RNA–Protein interactions for RNA: ENST00000553656.5

TUBB3-202, Transcript of tubulin beta 3 class III, humanhuman

TSL 4

Gene TUBB3, Length 550 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-202ENST00000553656 ROMO1P60602 79 aa5.07□□□□□ -1.6
TUBB3-202ENST00000553656 KRTAP19-3Q7Z4W3 81 aa5.03□□□□□ -1.6
TUBB3-202ENST00000553656 KRTAP2-3P0C7H8 128 aa5.02□□□□□ -1.61
TUBB3-202ENST00000553656 KRTAP2-4Q9BYR9 128 aa5.02□□□□□ -1.61
TUBB3-202ENST00000553656 KTN1-AS1Q86SY8 53 aa5.01□□□□□ -1.61
TUBB3-202ENST00000553656 KRTAP12-3P60328 96 aa5□□□□□ -1.61
TUBB3-202ENST00000553656 KRTAP23-1A1A580 65 aa4.98□□□□□ -1.61
TUBB3-202ENST00000553656 LCE5AQ5TCM9 118 aa4.98□□□□□ -1.61
TUBB3-202ENST00000553656 MT1GP13640 62 aa4.95□□□□□ -1.62
TUBB3-202ENST00000553656 PP632Q6XCG6 107 aa4.95□□□□□ -1.62
TUBB3-202ENST00000553656 MT1LQ93083 61 aa4.94□□□□□ -1.62
TUBB3-202ENST00000553656 LCE3BQ5TA77 95 aa4.91□□□□□ -1.62
TUBB3-202ENST00000553656 PRAC1Q96KF2 57 aa4.9□□□□□ -1.63
TUBB3-202ENST00000553656 SVIPQ8NHG7 77 aa4.88□□□□□ -1.63
TUBB3-202ENST00000553656 KRTAP2-2Q9BYT5 123 aa4.88□□□□□ -1.63
TUBB3-202ENST00000553656 KRTAP2-1Q9BYU5 128 aa4.88□□□□□ -1.63
TUBB3-202ENST00000553656 MT1MQ8N339 61 aa4.85□□□□□ -1.63
TUBB3-202ENST00000553656 DSTQ03001 7570 aaKnown RBP4.78□□□□□ -1.64
TUBB3-202ENST00000553656 KRTAP15-1Q3LI76 137 aa4.77□□□□□ -1.65
TUBB3-202ENST00000553656 KRTAP19-4Q3LI73 84 aa4.73□□□□□ -1.65
TUBB3-202ENST00000553656 KRTAP4-3Q9BYR4 195 aa4.71□□□□□ -1.66
TUBB3-202ENST00000553656 KRTAP4-7Q9BYR0 210 aa4.69□□□□□ -1.66
TUBB3-202ENST00000553656 LCE3CQ5T5A8 94 aa4.61□□□□□ -1.67
TUBB3-202ENST00000553656 LCE4AQ5TA78 99 aa4.51□□□□□ -1.69
TUBB3-202ENST00000553656 KRTAP4-9Q9BYQ8 210 aa4.47□□□□□ -1.69
TUBB3-202ENST00000553656 LOC100996750A0A140TA64 210 aa4.44□□□□□ -1.7
TUBB3-202ENST00000553656 KRTAP5-4Q6L8H1 288 aa4.43□□□□□ -1.7
TUBB3-202ENST00000553656 MT4P47944 62 aa4.42□□□□□ -1.7
TUBB3-202ENST00000553656 LCE1DQ5T752 114 aa4.41□□□□□ -1.7
TUBB3-202ENST00000553656 KRTAP5-5Q701N2 237 aaPredicted RBP4.4□□□□□ -1.71
TUBB3-202ENST00000553656 KRTAP9-6A8MVA2 160 aa4.29□□□□□ -1.72
TUBB3-202ENST00000553656 KRTAP12-4P60329 112 aa4.28□□□□□ -1.72
TUBB3-202ENST00000553656 KRTAP4-6Q9BYQ5 205 aa4.28□□□□□ -1.72
TUBB3-202ENST00000553656 HMCN1Q96RW7 5635 aa4.27□□□□□ -1.73
TUBB3-202ENST00000553656 MT1AP04731 61 aa4.22□□□□□ -1.73
TUBB3-202ENST00000553656 SPRR5A0A1B0GTR4 108 aa4.2□□□□□ -1.74
TUBB3-202ENST00000553656 KRTAP20-2Q3LI61 65 aa4.18□□□□□ -1.74
TUBB3-202ENST00000553656 SYNE1Q8NF91 8797 aaKnown RBP4.17□□□□□ -1.74
TUBB3-202ENST00000553656 KRTAP6-1Q3LI64 71 aa4.16□□□□□ -1.74
TUBB3-202ENST00000553656 GPR98Q8WXG9 6306 aa4.14□□□□□ -1.75
TUBB3-202ENST00000553656 KRTAP9-4Q9BYQ2 154 aa4.04□□□□□ -1.76
TUBB3-202ENST00000553656 KRTAP5-3Q6L8H2 238 aa4.02□□□□□ -1.77
TUBB3-202ENST00000553656 AHNAK2Q8IVF2 5795 aa4.01□□□□□ -1.77
TUBB3-202ENST00000553656 LUZP6Q538Z0 58 aa3.99□□□□□ -1.77
TUBB3-202ENST00000553656 KRTAP6-2Q3LI66 62 aa3.93□□□□□ -1.78
TUBB3-202ENST00000553656 KRTAP5-2Q701N4 177 aa3.93□□□□□ -1.78
TUBB3-202ENST00000553656 KRTAP5-10Q6L8G5 202 aa3.92□□□□□ -1.78
TUBB3-202ENST00000553656 NDUFAF8A1L188 74 aa3.88□□□□□ -1.79
TUBB3-202ENST00000553656 MT3P25713 68 aa3.86□□□□□ -1.79
TUBB3-202ENST00000553656 KRTAP4-11Q9BYQ6 195 aa3.75□□□□□ -1.81
TUBB3-202ENST00000553656 KRTAP5-7Q6L8G8 165 aa3.74□□□□□ -1.81
TUBB3-202ENST00000553656 OBSCNQ5VST9 7968 aa3.65□□□□□ -1.83
TUBB3-202ENST00000553656 KRTAP5-8O75690 187 aa3.6□□□□□ -1.83
TUBB3-202ENST00000553656 KRTAP5-1Q6L8H4 278 aa3.47□□□□□ -1.85
TUBB3-202ENST00000553656 LCE1EQ5T753 118 aa3.46□□□□□ -1.86
TUBB3-202ENST00000553656 KRTAP9-9Q9BYP9 154 aa3.42□□□□□ -1.86
TUBB3-202ENST00000553656 A0A0A0MQY5 61 aa3.41□□□□□ -1.86
TUBB3-202ENST00000553656 LCE3DQ9BYE3 92 aa3.4□□□□□ -1.87
TUBB3-202ENST00000553656 H3BS24 57 aa3.38□□□□□ -1.87
TUBB3-202ENST00000553656 MUC5ACP98088 5654 aa3.35□□□□□ -1.87
TUBB3-202ENST00000553656 LCE1BQ5T7P3 118 aa3.27□□□□□ -1.89
TUBB3-202ENST00000553656 LCE3EQ5T5B0 92 aa3.25□□□□□ -1.89
TUBB3-202ENST00000553656 AHNAKQ09666 5890 aaKnown RBP3.22□□□□□ -1.89
TUBB3-202ENST00000553656 MUC5BQ9HC84 5762 aaPredicted RBP3.22□□□□□ -1.89
TUBB3-202ENST00000553656 KRTAP4-2Q9BYR5 136 aa3.22□□□□□ -1.89
TUBB3-202ENST00000553656 INE1O15225 51 aa3.21□□□□□ -1.9
TUBB3-202ENST00000553656 LCE1CQ5T751 118 aa3.2□□□□□ -1.9
TUBB3-202ENST00000553656 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.94□□□□□ -1.94
TUBB3-202ENST00000553656 KRTAP5-11Q6L8G4 156 aa2.88□□□□□ -1.95
TUBB3-202ENST00000553656 KRTAP4-12Q9BQ66 201 aa2.82□□□□□ -1.96
TUBB3-202ENST00000553656 LCE1FQ5T754 118 aa2.74□□□□□ -1.97
TUBB3-202ENST00000553656 KRTAP21-2Q3LI59 83 aa2.72□□□□□ -1.97
TUBB3-202ENST00000553656 PRM1P04553 51 aa2.63□□□□□ -1.99
TUBB3-202ENST00000553656 PHGR1C9JFL3 82 aa2.48□□□□□ -2.01
TUBB3-202ENST00000553656 KRTAP4-4Q9BYR3 166 aa2.47□□□□□ -2.01
TUBB3-202ENST00000553656 MUC19Q7Z5P9 8384 aa2.23□□□□□ -2.05
TUBB3-202ENST00000553656 KRTAP21-1Q3LI58 79 aa1.75□□□□□ -2.13
TUBB3-202ENST00000553656 MUC16Q8WXI7 14507 aa1.6□□□□□ -2.15
Retrieved 78 of 20,778 RNA–protein pairs in 191 ms