RNA–Protein interactions for RNA: ENST00000553927.1

RPGRIP1-204, Transcript of RPGR interacting protein 1, humanhuman

TSL 2

Gene RPGRIP1, Length 2,875 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPGRIP1-204ENST00000553927 KRTAP10-7P60409 375 aaPredicted RBP2.59□□□□□ -2
RPGRIP1-204ENST00000553927 KRTAP10-5P60370 271 aa2.58□□□□□ -2
RPGRIP1-204ENST00000553927 KMT2DO14686 5537 aa2.57□□□□□ -2
RPGRIP1-204ENST00000553927 MT1XP80297 61 aa2.57□□□□□ -2
RPGRIP1-204ENST00000553927 MT2AP02795 61 aa2.55□□□□□ -2
RPGRIP1-204ENST00000553927 MT1BP07438 61 aa2.52□□□□□ -2.01
RPGRIP1-204ENST00000553927 MT1HP80294 61 aa2.52□□□□□ -2.01
RPGRIP1-204ENST00000553927 KRTAP2-2Q9BYT5 123 aa2.52□□□□□ -2.01
RPGRIP1-204ENST00000553927 KRTAP19-5Q3LI72 72 aa2.5□□□□□ -2.01
RPGRIP1-204ENST00000553927 KRTAP9-6A8MVA2 160 aa2.5□□□□□ -2.01
RPGRIP1-204ENST00000553927 LCE3CQ5T5A8 94 aa2.5□□□□□ -2.01
RPGRIP1-204ENST00000553927 USH2AO75445 5202 aa2.48□□□□□ -2.01
RPGRIP1-204ENST00000553927 KRTAP19-8Q3LI54 63 aa2.47□□□□□ -2.01
RPGRIP1-204ENST00000553927 LCE1AQ5T7P2 110 aa2.44□□□□□ -2.02
RPGRIP1-204ENST00000553927 CRCT1Q9UGL9 99 aa2.42□□□□□ -2.02
RPGRIP1-204ENST00000553927 MUC5BQ9HC84 5762 aaPredicted RBP2.4□□□□□ -2.03
RPGRIP1-204ENST00000553927 LCE1EQ5T753 118 aa2.38□□□□□ -2.03
RPGRIP1-204ENST00000553927 KRTAP2-3P0C7H8 128 aa2.37□□□□□ -2.03
RPGRIP1-204ENST00000553927 KRTAP2-4Q9BYR9 128 aa2.37□□□□□ -2.03
RPGRIP1-204ENST00000553927 KRTAP2-1Q9BYU5 128 aa2.37□□□□□ -2.03
RPGRIP1-204ENST00000553927 LCE3EQ5T5B0 92 aa2.34□□□□□ -2.03
RPGRIP1-204ENST00000553927 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.32□□□□□ -2.04
RPGRIP1-204ENST00000553927 KRTAP19-7Q3SYF9 63 aa2.28□□□□□ -2.04
RPGRIP1-204ENST00000553927 FSIP2Q5CZC0 6907 aa2.27□□□□□ -2.05
RPGRIP1-204ENST00000553927 KRTAP12-4P60329 112 aa2.26□□□□□ -2.05
RPGRIP1-204ENST00000553927 KRTAP4-3Q9BYR4 195 aa2.25□□□□□ -2.05
RPGRIP1-204ENST00000553927 MT1LQ93083 61 aa2.23□□□□□ -2.05
RPGRIP1-204ENST00000553927 MT1GP13640 62 aa2.2□□□□□ -2.06
RPGRIP1-204ENST00000553927 FCGBPQ9Y6R7 5405 aaPredicted RBP2.2□□□□□ -2.06
RPGRIP1-204ENST00000553927 MT1EP04732 61 aa2.19□□□□□ -2.06
RPGRIP1-204ENST00000553927 DSTQ03001 7570 aaKnown RBP2.17□□□□□ -2.06
RPGRIP1-204ENST00000553927 MT3P25713 68 aa2.16□□□□□ -2.06
RPGRIP1-204ENST00000553927 MUC12Q9UKN1 5478 aa2.16□□□□□ -2.06
RPGRIP1-204ENST00000553927 KRTAP6-3Q3LI67 103 aa2.16□□□□□ -2.06
RPGRIP1-204ENST00000553927 LCE3DQ9BYE3 92 aa2.15□□□□□ -2.07
RPGRIP1-204ENST00000553927 SYNE1Q8NF91 8797 aaKnown RBP2.12□□□□□ -2.07
RPGRIP1-204ENST00000553927 KRTAP5-9P26371 169 aa2.08□□□□□ -2.08
RPGRIP1-204ENST00000553927 SSPOA2VEC9 5147 aa2.08□□□□□ -2.08
RPGRIP1-204ENST00000553927 KRTAP19-6Q3LI70 58 aa2.08□□□□□ -2.08
RPGRIP1-204ENST00000553927 GPR98Q8WXG9 6306 aa2.07□□□□□ -2.08
RPGRIP1-204ENST00000553927 PRM1P04553 51 aa2.05□□□□□ -2.08
RPGRIP1-204ENST00000553927 OBSCNQ5VST9 7968 aa2.04□□□□□ -2.08
RPGRIP1-204ENST00000553927 KRTAP5-11Q6L8G4 156 aa2.04□□□□□ -2.08
RPGRIP1-204ENST00000553927 MT1MQ8N339 61 aa2.04□□□□□ -2.08
RPGRIP1-204ENST00000553927 MACF1Q9UPN3 7388 aaKnown RBP2.02□□□□□ -2.09
RPGRIP1-204ENST00000553927 SYNE2Q8WXH0 6885 aaKnown RBP2□□□□□ -2.09
RPGRIP1-204ENST00000553927 KRTAP20-1Q3LI63 56 aa2□□□□□ -2.09
RPGRIP1-204ENST00000553927 KRTAP5-4Q6L8H1 288 aa1.99□□□□□ -2.09
RPGRIP1-204ENST00000553927 KRTAP5-1Q6L8H4 278 aa1.99□□□□□ -2.09
RPGRIP1-204ENST00000553927 KRTAP19-3Q7Z4W3 81 aa1.98□□□□□ -2.09
RPGRIP1-204ENST00000553927 KRTAP5-5Q701N2 237 aaPredicted RBP1.98□□□□□ -2.09
RPGRIP1-204ENST00000553927 KRTAP6-1Q3LI64 71 aa1.95□□□□□ -2.1
RPGRIP1-204ENST00000553927 NEBP20929 6669 aa1.95□□□□□ -2.1
RPGRIP1-204ENST00000553927 KRTAP4-4Q9BYR3 166 aa1.94□□□□□ -2.1
RPGRIP1-204ENST00000553927 KRTAP6-2Q3LI66 62 aa1.89□□□□□ -2.11
RPGRIP1-204ENST00000553927 MT1AP04731 61 aa1.89□□□□□ -2.11
RPGRIP1-204ENST00000553927 SPRR2FQ96RM1 72 aa1.89□□□□□ -2.11
RPGRIP1-204ENST00000553927 SPRR2EP22531 72 aa1.84□□□□□ -2.11
RPGRIP1-204ENST00000553927 SPRR2BP35325 72 aa1.84□□□□□ -2.11
RPGRIP1-204ENST00000553927 SPRR2AP35326 72 aa1.84□□□□□ -2.11
RPGRIP1-204ENST00000553927 MDN1Q9NU22 5596 aa1.83□□□□□ -2.12
RPGRIP1-204ENST00000553927 SPRR2DP22532 72 aa1.79□□□□□ -2.12
RPGRIP1-204ENST00000553927 MUC19Q7Z5P9 8384 aa1.75□□□□□ -2.13
RPGRIP1-204ENST00000553927 AHNAKQ09666 5890 aaKnown RBP1.74□□□□□ -2.13
RPGRIP1-204ENST00000553927 KRTAP5-2Q701N4 177 aa1.73□□□□□ -2.13
RPGRIP1-204ENST00000553927 KRTAP5-7Q6L8G8 165 aa1.71□□□□□ -2.14
RPGRIP1-204ENST00000553927 KRTAP5-8O75690 187 aa1.63□□□□□ -2.15
RPGRIP1-204ENST00000553927 AHNAK2Q8IVF2 5795 aa1.61□□□□□ -2.15
RPGRIP1-204ENST00000553927 KRTAP5-10Q6L8G5 202 aa1.57□□□□□ -2.16
RPGRIP1-204ENST00000553927 MT4P47944 62 aa1.55□□□□□ -2.16
RPGRIP1-204ENST00000553927 MUC5ACP98088 5654 aa1.5□□□□□ -2.17
RPGRIP1-204ENST00000553927 LCE1CQ5T751 118 aa1.49□□□□□ -2.17
RPGRIP1-204ENST00000553927 LCE1BQ5T7P3 118 aa1.49□□□□□ -2.17
RPGRIP1-204ENST00000553927 KRTAP20-2Q3LI61 65 aa1.42□□□□□ -2.18
RPGRIP1-204ENST00000553927 KRTAP21-1Q3LI58 79 aa1.22□□□□□ -2.21
RPGRIP1-204ENST00000553927 KRTAP21-2Q3LI59 83 aa1.2□□□□□ -2.22
RPGRIP1-204ENST00000553927 PHGR1C9JFL3 82 aa0.92□□□□□ -2.26
RPGRIP1-204ENST00000553927 MUC16Q8WXI7 14507 aa0.62□□□□□ -2.31
Retrieved 78 of 20,778 RNA–protein pairs in 333.9 ms