RNA–Protein interactions for RNA: ENST00000553718.1

TTC8-208, Transcript of tetratricopeptide repeat domain 8, humanhuman

TSL 3

Gene TTC8, Length 479 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC8-208ENST00000553718 LCE3CQ5T5A8 94 aa3.93□□□□□ -1.78
TTC8-208ENST00000553718 MUC12Q9UKN1 5478 aa3.91□□□□□ -1.78
TTC8-208ENST00000553718 KRTAP4-8A0A0G2JLE6 195 aa3.89□□□□□ -1.79
TTC8-208ENST00000553718 KRTAP19-7Q3SYF9 63 aa3.89□□□□□ -1.79
TTC8-208ENST00000553718 KRTAP4-8Q9BYQ9 185 aa3.89□□□□□ -1.79
TTC8-208ENST00000553718 MT1EP04732 61 aa3.8□□□□□ -1.8
TTC8-208ENST00000553718 MT1LQ93083 61 aa3.78□□□□□ -1.8
TTC8-208ENST00000553718 INE1O15225 51 aa3.73□□□□□ -1.81
TTC8-208ENST00000553718 KMT2DO14686 5537 aa3.72□□□□□ -1.81
TTC8-208ENST00000553718 KRTAP2-3P0C7H8 128 aa3.72□□□□□ -1.81
TTC8-208ENST00000553718 KRTAP2-4Q9BYR9 128 aa3.72□□□□□ -1.81
TTC8-208ENST00000553718 MDN1Q9NU22 5596 aa3.72□□□□□ -1.81
TTC8-208ENST00000553718 KRTAP9-6A8MVA2 160 aa3.65□□□□□ -1.83
TTC8-208ENST00000553718 MT1GP13640 62 aa3.65□□□□□ -1.83
TTC8-208ENST00000553718 KRTAP5-9P26371 169 aa3.64□□□□□ -1.83
TTC8-208ENST00000553718 KRTAP19-3Q7Z4W3 81 aa3.62□□□□□ -1.83
TTC8-208ENST00000553718 KRTAP2-1Q9BYU5 128 aa3.61□□□□□ -1.83
TTC8-208ENST00000553718 GPR98Q8WXG9 6306 aa3.6□□□□□ -1.83
TTC8-208ENST00000553718 KRTAP4-7Q9BYR0 210 aa3.6□□□□□ -1.83
TTC8-208ENST00000553718 KRTAP2-2Q9BYT5 123 aa3.57□□□□□ -1.84
TTC8-208ENST00000553718 MT1MQ8N339 61 aa3.56□□□□□ -1.84
TTC8-208ENST00000553718 SPRR2EP22531 72 aa3.52□□□□□ -1.85
TTC8-208ENST00000553718 SPRR2BP35325 72 aa3.52□□□□□ -1.85
TTC8-208ENST00000553718 SPRR2AP35326 72 aa3.52□□□□□ -1.85
TTC8-208ENST00000553718 LCE5AQ5TCM9 118 aa3.51□□□□□ -1.85
TTC8-208ENST00000553718 SPRR2FQ96RM1 72 aa3.46□□□□□ -1.86
TTC8-208ENST00000553718 SPRR2DP22532 72 aa3.42□□□□□ -1.86
TTC8-208ENST00000553718 KRTAP4-3Q9BYR4 195 aa3.41□□□□□ -1.86
TTC8-208ENST00000553718 LCE1AQ5T7P2 110 aa3.38□□□□□ -1.87
TTC8-208ENST00000553718 LOC100996750A0A140TA64 210 aa3.36□□□□□ -1.87
TTC8-208ENST00000553718 LCE3BQ5TA77 95 aa3.35□□□□□ -1.87
TTC8-208ENST00000553718 DSTQ03001 7570 aaKnown RBP3.29□□□□□ -1.88
TTC8-208ENST00000553718 MT1AP04731 61 aa3.24□□□□□ -1.89
TTC8-208ENST00000553718 KRTAP4-9Q9BYQ8 210 aa3.24□□□□□ -1.89
TTC8-208ENST00000553718 KRTAP5-5Q701N2 237 aaPredicted RBP3.21□□□□□ -1.9
TTC8-208ENST00000553718 KRTAP4-6Q9BYQ5 205 aa3.19□□□□□ -1.9
TTC8-208ENST00000553718 AHNAK2Q8IVF2 5795 aa3.14□□□□□ -1.91
TTC8-208ENST00000553718 KRTAP6-1Q3LI64 71 aa3.14□□□□□ -1.91
TTC8-208ENST00000553718 HMCN1Q96RW7 5635 aa3.14□□□□□ -1.91
TTC8-208ENST00000553718 LCE1DQ5T752 114 aa3.1□□□□□ -1.91
TTC8-208ENST00000553718 KRTAP5-10Q6L8G5 202 aa3.1□□□□□ -1.91
TTC8-208ENST00000553718 KRTAP12-4P60329 112 aa3.08□□□□□ -1.92
TTC8-208ENST00000553718 KRTAP9-4Q9BYQ2 154 aa3.06□□□□□ -1.92
TTC8-208ENST00000553718 MT4P47944 62 aa3.03□□□□□ -1.92
TTC8-208ENST00000553718 KRTAP5-7Q6L8G8 165 aa3.03□□□□□ -1.92
TTC8-208ENST00000553718 LCE3DQ9BYE3 92 aa3□□□□□ -1.93
TTC8-208ENST00000553718 LCE3EQ5T5B0 92 aa2.98□□□□□ -1.93
TTC8-208ENST00000553718 SYNE1Q8NF91 8797 aaKnown RBP2.97□□□□□ -1.93
TTC8-208ENST00000553718 LCE4AQ5TA78 99 aa2.96□□□□□ -1.94
TTC8-208ENST00000553718 KRTAP5-4Q6L8H1 288 aa2.95□□□□□ -1.94
TTC8-208ENST00000553718 MT3P25713 68 aa2.94□□□□□ -1.94
TTC8-208ENST00000553718 KRTAP5-3Q6L8H2 238 aa2.92□□□□□ -1.94
TTC8-208ENST00000553718 KRTAP6-2Q3LI66 62 aa2.83□□□□□ -1.96
TTC8-208ENST00000553718 AHNAKQ09666 5890 aaKnown RBP2.76□□□□□ -1.97
TTC8-208ENST00000553718 KRTAP5-2Q701N4 177 aa2.72□□□□□ -1.97
TTC8-208ENST00000553718 MUC5ACP98088 5654 aa2.7□□□□□ -1.98
TTC8-208ENST00000553718 KRTAP20-2Q3LI61 65 aa2.69□□□□□ -1.98
TTC8-208ENST00000553718 PRM1P04553 51 aa2.67□□□□□ -1.98
TTC8-208ENST00000553718 MUC5BQ9HC84 5762 aaPredicted RBP2.65□□□□□ -1.99
TTC8-208ENST00000553718 OBSCNQ5VST9 7968 aa2.59□□□□□ -2
TTC8-208ENST00000553718 KRTAP9-9Q9BYP9 154 aa2.58□□□□□ -2
TTC8-208ENST00000553718 KRTAP4-11Q9BYQ6 195 aa2.57□□□□□ -2
TTC8-208ENST00000553718 KRTAP5-8O75690 187 aa2.54□□□□□ -2
TTC8-208ENST00000553718 LCE1EQ5T753 118 aa2.53□□□□□ -2
TTC8-208ENST00000553718 KRTAP4-12Q9BQ66 201 aa2.51□□□□□ -2.01
TTC8-208ENST00000553718 KRTAP4-2Q9BYR5 136 aa2.45□□□□□ -2.02
TTC8-208ENST00000553718 LCE1CQ5T751 118 aa2.33□□□□□ -2.04
TTC8-208ENST00000553718 LCE1BQ5T7P3 118 aa2.33□□□□□ -2.04
TTC8-208ENST00000553718 KRTAP5-1Q6L8H4 278 aa2.28□□□□□ -2.04
TTC8-208ENST00000553718 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.24□□□□□ -2.05
TTC8-208ENST00000553718 KRTAP21-2Q3LI59 83 aa2.08□□□□□ -2.08
TTC8-208ENST00000553718 KRTAP5-11Q6L8G4 156 aa2.02□□□□□ -2.09
TTC8-208ENST00000553718 PHGR1C9JFL3 82 aa1.86□□□□□ -2.11
TTC8-208ENST00000553718 LCE1FQ5T754 118 aa1.81□□□□□ -2.12
TTC8-208ENST00000553718 KRTAP21-1Q3LI58 79 aa1.76□□□□□ -2.13
TTC8-208ENST00000553718 KRTAP4-4Q9BYR3 166 aa1.72□□□□□ -2.13
TTC8-208ENST00000553718 MUC19Q7Z5P9 8384 aa1.49□□□□□ -2.17
TTC8-208ENST00000553718 MUC16Q8WXI7 14507 aa1.21□□□□□ -2.22
Retrieved 78 of 20,778 RNA–protein pairs in 86.1 ms