RNA–Protein interactions for RNA: ENST00000553599.5

PSEN1-207, Transcript of presenilin 1, humanhuman

TSL 4

Gene PSEN1, Length 591 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-207ENST00000553599 MDN1Q9NU22 5596 aa7.09□□□□□ -1.27
PSEN1-207ENST00000553599 KRTAP12-3P60328 96 aa7.05□□□□□ -1.28
PSEN1-207ENST00000553599 KRTAP19-3Q7Z4W3 81 aa6.97□□□□□ -1.29
PSEN1-207ENST00000553599 KRTAP20-1Q3LI63 56 aa6.91□□□□□ -1.3
PSEN1-207ENST00000553599 LCE5AQ5TCM9 118 aa6.91□□□□□ -1.3
PSEN1-207ENST00000553599 MT1LQ93083 61 aa6.91□□□□□ -1.3
PSEN1-207ENST00000553599 MT1GP13640 62 aa6.9□□□□□ -1.3
PSEN1-207ENST00000553599 SPRR2DP22532 72 aa6.87□□□□□ -1.31
PSEN1-207ENST00000553599 KRTAP19-4Q3LI73 84 aa6.82□□□□□ -1.32
PSEN1-207ENST00000553599 KRTAP15-1Q3LI76 137 aa6.79□□□□□ -1.32
PSEN1-207ENST00000553599 KRTAP2-3P0C7H8 128 aa6.78□□□□□ -1.32
PSEN1-207ENST00000553599 KRTAP2-4Q9BYR9 128 aa6.78□□□□□ -1.32
PSEN1-207ENST00000553599 MT1MQ8N339 61 aa6.74□□□□□ -1.33
PSEN1-207ENST00000553599 KTN1-AS1Q86SY8 53 aa6.65□□□□□ -1.34
PSEN1-207ENST00000553599 LCE3BQ5TA77 95 aa6.64□□□□□ -1.35
PSEN1-207ENST00000553599 PRAC1Q96KF2 57 aa6.63□□□□□ -1.35
PSEN1-207ENST00000553599 KRTAP2-2Q9BYT5 123 aa6.58□□□□□ -1.36
PSEN1-207ENST00000553599 KRTAP2-1Q9BYU5 128 aa6.58□□□□□ -1.36
PSEN1-207ENST00000553599 LCE3CQ5T5A8 94 aa6.55□□□□□ -1.36
PSEN1-207ENST00000553599 KRTAP4-7Q9BYR0 210 aa6.53□□□□□ -1.36
PSEN1-207ENST00000553599 DSTQ03001 7570 aaKnown RBP6.5□□□□□ -1.37
PSEN1-207ENST00000553599 KRTAP4-3Q9BYR4 195 aa6.5□□□□□ -1.37
PSEN1-207ENST00000553599 SVIPQ8NHG7 77 aa6.26□□□□□ -1.41
PSEN1-207ENST00000553599 LOC100996750A0A140TA64 210 aa6.16□□□□□ -1.42
PSEN1-207ENST00000553599 LCE4AQ5TA78 99 aa6.15□□□□□ -1.42
PSEN1-207ENST00000553599 KRTAP5-5Q701N2 237 aaPredicted RBP6.14□□□□□ -1.43
PSEN1-207ENST00000553599 KRTAP5-4Q6L8H1 288 aa6.13□□□□□ -1.43
PSEN1-207ENST00000553599 KRTAP9-6A8MVA2 160 aa6.11□□□□□ -1.43
PSEN1-207ENST00000553599 SPRR5A0A1B0GTR4 108 aa6.03□□□□□ -1.44
PSEN1-207ENST00000553599 KRTAP4-9Q9BYQ8 210 aa5.97□□□□□ -1.45
PSEN1-207ENST00000553599 LCE1DQ5T752 114 aa5.94□□□□□ -1.46
PSEN1-207ENST00000553599 MT4P47944 62 aa5.92□□□□□ -1.46
PSEN1-207ENST00000553599 MT1AP04731 61 aa5.91□□□□□ -1.46
PSEN1-207ENST00000553599 KRTAP12-4P60329 112 aa5.88□□□□□ -1.47
PSEN1-207ENST00000553599 HMCN1Q96RW7 5635 aa5.83□□□□□ -1.48
PSEN1-207ENST00000553599 KRTAP4-6Q9BYQ5 205 aa5.82□□□□□ -1.48
PSEN1-207ENST00000553599 KRTAP6-1Q3LI64 71 aa5.8□□□□□ -1.48
PSEN1-207ENST00000553599 SYNE1Q8NF91 8797 aaKnown RBP5.79□□□□□ -1.48
PSEN1-207ENST00000553599 GPR98Q8WXG9 6306 aa5.75□□□□□ -1.49
PSEN1-207ENST00000553599 KRTAP20-2Q3LI61 65 aa5.72□□□□□ -1.49
PSEN1-207ENST00000553599 KRTAP9-4Q9BYQ2 154 aa5.65□□□□□ -1.5
PSEN1-207ENST00000553599 LUZP6Q538Z0 58 aa5.61□□□□□ -1.51
PSEN1-207ENST00000553599 KRTAP5-3Q6L8H2 238 aa5.54□□□□□ -1.52
PSEN1-207ENST00000553599 AHNAK2Q8IVF2 5795 aa5.51□□□□□ -1.53
PSEN1-207ENST00000553599 KRTAP5-2Q701N4 177 aa5.47□□□□□ -1.53
PSEN1-207ENST00000553599 KRTAP6-2Q3LI66 62 aa5.44□□□□□ -1.54
PSEN1-207ENST00000553599 MT3P25713 68 aa5.4□□□□□ -1.54
PSEN1-207ENST00000553599 KRTAP5-10Q6L8G5 202 aa5.36□□□□□ -1.55
PSEN1-207ENST00000553599 KRTAP5-7Q6L8G8 165 aa5.16□□□□□ -1.58
PSEN1-207ENST00000553599 KRTAP4-11Q9BYQ6 195 aa5.09□□□□□ -1.59
PSEN1-207ENST00000553599 NDUFAF8A1L188 74 aa5.02□□□□□ -1.61
PSEN1-207ENST00000553599 H3BS24 57 aa4.98□□□□□ -1.61
PSEN1-207ENST00000553599 OBSCNQ5VST9 7968 aa4.93□□□□□ -1.62
PSEN1-207ENST00000553599 KRTAP5-8O75690 187 aa4.9□□□□□ -1.63
PSEN1-207ENST00000553599 LCE3DQ9BYE3 92 aa4.85□□□□□ -1.63
PSEN1-207ENST00000553599 LCE1EQ5T753 118 aa4.84□□□□□ -1.63
PSEN1-207ENST00000553599 KRTAP5-1Q6L8H4 278 aa4.78□□□□□ -1.64
PSEN1-207ENST00000553599 LCE3EQ5T5B0 92 aa4.66□□□□□ -1.66
PSEN1-207ENST00000553599 MUC5ACP98088 5654 aa4.61□□□□□ -1.67
PSEN1-207ENST00000553599 KRTAP9-9Q9BYP9 154 aa4.58□□□□□ -1.68
PSEN1-207ENST00000553599 MUC5BQ9HC84 5762 aaPredicted RBP4.52□□□□□ -1.69
PSEN1-207ENST00000553599 AHNAKQ09666 5890 aaKnown RBP4.48□□□□□ -1.69
PSEN1-207ENST00000553599 LCE1CQ5T751 118 aa4.48□□□□□ -1.69
PSEN1-207ENST00000553599 LCE1BQ5T7P3 118 aa4.48□□□□□ -1.69
PSEN1-207ENST00000553599 KRTAP4-2Q9BYR5 136 aa4.46□□□□□ -1.7
PSEN1-207ENST00000553599 KRTAP4-12Q9BQ66 201 aa4.37□□□□□ -1.71
PSEN1-207ENST00000553599 A0A0A0MQY5 61 aa4.35□□□□□ -1.71
PSEN1-207ENST00000553599 INE1O15225 51 aa4.22□□□□□ -1.73
PSEN1-207ENST00000553599 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.16□□□□□ -1.74
PSEN1-207ENST00000553599 KRTAP5-11Q6L8G4 156 aa4□□□□□ -1.77
PSEN1-207ENST00000553599 KRTAP21-2Q3LI59 83 aa3.83□□□□□ -1.8
PSEN1-207ENST00000553599 LCE1FQ5T754 118 aa3.79□□□□□ -1.8
PSEN1-207ENST00000553599 PRM1P04553 51 aa3.78□□□□□ -1.8
PSEN1-207ENST00000553599 PHGR1C9JFL3 82 aa3.42□□□□□ -1.86
PSEN1-207ENST00000553599 KRTAP4-4Q9BYR3 166 aa3.36□□□□□ -1.87
PSEN1-207ENST00000553599 MUC19Q7Z5P9 8384 aa3.01□□□□□ -1.93
PSEN1-207ENST00000553599 KRTAP21-1Q3LI58 79 aa2.41□□□□□ -2.02
PSEN1-207ENST00000553599 MUC16Q8WXI7 14507 aa2.19□□□□□ -2.06
Retrieved 78 of 20,778 RNA–protein pairs in 80.9 ms