RNA–Protein interactions for RNA: ENST00000553937.1

SDR39U1-207, Transcript of short chain dehydrogenase/reductase family 39U member 1, humanhuman

TSL 3

Gene SDR39U1, Length 217 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDR39U1-207ENST00000553937 KRTAP19-5Q3LI72 72 aa3.32□□□□□ -1.88
SDR39U1-207ENST00000553937 LCE3AQ5TA76 89 aa3.32□□□□□ -1.88
SDR39U1-207ENST00000553937 KRTAP4-9Q9BYQ8 210 aa3.31□□□□□ -1.88
SDR39U1-207ENST00000553937 K7ERS5 55 aa3.3□□□□□ -1.88
SDR39U1-207ENST00000553937 MT1GP13640 62 aa3.27□□□□□ -1.89
SDR39U1-207ENST00000553937 GPR98Q8WXG9 6306 aa3.25□□□□□ -1.89
SDR39U1-207ENST00000553937 PP632Q6XCG6 107 aa3.24□□□□□ -1.89
SDR39U1-207ENST00000553937 MT1MQ8N339 61 aa3.23□□□□□ -1.89
SDR39U1-207ENST00000553937 LCE1DQ5T752 114 aa3.22□□□□□ -1.89
SDR39U1-207ENST00000553937 MT1LQ93083 61 aa3.22□□□□□ -1.89
SDR39U1-207ENST00000553937 CDC42SE1Q9NRR8 79 aa3.22□□□□□ -1.89
SDR39U1-207ENST00000553937 KRTAP25-1Q3LHN0 102 aa3.2□□□□□ -1.9
SDR39U1-207ENST00000553937 MT4P47944 62 aa3.18□□□□□ -1.9
SDR39U1-207ENST00000553937 LCE4AQ5TA78 99 aa3.18□□□□□ -1.9
SDR39U1-207ENST00000553937 HMCN1Q96RW7 5635 aa3.18□□□□□ -1.9
SDR39U1-207ENST00000553937 KRTAP4-3Q9BYR4 195 aa3.17□□□□□ -1.9
SDR39U1-207ENST00000553937 KRTAP12-3P60328 96 aa3.16□□□□□ -1.9
SDR39U1-207ENST00000553937 ROMO1P60602 79 aa3.15□□□□□ -1.91
SDR39U1-207ENST00000553937 KRTAP5-4Q6L8H1 288 aa3.12□□□□□ -1.91
SDR39U1-207ENST00000553937 KRTAP4-7Q9BYR0 210 aa3.11□□□□□ -1.91
SDR39U1-207ENST00000553937 AHNAK2Q8IVF2 5795 aa3.09□□□□□ -1.91
SDR39U1-207ENST00000553937 BRK1Q8WUW1 75 aa3.09□□□□□ -1.91
SDR39U1-207ENST00000553937 KRTAP4-6Q9BYQ5 205 aa3.08□□□□□ -1.92
SDR39U1-207ENST00000553937 KRTAP23-1A1A580 65 aa3.03□□□□□ -1.92
SDR39U1-207ENST00000553937 KRTAP5-10Q6L8G5 202 aa3.02□□□□□ -1.93
SDR39U1-207ENST00000553937 KRTAP15-1Q3LI76 137 aa3□□□□□ -1.93
SDR39U1-207ENST00000553937 KRTAP5-5Q701N2 237 aaPredicted RBP2.97□□□□□ -1.93
SDR39U1-207ENST00000553937 KRTAP20-2Q3LI61 65 aa2.95□□□□□ -1.94
SDR39U1-207ENST00000553937 KRTAP5-3Q6L8H2 238 aa2.94□□□□□ -1.94
SDR39U1-207ENST00000553937 LOC100996750A0A140TA64 210 aa2.93□□□□□ -1.94
SDR39U1-207ENST00000553937 SPRR5A0A1B0GTR4 108 aa2.92□□□□□ -1.94
SDR39U1-207ENST00000553937 LCE3CQ5T5A8 94 aa2.92□□□□□ -1.94
SDR39U1-207ENST00000553937 KRTAP5-7Q6L8G8 165 aa2.91□□□□□ -1.94
SDR39U1-207ENST00000553937 SYNE1Q8NF91 8797 aaKnown RBP2.89□□□□□ -1.95
SDR39U1-207ENST00000553937 KRTAP12-4P60329 112 aa2.89□□□□□ -1.95
SDR39U1-207ENST00000553937 PMAIP1Q13794 54 aa2.89□□□□□ -1.95
SDR39U1-207ENST00000553937 KRTAP19-4Q3LI73 84 aa2.84□□□□□ -1.95
SDR39U1-207ENST00000553937 PRAC1Q96KF2 57 aa2.83□□□□□ -1.96
SDR39U1-207ENST00000553937 KRTAP9-6A8MVA2 160 aa2.8□□□□□ -1.96
SDR39U1-207ENST00000553937 PRO0628Q9UI54 55 aa2.78□□□□□ -1.96
SDR39U1-207ENST00000553937 MT1AP04731 61 aa2.74□□□□□ -1.97
SDR39U1-207ENST00000553937 KRTAP6-1Q3LI64 71 aa2.73□□□□□ -1.97
SDR39U1-207ENST00000553937 KRTAP5-2Q701N4 177 aa2.72□□□□□ -1.97
SDR39U1-207ENST00000553937 KRTAP4-11Q9BYQ6 195 aa2.7□□□□□ -1.98
SDR39U1-207ENST00000553937 KRTAP9-4Q9BYQ2 154 aa2.64□□□□□ -1.99
SDR39U1-207ENST00000553937 KRTAP5-8O75690 187 aa2.63□□□□□ -1.99
SDR39U1-207ENST00000553937 KTN1-AS1Q86SY8 53 aa2.63□□□□□ -1.99
SDR39U1-207ENST00000553937 KRTAP6-2Q3LI66 62 aa2.62□□□□□ -1.99
SDR39U1-207ENST00000553937 MUC5ACP98088 5654 aa2.58□□□□□ -2
SDR39U1-207ENST00000553937 OBSCNQ5VST9 7968 aa2.57□□□□□ -2
SDR39U1-207ENST00000553937 SVIPQ8NHG7 77 aa2.56□□□□□ -2
SDR39U1-207ENST00000553937 AHNAKQ09666 5890 aaKnown RBP2.55□□□□□ -2
SDR39U1-207ENST00000553937 MUC5BQ9HC84 5762 aaPredicted RBP2.53□□□□□ -2
SDR39U1-207ENST00000553937 MT3P25713 68 aa2.49□□□□□ -2.01
SDR39U1-207ENST00000553937 KRTAP9-9Q9BYP9 154 aa2.49□□□□□ -2.01
SDR39U1-207ENST00000553937 KRTAP5-1Q6L8H4 278 aa2.45□□□□□ -2.02
SDR39U1-207ENST00000553937 LCE1EQ5T753 118 aa2.3□□□□□ -2.04
SDR39U1-207ENST00000553937 LUZP6Q538Z0 58 aa2.25□□□□□ -2.05
SDR39U1-207ENST00000553937 KRTAP4-2Q9BYR5 136 aa2.2□□□□□ -2.06
SDR39U1-207ENST00000553937 LCE1BQ5T7P3 118 aa2.19□□□□□ -2.06
SDR39U1-207ENST00000553937 LCE1CQ5T751 118 aa2.14□□□□□ -2.07
SDR39U1-207ENST00000553937 LCE3DQ9BYE3 92 aa2.14□□□□□ -2.07
SDR39U1-207ENST00000553937 NDUFAF8A1L188 74 aa2.03□□□□□ -2.08
SDR39U1-207ENST00000553937 LCE3EQ5T5B0 92 aa2.03□□□□□ -2.08
SDR39U1-207ENST00000553937 KRTAP4-12Q9BQ66 201 aa2.03□□□□□ -2.08
SDR39U1-207ENST00000553937 KRTAP5-11Q6L8G4 156 aa1.96□□□□□ -2.1
SDR39U1-207ENST00000553937 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.94□□□□□ -2.1
SDR39U1-207ENST00000553937 LCE1FQ5T754 118 aa1.91□□□□□ -2.1
SDR39U1-207ENST00000553937 KRTAP21-2Q3LI59 83 aa1.8□□□□□ -2.12
SDR39U1-207ENST00000553937 PHGR1C9JFL3 82 aa1.77□□□□□ -2.13
SDR39U1-207ENST00000553937 KRTAP4-4Q9BYR3 166 aa1.67□□□□□ -2.14
SDR39U1-207ENST00000553937 PRM1P04553 51 aa1.66□□□□□ -2.14
SDR39U1-207ENST00000553937 A0A0A0MQY5 61 aa1.6□□□□□ -2.15
SDR39U1-207ENST00000553937 MUC19Q7Z5P9 8384 aa1.59□□□□□ -2.15
SDR39U1-207ENST00000553937 INE1O15225 51 aa1.56□□□□□ -2.16
SDR39U1-207ENST00000553937 KRTAP21-1Q3LI58 79 aa1.33□□□□□ -2.2
SDR39U1-207ENST00000553937 H3BS24 57 aa1.15□□□□□ -2.23
SDR39U1-207ENST00000553937 MUC16Q8WXI7 14507 aa1.1□□□□□ -2.23
Retrieved 78 of 20,778 RNA–protein pairs in 71.4 ms