RNA–Protein interactions for RNA: ENST00000553830.1

PRKCH-206, Transcript of protein kinase C eta, humanhuman

TSL 5

Gene PRKCH, Length 514 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-206ENST00000553830 SPRR2AP35326 72 aa5.12□□□□□ -1.59
PRKCH-206ENST00000553830 LCE1AQ5T7P2 110 aa5.06□□□□□ -1.6
PRKCH-206ENST00000553830 NEBP20929 6669 aa5.06□□□□□ -1.6
PRKCH-206ENST00000553830 MT1LQ93083 61 aa5.05□□□□□ -1.6
PRKCH-206ENST00000553830 MUC12Q9UKN1 5478 aa5.04□□□□□ -1.6
PRKCH-206ENST00000553830 KRTAP15-1Q3LI76 137 aa5.02□□□□□ -1.61
PRKCH-206ENST00000553830 KRTAP19-3Q7Z4W3 81 aa5.02□□□□□ -1.61
PRKCH-206ENST00000553830 MT1GP13640 62 aa4.94□□□□□ -1.62
PRKCH-206ENST00000553830 SPRR2DP22532 72 aa4.94□□□□□ -1.62
PRKCH-206ENST00000553830 LCE5AQ5TCM9 118 aa4.94□□□□□ -1.62
PRKCH-206ENST00000553830 KRTAP20-1Q3LI63 56 aa4.93□□□□□ -1.62
PRKCH-206ENST00000553830 MT1MQ8N339 61 aa4.9□□□□□ -1.63
PRKCH-206ENST00000553830 KRTAP4-7Q9BYR0 210 aa4.89□□□□□ -1.63
PRKCH-206ENST00000553830 MDN1Q9NU22 5596 aa4.89□□□□□ -1.63
PRKCH-206ENST00000553830 KRTAP4-3Q9BYR4 195 aa4.84□□□□□ -1.63
PRKCH-206ENST00000553830 LCE3CQ5T5A8 94 aa4.83□□□□□ -1.64
PRKCH-206ENST00000553830 KRTAP19-4Q3LI73 84 aa4.77□□□□□ -1.65
PRKCH-206ENST00000553830 LCE3BQ5TA77 95 aa4.74□□□□□ -1.65
PRKCH-206ENST00000553830 KRTAP2-3P0C7H8 128 aa4.69□□□□□ -1.66
PRKCH-206ENST00000553830 KRTAP2-4Q9BYR9 128 aa4.69□□□□□ -1.66
PRKCH-206ENST00000553830 LOC100996750A0A140TA64 210 aa4.61□□□□□ -1.67
PRKCH-206ENST00000553830 KRTAP2-2Q9BYT5 123 aa4.57□□□□□ -1.68
PRKCH-206ENST00000553830 KRTAP2-1Q9BYU5 128 aa4.57□□□□□ -1.68
PRKCH-206ENST00000553830 GPR98Q8WXG9 6306 aa4.56□□□□□ -1.68
PRKCH-206ENST00000553830 KRTAP9-6A8MVA2 160 aa4.56□□□□□ -1.68
PRKCH-206ENST00000553830 DSTQ03001 7570 aaKnown RBP4.55□□□□□ -1.68
PRKCH-206ENST00000553830 SPRR5A0A1B0GTR4 108 aa4.5□□□□□ -1.69
PRKCH-206ENST00000553830 KRTAP5-5Q701N2 237 aaPredicted RBP4.39□□□□□ -1.71
PRKCH-206ENST00000553830 LCE4AQ5TA78 99 aa4.32□□□□□ -1.72
PRKCH-206ENST00000553830 KRTAP4-9Q9BYQ8 210 aa4.32□□□□□ -1.72
PRKCH-206ENST00000553830 MT4P47944 62 aa4.31□□□□□ -1.72
PRKCH-206ENST00000553830 KRTAP5-4Q6L8H1 288 aa4.31□□□□□ -1.72
PRKCH-206ENST00000553830 LUZP6Q538Z0 58 aa4.3□□□□□ -1.72
PRKCH-206ENST00000553830 MT1AP04731 61 aa4.28□□□□□ -1.72
PRKCH-206ENST00000553830 KRTAP6-1Q3LI64 71 aa4.26□□□□□ -1.73
PRKCH-206ENST00000553830 LCE1DQ5T752 114 aa4.23□□□□□ -1.73
PRKCH-206ENST00000553830 KRTAP4-6Q9BYQ5 205 aa4.2□□□□□ -1.74
PRKCH-206ENST00000553830 KRTAP12-4P60329 112 aa4.19□□□□□ -1.74
PRKCH-206ENST00000553830 SYNE1Q8NF91 8797 aaKnown RBP4.15□□□□□ -1.75
PRKCH-206ENST00000553830 KRTAP20-2Q3LI61 65 aa4.08□□□□□ -1.76
PRKCH-206ENST00000553830 KRTAP9-4Q9BYQ2 154 aa4.08□□□□□ -1.76
PRKCH-206ENST00000553830 NDUFAF8A1L188 74 aa4.04□□□□□ -1.76
PRKCH-206ENST00000553830 HMCN1Q96RW7 5635 aa4.01□□□□□ -1.77
PRKCH-206ENST00000553830 H3BS24 57 aa3.99□□□□□ -1.77
PRKCH-206ENST00000553830 AHNAK2Q8IVF2 5795 aa3.99□□□□□ -1.77
PRKCH-206ENST00000553830 KRTAP6-2Q3LI66 62 aa3.98□□□□□ -1.77
PRKCH-206ENST00000553830 KRTAP5-10Q6L8G5 202 aa3.95□□□□□ -1.78
PRKCH-206ENST00000553830 KRTAP5-3Q6L8H2 238 aa3.91□□□□□ -1.78
PRKCH-206ENST00000553830 MT3P25713 68 aa3.89□□□□□ -1.79
PRKCH-206ENST00000553830 KRTAP5-2Q701N4 177 aa3.87□□□□□ -1.79
PRKCH-206ENST00000553830 KRTAP5-7Q6L8G8 165 aa3.86□□□□□ -1.79
PRKCH-206ENST00000553830 KRTAP4-11Q9BYQ6 195 aa3.6□□□□□ -1.83
PRKCH-206ENST00000553830 LCE3DQ9BYE3 92 aa3.58□□□□□ -1.84
PRKCH-206ENST00000553830 OBSCNQ5VST9 7968 aa3.52□□□□□ -1.85
PRKCH-206ENST00000553830 AHNAKQ09666 5890 aaKnown RBP3.48□□□□□ -1.85
PRKCH-206ENST00000553830 KRTAP5-8O75690 187 aa3.46□□□□□ -1.86
PRKCH-206ENST00000553830 LCE3EQ5T5B0 92 aa3.46□□□□□ -1.86
PRKCH-206ENST00000553830 A0A0A0MQY5 61 aa3.45□□□□□ -1.86
PRKCH-206ENST00000553830 MUC5ACP98088 5654 aa3.41□□□□□ -1.86
PRKCH-206ENST00000553830 KRTAP5-1Q6L8H4 278 aa3.39□□□□□ -1.87
PRKCH-206ENST00000553830 LCE1EQ5T753 118 aa3.38□□□□□ -1.87
PRKCH-206ENST00000553830 MUC5BQ9HC84 5762 aaPredicted RBP3.36□□□□□ -1.87
PRKCH-206ENST00000553830 LCE1BQ5T7P3 118 aa3.3□□□□□ -1.88
PRKCH-206ENST00000553830 INE1O15225 51 aa3.25□□□□□ -1.89
PRKCH-206ENST00000553830 KRTAP9-9Q9BYP9 154 aa3.21□□□□□ -1.9
PRKCH-206ENST00000553830 KRTAP4-2Q9BYR5 136 aa3.21□□□□□ -1.9
PRKCH-206ENST00000553830 LCE1CQ5T751 118 aa3.16□□□□□ -1.9
PRKCH-206ENST00000553830 PRM1P04553 51 aa2.93□□□□□ -1.94
PRKCH-206ENST00000553830 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.91□□□□□ -1.94
PRKCH-206ENST00000553830 KRTAP5-11Q6L8G4 156 aa2.82□□□□□ -1.96
PRKCH-206ENST00000553830 KRTAP4-12Q9BQ66 201 aa2.82□□□□□ -1.96
PRKCH-206ENST00000553830 KRTAP21-2Q3LI59 83 aa2.76□□□□□ -1.97
PRKCH-206ENST00000553830 LCE1FQ5T754 118 aa2.58□□□□□ -2
PRKCH-206ENST00000553830 KRTAP4-4Q9BYR3 166 aa2.56□□□□□ -2
PRKCH-206ENST00000553830 PHGR1C9JFL3 82 aa2.43□□□□□ -2.02
PRKCH-206ENST00000553830 MUC19Q7Z5P9 8384 aa2.1□□□□□ -2.07
PRKCH-206ENST00000553830 KRTAP21-1Q3LI58 79 aa1.72□□□□□ -2.13
PRKCH-206ENST00000553830 MUC16Q8WXI7 14507 aa1.59□□□□□ -2.15
Retrieved 78 of 20,778 RNA–protein pairs in 5.4 ms