RNA–Protein interactions for RNA: ENST00000553678.1

AL049775.3-201, humanhuman

TSL 3 BASIC

Gene AL049775.3, Length 643 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AL049775.3-201ENST00000553678 C10orf95Q9H7T3 257 aa3.93□□□□□ -1.78
AL049775.3-201ENST00000553678 TMEM258P61165 79 aa3.92□□□□□ -1.78
AL049775.3-201ENST00000553678 KRTAP4-3Q9BYR4 195 aa3.92□□□□□ -1.78
AL049775.3-201ENST00000553678 A0A1B0GU69 56 aa3.91□□□□□ -1.78
AL049775.3-201ENST00000553678 KRTAP15-1Q3LI76 137 aa3.91□□□□□ -1.78
AL049775.3-201ENST00000553678 LCE3AQ5TA76 89 aa3.91□□□□□ -1.78
AL049775.3-201ENST00000553678 MT1MQ8N339 61 aa3.9□□□□□ -1.79
AL049775.3-201ENST00000553678 MT1LQ93083 61 aa3.9□□□□□ -1.79
AL049775.3-201ENST00000553678 MT1GP13640 62 aa3.89□□□□□ -1.79
AL049775.3-201ENST00000553678 ATP5EP56381 51 aaPredicted RBP3.86□□□□□ -1.79
AL049775.3-201ENST00000553678 RPS28P62857 69 aaKnown RBP3.86□□□□□ -1.79
AL049775.3-201ENST00000553678 SMIM26A0A096LP01 95 aa3.85□□□□□ -1.79
AL049775.3-201ENST00000553678 GPR98Q8WXG9 6306 aa3.81□□□□□ -1.8
AL049775.3-201ENST00000553678 HMCN1Q96RW7 5635 aa3.78□□□□□ -1.8
AL049775.3-201ENST00000553678 MT4P47944 62 aa3.78□□□□□ -1.8
AL049775.3-201ENST00000553678 PP632Q6XCG6 107 aa3.78□□□□□ -1.8
AL049775.3-201ENST00000553678 TNP1P09430 55 aa3.77□□□□□ -1.81
AL049775.3-201ENST00000553678 LINC01558Q9Y6Z2 57 aa3.77□□□□□ -1.81
AL049775.3-201ENST00000553678 KRTAP5-4Q6L8H1 288 aa3.73□□□□□ -1.81
AL049775.3-201ENST00000553678 KRTAP12-3P60328 96 aa3.7□□□□□ -1.82
AL049775.3-201ENST00000553678 AHNAK2Q8IVF2 5795 aa3.7□□□□□ -1.82
AL049775.3-201ENST00000553678 PRR15LQ9BU68 103 aa3.69□□□□□ -1.82
AL049775.3-201ENST00000553678 Q1T7F1 81 aa3.63□□□□□ -1.83
AL049775.3-201ENST00000553678 KRTAP5-3Q6L8H2 238 aa3.63□□□□□ -1.83
AL049775.3-201ENST00000553678 UQCR11O14957 56 aa3.62□□□□□ -1.83
AL049775.3-201ENST00000553678 V9GYY9 64 aa3.62□□□□□ -1.83
AL049775.3-201ENST00000553678 KRTAP5-5Q701N2 237 aaPredicted RBP3.6□□□□□ -1.83
AL049775.3-201ENST00000553678 MIR22HGQ0VDD5 57 aa3.58□□□□□ -1.84
AL049775.3-201ENST00000553678 KRTAP5-10Q6L8G5 202 aa3.58□□□□□ -1.84
AL049775.3-201ENST00000553678 PSPHP1O15172 72 aa3.55□□□□□ -1.84
AL049775.3-201ENST00000553678 KRTAP25-1Q3LHN0 102 aa3.53□□□□□ -1.84
AL049775.3-201ENST00000553678 KRTAP20-2Q3LI61 65 aa3.53□□□□□ -1.84
AL049775.3-201ENST00000553678 SYNE1Q8NF91 8797 aaKnown RBP3.45□□□□□ -1.86
AL049775.3-201ENST00000553678 SPRR5A0A1B0GTR4 108 aa3.43□□□□□ -1.86
AL049775.3-201ENST00000553678 PRO0628Q9UI54 55 aa3.42□□□□□ -1.86
AL049775.3-201ENST00000553678 LCE3CQ5T5A8 94 aa3.41□□□□□ -1.86
AL049775.3-201ENST00000553678 A0A0A0MQY5 61 aa3.4□□□□□ -1.87
AL049775.3-201ENST00000553678 KRTAP5-7Q6L8G8 165 aa3.4□□□□□ -1.87
AL049775.3-201ENST00000553678 K7ERS5 55 aa3.38□□□□□ -1.87
AL049775.3-201ENST00000553678 KRTAP12-4P60329 112 aa3.38□□□□□ -1.87
AL049775.3-201ENST00000553678 BRK1Q8WUW1 75 aa3.38□□□□□ -1.87
AL049775.3-201ENST00000553678 CDC42SE1Q9NRR8 79 aa3.38□□□□□ -1.87
AL049775.3-201ENST00000553678 A6NED7 52 aa3.37□□□□□ -1.87
AL049775.3-201ENST00000553678 KRTAP9-6A8MVA2 160 aa3.35□□□□□ -1.87
AL049775.3-201ENST00000553678 KRTAP6-1Q3LI64 71 aa3.34□□□□□ -1.87
AL049775.3-201ENST00000553678 MT1AP04731 61 aa3.29□□□□□ -1.88
AL049775.3-201ENST00000553678 ROMO1P60602 79 aa3.27□□□□□ -1.89
AL049775.3-201ENST00000553678 KRTAP5-2Q701N4 177 aa3.27□□□□□ -1.89
AL049775.3-201ENST00000553678 PMAIP1Q13794 54 aa3.22□□□□□ -1.89
AL049775.3-201ENST00000553678 KRTAP6-2Q3LI66 62 aa3.17□□□□□ -1.9
AL049775.3-201ENST00000553678 KTN1-AS1Q86SY8 53 aa3.15□□□□□ -1.91
AL049775.3-201ENST00000553678 KRTAP5-8O75690 187 aa3.14□□□□□ -1.91
AL049775.3-201ENST00000553678 OBSCNQ5VST9 7968 aa3.06□□□□□ -1.92
AL049775.3-201ENST00000553678 AHNAKQ09666 5890 aaKnown RBP3.01□□□□□ -1.93
AL049775.3-201ENST00000553678 MUC5BQ9HC84 5762 aaPredicted RBP3.01□□□□□ -1.93
AL049775.3-201ENST00000553678 MUC5ACP98088 5654 aa3□□□□□ -1.93
AL049775.3-201ENST00000553678 MT3P25713 68 aa2.96□□□□□ -1.94
AL049775.3-201ENST00000553678 KRTAP5-1Q6L8H4 278 aa2.96□□□□□ -1.94
AL049775.3-201ENST00000553678 PRAC1Q96KF2 57 aa2.96□□□□□ -1.94
AL049775.3-201ENST00000553678 LCE1FQ5T754 118 aa2.84□□□□□ -1.95
AL049775.3-201ENST00000553678 KRTAP5-11Q6L8G4 156 aa2.8□□□□□ -1.96
AL049775.3-201ENST00000553678 LCE1EQ5T753 118 aa2.76□□□□□ -1.97
AL049775.3-201ENST00000553678 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.68□□□□□ -1.98
AL049775.3-201ENST00000553678 LCE1BQ5T7P3 118 aa2.63□□□□□ -1.99
AL049775.3-201ENST00000553678 NDUFAF8A1L188 74 aa2.59□□□□□ -1.99
AL049775.3-201ENST00000553678 LCE1CQ5T751 118 aa2.54□□□□□ -2
AL049775.3-201ENST00000553678 LUZP6Q538Z0 58 aa2.44□□□□□ -2.02
AL049775.3-201ENST00000553678 LCE3DQ9BYE3 92 aa2.41□□□□□ -2.02
AL049775.3-201ENST00000553678 LCE3EQ5T5B0 92 aa2.4□□□□□ -2.03
AL049775.3-201ENST00000553678 KRTAP4-4Q9BYR3 166 aa2.22□□□□□ -2.05
AL049775.3-201ENST00000553678 KRTAP21-2Q3LI59 83 aa2.2□□□□□ -2.06
AL049775.3-201ENST00000553678 INE1O15225 51 aa2.08□□□□□ -2.08
AL049775.3-201ENST00000553678 PHGR1C9JFL3 82 aa2.06□□□□□ -2.08
AL049775.3-201ENST00000553678 MUC19Q7Z5P9 8384 aa1.87□□□□□ -2.11
AL049775.3-201ENST00000553678 PRM1P04553 51 aa1.72□□□□□ -2.13
AL049775.3-201ENST00000553678 KRTAP21-1Q3LI58 79 aa1.52□□□□□ -2.17
AL049775.3-201ENST00000553678 MUC16Q8WXI7 14507 aa1.39□□□□□ -2.19
Retrieved 77 of 20,778 RNA–protein pairs in 48 ms