RNA–Protein interactions for RNA: ENST00000553546.1

SDR39U1-205, Transcript of short chain dehydrogenase/reductase family 39U member 1, humanhuman

TSL 2

Gene SDR39U1, Length 648 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDR39U1-205ENST00000553546 V9GYY9 64 aa5.41□□□□□ -1.54
SDR39U1-205ENST00000553546 LCE4AQ5TA78 99 aa5.39□□□□□ -1.55
SDR39U1-205ENST00000553546 KRTAP5-7Q6L8G8 165 aa5.39□□□□□ -1.55
SDR39U1-205ENST00000553546 RPS28P62857 69 aaKnown RBP5.38□□□□□ -1.55
SDR39U1-205ENST00000553546 MT1MQ8N339 61 aa5.38□□□□□ -1.55
SDR39U1-205ENST00000553546 MT1LQ93083 61 aa5.38□□□□□ -1.55
SDR39U1-205ENST00000553546 A8MU10 97 aa5.37□□□□□ -1.55
SDR39U1-205ENST00000553546 PSPHP1O15172 72 aa5.37□□□□□ -1.55
SDR39U1-205ENST00000553546 TNP1P09430 55 aa5.36□□□□□ -1.55
SDR39U1-205ENST00000553546 Q1T7F1 81 aa5.36□□□□□ -1.55
SDR39U1-205ENST00000553546 LCE3AQ5TA76 89 aa5.33□□□□□ -1.56
SDR39U1-205ENST00000553546 C10orf95Q9H7T3 257 aa5.32□□□□□ -1.56
SDR39U1-205ENST00000553546 UQCR11O14957 56 aa5.3□□□□□ -1.56
SDR39U1-205ENST00000553546 KRTAP5-3Q6L8H2 238 aa5.26□□□□□ -1.57
SDR39U1-205ENST00000553546 KRTAP4-6Q9BYQ5 205 aa5.25□□□□□ -1.57
SDR39U1-205ENST00000553546 MIR22HGQ0VDD5 57 aa5.24□□□□□ -1.57
SDR39U1-205ENST00000553546 A6NED7 52 aa5.23□□□□□ -1.57
SDR39U1-205ENST00000553546 KRTAP5-4Q6L8H1 288 aa5.21□□□□□ -1.58
SDR39U1-205ENST00000553546 KRTAP4-3Q9BYR4 195 aa5.21□□□□□ -1.58
SDR39U1-205ENST00000553546 SPRR5A0A1B0GTR4 108 aa5.2□□□□□ -1.58
SDR39U1-205ENST00000553546 KRTAP12-3P60328 96 aa5.14□□□□□ -1.59
SDR39U1-205ENST00000553546 K7ERS5 55 aa5.1□□□□□ -1.59
SDR39U1-205ENST00000553546 KRTAP4-7Q9BYR0 210 aa5.05□□□□□ -1.6
SDR39U1-205ENST00000553546 CDC42SE1Q9NRR8 79 aa5.02□□□□□ -1.61
SDR39U1-205ENST00000553546 KRTAP25-1Q3LHN0 102 aa5.01□□□□□ -1.61
SDR39U1-205ENST00000553546 KRTAP20-2Q3LI61 65 aa4.97□□□□□ -1.61
SDR39U1-205ENST00000553546 KRTAP5-5Q701N2 237 aaPredicted RBP4.94□□□□□ -1.62
SDR39U1-205ENST00000553546 KRTAP19-4Q3LI73 84 aa4.92□□□□□ -1.62
SDR39U1-205ENST00000553546 BRK1Q8WUW1 75 aa4.92□□□□□ -1.62
SDR39U1-205ENST00000553546 KRTAP12-4P60329 112 aa4.88□□□□□ -1.63
SDR39U1-205ENST00000553546 KRTAP23-1A1A580 65 aa4.82□□□□□ -1.64
SDR39U1-205ENST00000553546 LOC100996750A0A140TA64 210 aa4.8□□□□□ -1.64
SDR39U1-205ENST00000553546 ROMO1P60602 79 aa4.79□□□□□ -1.64
SDR39U1-205ENST00000553546 SVIPQ8NHG7 77 aa4.78□□□□□ -1.64
SDR39U1-205ENST00000553546 KRTAP15-1Q3LI76 137 aa4.77□□□□□ -1.65
SDR39U1-205ENST00000553546 SYNE1Q8NF91 8797 aaKnown RBP4.73□□□□□ -1.65
SDR39U1-205ENST00000553546 MUC5ACP98088 5654 aa4.72□□□□□ -1.65
SDR39U1-205ENST00000553546 AHNAKQ09666 5890 aaKnown RBP4.72□□□□□ -1.65
SDR39U1-205ENST00000553546 LCE3CQ5T5A8 94 aa4.72□□□□□ -1.65
SDR39U1-205ENST00000553546 KRTAP4-11Q9BYQ6 195 aa4.67□□□□□ -1.66
SDR39U1-205ENST00000553546 MUC5BQ9HC84 5762 aaPredicted RBP4.64□□□□□ -1.67
SDR39U1-205ENST00000553546 PMAIP1Q13794 54 aa4.61□□□□□ -1.67
SDR39U1-205ENST00000553546 KRTAP5-8O75690 187 aa4.59□□□□□ -1.67
SDR39U1-205ENST00000553546 MT1AP04731 61 aa4.59□□□□□ -1.67
SDR39U1-205ENST00000553546 PRO0628Q9UI54 55 aa4.57□□□□□ -1.68
SDR39U1-205ENST00000553546 KRTAP5-2Q701N4 177 aa4.54□□□□□ -1.68
SDR39U1-205ENST00000553546 KRTAP6-1Q3LI64 71 aa4.53□□□□□ -1.68
SDR39U1-205ENST00000553546 KRTAP9-4Q9BYQ2 154 aa4.43□□□□□ -1.7
SDR39U1-205ENST00000553546 OBSCNQ5VST9 7968 aa4.42□□□□□ -1.7
SDR39U1-205ENST00000553546 KRTAP9-6A8MVA2 160 aa4.41□□□□□ -1.7
SDR39U1-205ENST00000553546 PRAC1Q96KF2 57 aa4.39□□□□□ -1.71
SDR39U1-205ENST00000553546 KRTAP9-9Q9BYP9 154 aa4.37□□□□□ -1.71
SDR39U1-205ENST00000553546 KRTAP6-2Q3LI66 62 aa4.36□□□□□ -1.71
SDR39U1-205ENST00000553546 KTN1-AS1Q86SY8 53 aa4.31□□□□□ -1.72
SDR39U1-205ENST00000553546 MT3P25713 68 aa4.21□□□□□ -1.74
SDR39U1-205ENST00000553546 KRTAP5-1Q6L8H4 278 aa4.13□□□□□ -1.75
SDR39U1-205ENST00000553546 LCE1EQ5T753 118 aa3.9□□□□□ -1.79
SDR39U1-205ENST00000553546 KRTAP4-2Q9BYR5 136 aa3.66□□□□□ -1.82
SDR39U1-205ENST00000553546 LCE1BQ5T7P3 118 aa3.65□□□□□ -1.83
SDR39U1-205ENST00000553546 LUZP6Q538Z0 58 aa3.64□□□□□ -1.83
SDR39U1-205ENST00000553546 LCE1CQ5T751 118 aa3.62□□□□□ -1.83
SDR39U1-205ENST00000553546 KRTAP4-12Q9BQ66 201 aa3.47□□□□□ -1.85
SDR39U1-205ENST00000553546 LCE3DQ9BYE3 92 aa3.39□□□□□ -1.87
SDR39U1-205ENST00000553546 H3BS24 57 aa3.32□□□□□ -1.88
SDR39U1-205ENST00000553546 NDUFAF8A1L188 74 aa3.3□□□□□ -1.88
SDR39U1-205ENST00000553546 KRTAP5-11Q6L8G4 156 aa3.3□□□□□ -1.88
SDR39U1-205ENST00000553546 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.28□□□□□ -1.88
SDR39U1-205ENST00000553546 PHGR1C9JFL3 82 aa3.24□□□□□ -1.89
SDR39U1-205ENST00000553546 LCE1FQ5T754 118 aa3.24□□□□□ -1.89
SDR39U1-205ENST00000553546 LCE3EQ5T5B0 92 aa3.17□□□□□ -1.9
SDR39U1-205ENST00000553546 A0A0A0MQY5 61 aa2.99□□□□□ -1.93
SDR39U1-205ENST00000553546 KRTAP21-2Q3LI59 83 aa2.99□□□□□ -1.93
SDR39U1-205ENST00000553546 MUC19Q7Z5P9 8384 aa2.75□□□□□ -1.97
SDR39U1-205ENST00000553546 KRTAP4-4Q9BYR3 166 aa2.73□□□□□ -1.97
SDR39U1-205ENST00000553546 INE1O15225 51 aa2.72□□□□□ -1.97
SDR39U1-205ENST00000553546 PRM1P04553 51 aa2.5□□□□□ -2.01
SDR39U1-205ENST00000553546 KRTAP21-1Q3LI58 79 aa2.44□□□□□ -2.02
SDR39U1-205ENST00000553546 MUC16Q8WXI7 14507 aa1.95□□□□□ -2.1
Retrieved 78 of 20,778 RNA–protein pairs in 65.8 ms