RNA–Protein interactions for RNA: ENST00000553942.5

MARK3-207, Transcript of microtubule affinity regulating kinase 3, humanhuman

TSL 1 (best) BASIC

Gene MARK3, Length 2,298 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MARK3-207ENST00000553942 CRCT1Q9UGL9 99 aa3.72□□□□□ -1.81
MARK3-207ENST00000553942 KRTAP10-7P60409 375 aaPredicted RBP3.7□□□□□ -1.82
MARK3-207ENST00000553942 KRTAP19-6Q3LI70 58 aa3.7□□□□□ -1.82
MARK3-207ENST00000553942 SYNE2Q8WXH0 6885 aaKnown RBP3.68□□□□□ -1.82
MARK3-207ENST00000553942 LCE1DQ5T752 114 aa3.62□□□□□ -1.83
MARK3-207ENST00000553942 LCE5AQ5TCM9 118 aa3.61□□□□□ -1.83
MARK3-207ENST00000553942 MUC12Q9UKN1 5478 aa3.54□□□□□ -1.84
MARK3-207ENST00000553942 LCE3AQ5TA76 89 aa3.54□□□□□ -1.84
MARK3-207ENST00000553942 KRTAP10-12P60413 245 aa3.53□□□□□ -1.85
MARK3-207ENST00000553942 KRTAP4-2Q9BYR5 136 aa3.53□□□□□ -1.85
MARK3-207ENST00000553942 KRTAP8-1Q8IUC2 63 aa3.46□□□□□ -1.85
MARK3-207ENST00000553942 KRTAP4-9Q9BYQ8 210 aa3.46□□□□□ -1.86
MARK3-207ENST00000553942 MDN1Q9NU22 5596 aa3.46□□□□□ -1.86
MARK3-207ENST00000553942 KRTAP19-5Q3LI72 72 aa3.43□□□□□ -1.86
MARK3-207ENST00000553942 DSTQ03001 7570 aaKnown RBP3.41□□□□□ -1.86
MARK3-207ENST00000553942 KRTAP4-11Q9BYQ6 195 aa3.41□□□□□ -1.86
MARK3-207ENST00000553942 KRTAP19-7Q3SYF9 63 aa3.39□□□□□ -1.87
MARK3-207ENST00000553942 SPRR2FQ96RM1 72 aa3.39□□□□□ -1.87
MARK3-207ENST00000553942 KRTAP12-3P60328 96 aa3.33□□□□□ -1.88
MARK3-207ENST00000553942 MT1EP04732 61 aa3.31□□□□□ -1.88
MARK3-207ENST00000553942 KRTAP5-9P26371 169 aa3.26□□□□□ -1.89
MARK3-207ENST00000553942 KRTAP6-3Q3LI67 103 aa3.24□□□□□ -1.89
MARK3-207ENST00000553942 KRTAP4-3Q9BYR4 195 aa3.23□□□□□ -1.89
MARK3-207ENST00000553942 MT1LQ93083 61 aa3.23□□□□□ -1.89
MARK3-207ENST00000553942 SPRR2EP22531 72 aa3.22□□□□□ -1.89
MARK3-207ENST00000553942 SPRR2BP35325 72 aa3.22□□□□□ -1.89
MARK3-207ENST00000553942 SPRR2AP35326 72 aa3.22□□□□□ -1.89
MARK3-207ENST00000553942 LCE1AQ5T7P2 110 aa3.22□□□□□ -1.89
MARK3-207ENST00000553942 KRTAP2-3P0C7H8 128 aa3.19□□□□□ -1.9
MARK3-207ENST00000553942 KRTAP2-4Q9BYR9 128 aa3.19□□□□□ -1.9
MARK3-207ENST00000553942 KRTAP2-1Q9BYU5 128 aa3.19□□□□□ -1.9
MARK3-207ENST00000553942 KRTAP19-3Q7Z4W3 81 aa3.18□□□□□ -1.9
MARK3-207ENST00000553942 LCE3CQ5T5A8 94 aa3.16□□□□□ -1.9
MARK3-207ENST00000553942 NEBP20929 6669 aa3.15□□□□□ -1.91
MARK3-207ENST00000553942 MT1MQ8N339 61 aa3.13□□□□□ -1.91
MARK3-207ENST00000553942 MT1GP13640 62 aa3.1□□□□□ -1.91
MARK3-207ENST00000553942 SPRR2DP22532 72 aa3.08□□□□□ -1.92
MARK3-207ENST00000553942 KRTAP9-6A8MVA2 160 aa3.05□□□□□ -1.92
MARK3-207ENST00000553942 HMCN1Q96RW7 5635 aa3.03□□□□□ -1.93
MARK3-207ENST00000553942 SYNE1Q8NF91 8797 aaKnown RBP2.98□□□□□ -1.93
MARK3-207ENST00000553942 MT3P25713 68 aa2.91□□□□□ -1.94
MARK3-207ENST00000553942 KRTAP2-2Q9BYT5 123 aa2.9□□□□□ -1.95
MARK3-207ENST00000553942 KRTAP20-1Q3LI63 56 aa2.88□□□□□ -1.95
MARK3-207ENST00000553942 KRTAP12-4P60329 112 aa2.85□□□□□ -1.95
MARK3-207ENST00000553942 OBSCNQ5VST9 7968 aa2.85□□□□□ -1.95
MARK3-207ENST00000553942 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.84□□□□□ -1.95
MARK3-207ENST00000553942 KRTAP5-5Q701N2 237 aaPredicted RBP2.8□□□□□ -1.96
MARK3-207ENST00000553942 LCE1FQ5T754 118 aa2.79□□□□□ -1.96
MARK3-207ENST00000553942 MT4P47944 62 aa2.78□□□□□ -1.96
MARK3-207ENST00000553942 KRTAP6-1Q3LI64 71 aa2.78□□□□□ -1.96
MARK3-207ENST00000553942 KRTAP5-4Q6L8H1 288 aa2.69□□□□□ -1.98
MARK3-207ENST00000553942 MT1AP04731 61 aa2.68□□□□□ -1.98
MARK3-207ENST00000553942 KRTAP6-2Q3LI66 62 aa2.58□□□□□ -2
MARK3-207ENST00000553942 KRTAP20-2Q3LI61 65 aa2.58□□□□□ -2
MARK3-207ENST00000553942 PRM1P04553 51 aa2.57□□□□□ -2
MARK3-207ENST00000553942 LCE3EQ5T5B0 92 aa2.52□□□□□ -2.01
MARK3-207ENST00000553942 LCE3DQ9BYE3 92 aa2.49□□□□□ -2.01
MARK3-207ENST00000553942 KRTAP5-2Q701N4 177 aa2.42□□□□□ -2.02
MARK3-207ENST00000553942 LCE1EQ5T753 118 aa2.4□□□□□ -2.02
MARK3-207ENST00000553942 AHNAK2Q8IVF2 5795 aa2.38□□□□□ -2.03
MARK3-207ENST00000553942 KRTAP5-11Q6L8G4 156 aa2.31□□□□□ -2.04
MARK3-207ENST00000553942 GPR98Q8WXG9 6306 aa2.25□□□□□ -2.05
MARK3-207ENST00000553942 KRTAP5-10Q6L8G5 202 aa2.25□□□□□ -2.05
MARK3-207ENST00000553942 KRTAP5-8O75690 187 aa2.23□□□□□ -2.05
MARK3-207ENST00000553942 KRTAP4-4Q9BYR3 166 aa2.21□□□□□ -2.06
MARK3-207ENST00000553942 KRTAP5-1Q6L8H4 278 aa2.16□□□□□ -2.06
MARK3-207ENST00000553942 MUC5ACP98088 5654 aa2.15□□□□□ -2.07
MARK3-207ENST00000553942 LCE1BQ5T7P3 118 aa2.15□□□□□ -2.07
MARK3-207ENST00000553942 MUC5BQ9HC84 5762 aaPredicted RBP2.07□□□□□ -2.08
MARK3-207ENST00000553942 KRTAP5-7Q6L8G8 165 aa2.03□□□□□ -2.08
MARK3-207ENST00000553942 LCE1CQ5T751 118 aa1.97□□□□□ -2.09
MARK3-207ENST00000553942 AHNAKQ09666 5890 aaKnown RBP1.82□□□□□ -2.12
MARK3-207ENST00000553942 KRTAP21-2Q3LI59 83 aa1.79□□□□□ -2.12
MARK3-207ENST00000553942 KRTAP21-1Q3LI58 79 aa1.73□□□□□ -2.13
MARK3-207ENST00000553942 MUC19Q7Z5P9 8384 aa1.7□□□□□ -2.14
MARK3-207ENST00000553942 PHGR1C9JFL3 82 aa1.52□□□□□ -2.17
MARK3-207ENST00000553942 MUC16Q8WXI7 14507 aa0.94□□□□□ -2.26
Retrieved 77 of 20,778 RNA–protein pairs in 72 ms