RNA–Protein interactions for RNA: ENST00000553488.5

ATXN3-219, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,065 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-219ENST00000553488 BRK1Q8WUW1 75 aa2.95□□□□□ -1.94
ATXN3-219ENST00000553488 A8MUN3 132 aa2.94□□□□□ -1.94
ATXN3-219ENST00000553488 CYP4F30PQ9H0H9 118 aa2.94□□□□□ -1.94
ATXN3-219ENST00000553488 H3BPC8 53 aa2.93□□□□□ -1.94
ATXN3-219ENST00000553488 Q1T7F1 81 aa2.93□□□□□ -1.94
ATXN3-219ENST00000553488 AHNAK2Q8IVF2 5795 aa2.92□□□□□ -1.94
ATXN3-219ENST00000553488 SPANXA2-OT1Q8N9U9 137 aa2.92□□□□□ -1.94
ATXN3-219ENST00000553488 HMCN1Q96RW7 5635 aa2.91□□□□□ -1.94
ATXN3-219ENST00000553488 PLAC4Q8WY50 150 aa2.91□□□□□ -1.94
ATXN3-219ENST00000553488 TRAV22A0A0B4J277 110 aa2.88□□□□□ -1.95
ATXN3-219ENST00000553488 KRTAP5-5Q701N2 237 aaPredicted RBP2.88□□□□□ -1.95
ATXN3-219ENST00000553488 ADM2Q7Z4H4 148 aa2.88□□□□□ -1.95
ATXN3-219ENST00000553488 TP53AIP1Q9HCN2 124 aa2.87□□□□□ -1.95
ATXN3-219ENST00000553488 H0Y9P7 68 aa2.86□□□□□ -1.95
ATXN3-219ENST00000553488 LINC00208Q96KT6 92 aa2.86□□□□□ -1.95
ATXN3-219ENST00000553488 K7ERS5 55 aa2.85□□□□□ -1.95
ATXN3-219ENST00000553488 P0C880 135 aa2.82□□□□□ -1.96
ATXN3-219ENST00000553488 R4GN34 69 aa2.82□□□□□ -1.96
ATXN3-219ENST00000553488 LOC101927531A0A1B0GV80 90 aa2.81□□□□□ -1.96
ATXN3-219ENST00000553488 CHKB-CPT1BH3BT56 60 aa2.81□□□□□ -1.96
ATXN3-219ENST00000553488 M0QZ58 72 aa2.8□□□□□ -1.96
ATXN3-219ENST00000553488 COA5Q86WW8 74 aa2.8□□□□□ -1.96
ATXN3-219ENST00000553488 PRR15LQ9BU68 103 aa2.8□□□□□ -1.96
ATXN3-219ENST00000553488 A6NED7 52 aa2.78□□□□□ -1.96
ATXN3-219ENST00000553488 KTN1-AS1Q86SY8 53 aa2.78□□□□□ -1.96
ATXN3-219ENST00000553488 CDC42SE1Q9NRR8 79 aa2.78□□□□□ -1.96
ATXN3-219ENST00000553488 LINC01558Q9Y6Z2 57 aa2.78□□□□□ -1.96
ATXN3-219ENST00000553488 KRTAP5-10Q6L8G5 202 aa2.76□□□□□ -1.97
ATXN3-219ENST00000553488 KRTAP5-2Q701N4 177 aa2.76□□□□□ -1.97
ATXN3-219ENST00000553488 KRTAP19-7Q3SYF9 63 aa2.75□□□□□ -1.97
ATXN3-219ENST00000553488 LINC01554Q52M75 96 aa2.75□□□□□ -1.97
ATXN3-219ENST00000553488 KRTAP19-3Q7Z4W3 81 aa2.75□□□□□ -1.97
ATXN3-219ENST00000553488 SPTSSBQ8NFR3 76 aa2.75□□□□□ -1.97
ATXN3-219ENST00000553488 MT1EP04732 61 aa2.73□□□□□ -1.97
ATXN3-219ENST00000553488 MT4P47944 62 aa2.72□□□□□ -1.97
ATXN3-219ENST00000553488 ACYP2P14621 99 aa2.71□□□□□ -1.98
ATXN3-219ENST00000553488 A0A1B0GU33 70 aa2.68□□□□□ -1.98
ATXN3-219ENST00000553488 KRTAP5-7Q6L8G8 165 aa2.68□□□□□ -1.98
ATXN3-219ENST00000553488 DMAC1Q96GE9 116 aa2.68□□□□□ -1.98
ATXN3-219ENST00000553488 LCE1CQ5T751 118 aa2.67□□□□□ -1.98
ATXN3-219ENST00000553488 LCE1BQ5T7P3 118 aa2.67□□□□□ -1.98
ATXN3-219ENST00000553488 SPINT4Q6UDR6 99 aa2.66□□□□□ -1.98
ATXN3-219ENST00000553488 A0A1B0GU69 56 aa2.65□□□□□ -1.99
ATXN3-219ENST00000553488 KRTAP25-1Q3LHN0 102 aa2.65□□□□□ -1.99
ATXN3-219ENST00000553488 SPATA8Q6RVD6 105 aa2.64□□□□□ -1.99
ATXN3-219ENST00000553488 UQCR11O14957 56 aa2.63□□□□□ -1.99
ATXN3-219ENST00000553488 MT1GP13640 62 aa2.63□□□□□ -1.99
ATXN3-219ENST00000553488 MT1MQ8N339 61 aa2.62□□□□□ -1.99
ATXN3-219ENST00000553488 LCE3DQ9BYE3 92 aa2.62□□□□□ -1.99
ATXN3-219ENST00000553488 MIR22HGQ0VDD5 57 aa2.61□□□□□ -1.99
ATXN3-219ENST00000553488 KRTAP19-5Q3LI72 72 aa2.59□□□□□ -1.99
ATXN3-219ENST00000553488 PP632Q6XCG6 107 aa2.59□□□□□ -1.99
ATXN3-219ENST00000553488 MT1LQ93083 61 aa2.56□□□□□ -2
ATXN3-219ENST00000553488 KRTAP13-4Q3LI77 160 aa2.55□□□□□ -2
ATXN3-219ENST00000553488 A0A0D9SG42 100 aa2.52□□□□□ -2.01
ATXN3-219ENST00000553488 KRTAP20-2Q3LI61 65 aa2.52□□□□□ -2.01
ATXN3-219ENST00000553488 SPRR5A0A1B0GTR4 108 aa2.51□□□□□ -2.01
ATXN3-219ENST00000553488 AHNAKQ09666 5890 aaKnown RBP2.48□□□□□ -2.01
ATXN3-219ENST00000553488 SYNE1Q8NF91 8797 aaKnown RBP2.45□□□□□ -2.02
ATXN3-219ENST00000553488 MUC5BQ9HC84 5762 aaPredicted RBP2.44□□□□□ -2.02
ATXN3-219ENST00000553488 C10orf95Q9H7T3 257 aa2.42□□□□□ -2.02
ATXN3-219ENST00000553488 MUC5ACP98088 5654 aa2.41□□□□□ -2.02
ATXN3-219ENST00000553488 ROMO1P60602 79 aa2.4□□□□□ -2.03
ATXN3-219ENST00000553488 KRTAP12-4P60329 112 aa2.37□□□□□ -2.03
ATXN3-219ENST00000553488 KRTAP12-1P59990 96 aa2.36□□□□□ -2.03
ATXN3-219ENST00000553488 KRTAP5-8O75690 187 aa2.29□□□□□ -2.04
ATXN3-219ENST00000553488 KRTAP12-3P60328 96 aa2.29□□□□□ -2.04
ATXN3-219ENST00000553488 TNP1P09430 55 aa2.28□□□□□ -2.04
ATXN3-219ENST00000553488 KRTAP6-1Q3LI64 71 aa2.19□□□□□ -2.06
ATXN3-219ENST00000553488 MUC19Q7Z5P9 8384 aa2.19□□□□□ -2.06
ATXN3-219ENST00000553488 MT1AP04731 61 aa2.17□□□□□ -2.06
ATXN3-219ENST00000553488 KRTAP6-2Q3LI66 62 aa2.12□□□□□ -2.07
ATXN3-219ENST00000553488 INE1O15225 51 aa2.02□□□□□ -2.09
ATXN3-219ENST00000553488 KRTAP21-2Q3LI59 83 aa1.92□□□□□ -2.1
ATXN3-219ENST00000553488 PHGR1C9JFL3 82 aa1.59□□□□□ -2.15
ATXN3-219ENST00000553488 PRM1P04553 51 aa1.26□□□□□ -2.21
ATXN3-219ENST00000553488 KRTAP21-1Q3LI58 79 aa1.21□□□□□ -2.22
ATXN3-219ENST00000553488 MUC16Q8WXI7 14507 aa0.96□□□□□ -2.26
Retrieved 78 of 20,778 RNA–protein pairs in 51.7 ms