6B-204ENST00000554018 CCDC179H3BU77 68 aa4.15□□□□□ -1.75
TRAPPC6B-204ENST00000554018 MT4P47944 62 aa4.14□□□□□ -1.75
TRAPPC6B-204ENST00000554018 PRR15LQ9BU68 103 aa4.12□□□□□ -1.75
TRAPPC6B-204ENST00000554018 ATP5EP56381 51 aaPredicted RBP4.08□□□□□ -1.76
TRAPPC6B-204ENST00000554018 KRTAP5-4Q6L8H1 288 aa4.07□□□□□ -1.76
TRAPPC6B-204ENST00000554018 LINC01558Q9Y6Z2 57 aa4.07□□□□□ -1.76
TRAPPC6B-204ENST00000554018 KRTAP12-3P60328 96 aa4.04□□□□□ -1.76
TRAPPC6B-204ENST00000554018 UQCR11O14957 56 aa3.99□□□□□ -1.77
TRAPPC6B-204ENST00000554018 TMEM258P61165 79 aa3.94□□□□□ -1.78
TRAPPC6B-204ENST00000554018 KRTAP5-10Q6L8G5 202 aa3.93□□□□□ -1.78
TRAPPC6B-204ENST00000554018 MIR22HGQ0VDD5 57 aa3.9□□□□□ -1.79
TRAPPC6B-204ENST00000554018 KRTAP25-1Q3LHN0 102 aa3.9□□□□□ -1.79
TRAPPC6B-204ENST00000554018 KRTAP5-5Q701N2 237 aaPredicted RBP3.88□□□□□ -1.79
TRAPPC6B-204ENST00000554018 SVIPQ8NHG7 77 aa3.86□□□□□ -1.79
TRAPPC6B-204ENST00000554018 KRTAP20-2Q3LI61 65 aa3.85□□□□□ -1.79
TRAPPC6B-204ENST00000554018 SYNE1Q8NF91 8797 aaKnown RBP3.83□□□□□ -1.8
TRAPPC6B-204ENST00000554018 K7ERS5 55 aa3.82□□□□□ -1.8
TRAPPC6B-204ENST00000554018 SPRR5A0A1B0GTR4 108 aa3.81□□□□□ -1.8
TRAPPC6B-204ENST00000554018 KRTAP5-3Q6L8H2 238 aa3.81□□□□□ -1.8
TRAPPC6B-204ENST00000554018 PSPHP1O15172 72 aa3.8□□□□□ -1.8
TRAPPC6B-204ENST00000554018 KRTAP12-4P60329 112 aa3.79□□□□□ -1.8
TRAPPC6B-204ENST00000554018 KRTAP5-7Q6L8G8 165 aa3.78□□□□□ -1.8
TRAPPC6B-204ENST00000554018 V9GYY9 64 aa3.75□□□□□ -1.81
TRAPPC6B-204ENST00000554018 Q1T7F1 81 aa3.74□□□□□ -1.81
TRAPPC6B-204ENST00000554018 LCE3CQ5T5A8 94 aa3.71□□□□□ -1.82
TRAPPC6B-204ENST00000554018 PCP4P48539 62 aa3.68□□□□□ -1.82
TRAPPC6B-204ENST00000554018 A6NED7 52 aa3.65□□□□□ -1.83
TRAPPC6B-204ENST00000554018 CDC42SE1Q9NRR8 79 aa3.62□□□□□ -1.83
TRAPPC6B-204ENST00000554018 A0A0A0MQY5 61 aa3.59□□□□□ -1.83
TRAPPC6B-204ENST00000554018 KRTAP6-1Q3LI64 71 aa3.59□□□□□ -1.83
TRAPPC6B-204ENST00000554018 MT1AP04731 61 aa3.58□□□□□ -1.84
TRAPPC6B-204ENST00000554018 ROMO1P60602 79 aa3.57□□□□□ -1.84
TRAPPC6B-204ENST00000554018 KRTAP5-2Q701N4 177 aa3.56□□□□□ -1.84
TRAPPC6B-204ENST00000554018 RPS28P62857 69 aaKnown RBP3.54□□□□□ -1.84
TRAPPC6B-204ENST00000554018 KRTAP9-6A8MVA2 160 aa3.53□□□□□ -1.84
TRAPPC6B-204ENST00000554018 AHNAKQ09666 5890 aaKnown RBP3.52□□□□□ -1.85
TRAPPC6B-204ENST00000554018 MUC5BQ9HC84 5762 aaPredicted RBP3.46□□□□□ -1.86
TRAPPC6B-204ENST00000554018 KRTAP6-2Q3LI66 62 aa3.45□□□□□ -1.86
TRAPPC6B-204ENST00000554018 MUC5ACP98088 5654 aa3.41□□□□□ -1.86
TRAPPC6B-204ENST00000554018 KRTAP5-8O75690 187 aa3.41□□□□□ -1.86
TRAPPC6B-204ENST00000554018 OBSCNQ5VST9 7968 aa3.39□□□□□ -1.87
TRAPPC6B-204ENST00000554018 MT3P25713 68 aa3.28□□□□□ -1.88
TRAPPC6B-204ENST00000554018 KRTAP5-1Q6L8H4 278 aa3.2□□□□□ -1.9
TRAPPC6B-204ENST00000554018 LCE1EQ5T753 118 aa3.02□□□□□ -1.93
TRAPPC6B-204ENST00000554018 BRK1Q8WUW1 75 aa3.01□□□□□ -1.93
TRAPPC6B-204ENST00000554018 KRTAP5-11Q6L8G4 156 aa2.99□□□□□ -1.93
TRAPPC6B-204ENST00000554018 PRAC1Q96KF2 57 aa2.97□□□□□ -1.93
TRAPPC6B-204ENST00000554018 LCE1FQ5T754 118 aa2.96□□□□□ -1.94
TRAPPC6B-204ENST00000554018 NDUFAF8A1L188 74 aa2.9□□□□□ -1.95
TRAPPC6B-204ENST00000554018 LCE1BQ5T7P3 118 aa2.88□□□□□ -1.95
TRAPPC6B-204ENST00000554018 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.88□□□□□ -1.95
TRAPPC6B-204ENST00000554018 PMAIP1Q13794 54 aa2.82□□□□□ -1.96
TRAPPC6B-204ENST00000554018 LCE1CQ5T751 118 aa2.81□□□□□ -1.96
TRAPPC6B-204ENST00000554018 LCE3DQ9BYE3 92 aa2.66□□□□□ -1.98
TRAPPC6B-204ENST00000554018 LCE3EQ5T5B0 92 aa2.54□□□□□ -2
TRAPPC6B-204ENST00000554018 PRO0628Q9UI54 55 aa2.48□□□□□ -2.01
TRAPPC6B-204ENST00000554018 KTN1-AS1Q86SY8 53 aa2.41□□□□□ -2.02
TRAPPC6B-204ENST00000554018 KRTAP4-4Q9BYR3 166 aa2.39□□□□□ -2.03
TRAPPC6B-204ENST00000554018 KRTAP21-2Q3LI59 83 aa2.36□□□□□ -2.03
TRAPPC6B-204ENST00000554018 LUZP6Q538Z0 58 aa2.32□□□□□ -2.04
TRAPPC6B-204ENST00000554018 PHGR1C9JFL3 82 aa2.29□□□□□ -2.04
TRAPPC6B-204ENST00000554018 MUC19Q7Z5P9 8384 aa2.13□□□□□ -2.07
TRAPPC6B-204ENST00000554018 PRM1P04553 51 aa1.83□□□□□ -2.12
TRAPPC6B-204ENST00000554018 KRTAP21-1Q3LI58 79 aa1.73□□□□□ -2.13
TRAPPC6B-204ENST00000554018 INE1O15225 51 aa1.53□□□□□ -2.16
TRAPPC6B-204ENST00000554018 MUC16Q8WXI7 14507 aa1.47□□□□□ -2.17
Retrieved 78 of 20,778 RNA–protein pairs in 104.6 ms