RNA–Protein interactions for RNA: ENST00000553455.1

SYNE2-210, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 2 BASIC

Gene SYNE2, Length 674 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-210ENST00000553455 COX6B2Q6YFQ2 88 aa0.6□□□□□ -2.31
SYNE2-210ENST00000553455 GTF2H5Q6ZYL4 71 aa0.6□□□□□ -2.31
SYNE2-210ENST00000553455 SPCS1Q9Y6A9 102 aa0.6□□□□□ -2.31
SYNE2-210ENST00000553455 HCG22E2RYF7 251 aa0.59□□□□□ -2.31
SYNE2-210ENST00000553455 K7EQZ3 153 aa0.59□□□□□ -2.31
SYNE2-210ENST00000553455 MT1FP04733 61 aa0.59□□□□□ -2.31
SYNE2-210ENST00000553455 KRTAP19-8Q3LI54 63 aa0.59□□□□□ -2.31
SYNE2-210ENST00000553455 ETDBQ3ZM63 59 aa0.59□□□□□ -2.31
SYNE2-210ENST00000553455 SPRR2GQ9BYE4 73 aa0.59□□□□□ -2.31
SYNE2-210ENST00000553455 UBL5Q9BZL1 73 aa0.59□□□□□ -2.31
SYNE2-210ENST00000553455 CYP4F30PQ9H0H9 118 aa0.59□□□□□ -2.31
SYNE2-210ENST00000553455 CRIPTQ9P021 101 aa0.59□□□□□ -2.31
SYNE2-210ENST00000553455 M0R2T5 61 aa0.58□□□□□ -2.32
SYNE2-210ENST00000553455 KLKP1Q107X0 134 aa0.58□□□□□ -2.32
SYNE2-210ENST00000553455 ATP5EP2Q5VTU8 51 aa0.58□□□□□ -2.32
SYNE2-210ENST00000553455 LINC00643Q86TS7 51 aa0.58□□□□□ -2.32
SYNE2-210ENST00000553455 MACF1Q9UPN3 7388 aaKnown RBP0.58□□□□□ -2.32
SYNE2-210ENST00000553455 MUC12Q9UKN1 5478 aa0.58□□□□□ -2.32
SYNE2-210ENST00000553455 MDN1Q9NU22 5596 aa0.57□□□□□ -2.32
SYNE2-210ENST00000553455 SYNE2Q8WXH0 6885 aaKnown RBP0.57□□□□□ -2.32
SYNE2-210ENST00000553455 ATOX1O00244 68 aa0.57□□□□□ -2.32
SYNE2-210ENST00000553455 VPS25Q9BRG1 176 aa0.57□□□□□ -2.32
SYNE2-210ENST00000553455 TRAV22A0A0B4J277 110 aa0.56□□□□□ -2.32
SYNE2-210ENST00000553455 J3QR89 54 aa0.56□□□□□ -2.32
SYNE2-210ENST00000553455 MT1BP07438 61 aa0.56□□□□□ -2.32
SYNE2-210ENST00000553455 NEBP20929 6669 aa0.56□□□□□ -2.32
SYNE2-210ENST00000553455 KMT2DO14686 5537 aa0.56□□□□□ -2.32
SYNE2-210ENST00000553455 A0A1B0GV90 55 aa0.55□□□□□ -2.32
SYNE2-210ENST00000553455 PHGR1C9JFL3 82 aa0.55□□□□□ -2.32
SYNE2-210ENST00000553455 A0A087WVE0 104 aa0.54□□□□□ -2.32
SYNE2-210ENST00000553455 H0Y9P7 68 aa0.54□□□□□ -2.32
SYNE2-210ENST00000553455 K7ERU9 68 aa0.54□□□□□ -2.32
SYNE2-210ENST00000553455 M0QZ58 72 aa0.54□□□□□ -2.32
SYNE2-210ENST00000553455 NDUFC1O43677 76 aa0.54□□□□□ -2.32
SYNE2-210ENST00000553455 S4R3F8 94 aa0.54□□□□□ -2.32
SYNE2-210ENST00000553455 MT-ATP8P03928 68 aa0.53□□□□□ -2.32
SYNE2-210ENST00000553455 ACYP2P14621 99 aa0.53□□□□□ -2.32
SYNE2-210ENST00000553455 MT1XP80297 61 aa0.53□□□□□ -2.32
SYNE2-210ENST00000553455 Q5VV11 94 aa0.53□□□□□ -2.32
SYNE2-210ENST00000553455 SERP2Q8N6R1 65 aa0.53□□□□□ -2.32
SYNE2-210ENST00000553455 C20orf197Q8N268 126 aa0.52□□□□□ -2.33
SYNE2-210ENST00000553455 SPTSSBQ8NFR3 76 aa0.51□□□□□ -2.33
SYNE2-210ENST00000553455 FAM236AA0A1B0GUQ0 79 aa0.5□□□□□ -2.33
SYNE2-210ENST00000553455 FAM236BA0A1B0GV22 79 aa0.5□□□□□ -2.33
SYNE2-210ENST00000553455 H7BZZ5 65 aa0.5□□□□□ -2.33
SYNE2-210ENST00000553455 GPR98Q8WXG9 6306 aa0.48□□□□□ -2.33
SYNE2-210ENST00000553455 MUC5ACP98088 5654 aa0.48□□□□□ -2.33
SYNE2-210ENST00000553455 MT1GP13640 62 aa0.48□□□□□ -2.33
SYNE2-210ENST00000553455 ATP5EP56381 51 aaPredicted RBP0.48□□□□□ -2.33
SYNE2-210ENST00000553455 KRTAP19-7Q3SYF9 63 aa0.48□□□□□ -2.33
SYNE2-210ENST00000553455 LINC01558Q9Y6Z2 57 aa0.48□□□□□ -2.33
SYNE2-210ENST00000553455 DSTQ03001 7570 aaKnown RBP0.48□□□□□ -2.33
SYNE2-210ENST00000553455 MT1EP04732 61 aa0.47□□□□□ -2.33
SYNE2-210ENST00000553455 KRTAP20-1Q3LI63 56 aa0.47□□□□□ -2.33
SYNE2-210ENST00000553455 KRTAP8-1Q8IUC2 63 aa0.47□□□□□ -2.33
SYNE2-210ENST00000553455 SERP1Q9Y6X1 66 aa0.47□□□□□ -2.33
SYNE2-210ENST00000553455 CHKB-CPT1BH3BT56 60 aa0.46□□□□□ -2.34
SYNE2-210ENST00000553455 CCDC179H3BU77 68 aa0.46□□□□□ -2.34
SYNE2-210ENST00000553455 SPRR2FQ96RM1 72 aa0.46□□□□□ -2.34
SYNE2-210ENST00000553455 SYNE1Q8NF91 8797 aaKnown RBP0.45□□□□□ -2.34
SYNE2-210ENST00000553455 SPRR2EP22531 72 aa0.45□□□□□ -2.34
SYNE2-210ENST00000553455 SPRR2BP35325 72 aa0.45□□□□□ -2.34
SYNE2-210ENST00000553455 SPRR2AP35326 72 aa0.45□□□□□ -2.34
SYNE2-210ENST00000553455 MT1LQ93083 61 aa0.45□□□□□ -2.34
SYNE2-210ENST00000553455 A0A1B0GU69 56 aa0.44□□□□□ -2.34
SYNE2-210ENST00000553455 UQCR11O14957 56 aa0.44□□□□□ -2.34
SYNE2-210ENST00000553455 TNP1P09430 55 aa0.44□□□□□ -2.34
SYNE2-210ENST00000553455 SPRR2DP22532 72 aa0.44□□□□□ -2.34
SYNE2-210ENST00000553455 KRTAP19-5Q3LI72 72 aa0.44□□□□□ -2.34
SYNE2-210ENST00000553455 MT1MQ8N339 61 aa0.44□□□□□ -2.34
SYNE2-210ENST00000553455 PRR15LQ9BU68 103 aa0.44□□□□□ -2.34
SYNE2-210ENST00000553455 KRTAP20-2Q3LI61 65 aa0.39□□□□□ -2.35
SYNE2-210ENST00000553455 MT1AP04731 61 aa0.38□□□□□ -2.35
SYNE2-210ENST00000553455 MT4P47944 62 aa0.36□□□□□ -2.35
SYNE2-210ENST00000553455 KRTAP6-1Q3LI64 71 aa0.36□□□□□ -2.35
SYNE2-210ENST00000553455 KRTAP6-2Q3LI66 62 aa0.34□□□□□ -2.36
SYNE2-210ENST00000553455 PRM1P04553 51 aa0.17□□□□□ -2.38
Retrieved 77 of 20,778 RNA–protein pairs in 101 ms