RNA–Protein interactions for RNA: ENST00000553247.1

LINC02407-202, Transcript of long intergenic non-protein coding RNA 2407, humanhuman

TSL 3 BASIC

Gene LINC02407, Length 1,083 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02407-202ENST00000553247 LINC01558Q9Y6Z2 57 aa3.42□□□□□ -1.86
LINC02407-202ENST00000553247 SPTSSBQ8NFR3 76 aa3.41□□□□□ -1.86
LINC02407-202ENST00000553247 BRK1Q8WUW1 75 aa3.41□□□□□ -1.86
LINC02407-202ENST00000553247 PLAC4Q8WY50 150 aa3.4□□□□□ -1.87
LINC02407-202ENST00000553247 PRO2289Q9P1D8 64 aa3.4□□□□□ -1.87
LINC02407-202ENST00000553247 R4GN34 69 aa3.4□□□□□ -1.87
LINC02407-202ENST00000553247 MT1XP80297 61 aa3.39□□□□□ -1.87
LINC02407-202ENST00000553247 PSPHP1O15172 72 aa3.38□□□□□ -1.87
LINC02407-202ENST00000553247 M0QZ58 72 aa3.36□□□□□ -1.87
LINC02407-202ENST00000553247 A6NED7 52 aa3.35□□□□□ -1.87
LINC02407-202ENST00000553247 SEC61GP60059 68 aa3.35□□□□□ -1.87
LINC02407-202ENST00000553247 KRTAP12-2P59991 146 aa3.34□□□□□ -1.87
LINC02407-202ENST00000553247 A0A1B0GU69 56 aa3.33□□□□□ -1.88
LINC02407-202ENST00000553247 CDC42SE1Q9NRR8 79 aa3.33□□□□□ -1.88
LINC02407-202ENST00000553247 KRTAP2-1Q9BYU5 128 aa3.3□□□□□ -1.88
LINC02407-202ENST00000553247 UQCR11O14957 56 aa3.29□□□□□ -1.88
LINC02407-202ENST00000553247 LINC01554Q52M75 96 aa3.28□□□□□ -1.88
LINC02407-202ENST00000553247 PMAIP1Q13794 54 aa3.27□□□□□ -1.89
LINC02407-202ENST00000553247 SPRR2FQ96RM1 72 aa3.27□□□□□ -1.89
LINC02407-202ENST00000553247 KRTAP8-1Q8IUC2 63 aa3.26□□□□□ -1.89
LINC02407-202ENST00000553247 SPRR2EP22531 72 aa3.25□□□□□ -1.89
LINC02407-202ENST00000553247 SPRR2BP35325 72 aa3.25□□□□□ -1.89
LINC02407-202ENST00000553247 SPRR2AP35326 72 aa3.25□□□□□ -1.89
LINC02407-202ENST00000553247 SPATA8Q6RVD6 105 aa3.24□□□□□ -1.89
LINC02407-202ENST00000553247 MIR22HGQ0VDD5 57 aa3.23□□□□□ -1.89
LINC02407-202ENST00000553247 LCE3EQ5T5B0 92 aa3.21□□□□□ -1.9
LINC02407-202ENST00000553247 MUC19Q7Z5P9 8384 aa3.21□□□□□ -1.9
LINC02407-202ENST00000553247 KTN1-AS1Q86SY8 53 aa3.2□□□□□ -1.9
LINC02407-202ENST00000553247 KRTAP13-4Q3LI77 160 aa3.19□□□□□ -1.9
LINC02407-202ENST00000553247 A0A1B0GU33 70 aa3.17□□□□□ -1.9
LINC02407-202ENST00000553247 K7ERS5 55 aa3.17□□□□□ -1.9
LINC02407-202ENST00000553247 DSTQ03001 7570 aaKnown RBP3.17□□□□□ -1.9
LINC02407-202ENST00000553247 A0A0A0MQY5 61 aa3.13□□□□□ -1.91
LINC02407-202ENST00000553247 SPRR2DP22532 72 aa3.13□□□□□ -1.91
LINC02407-202ENST00000553247 A8MU10 97 aa3.11□□□□□ -1.91
LINC02407-202ENST00000553247 CAMK2N1Q7Z7J9 78 aa3.11□□□□□ -1.91
LINC02407-202ENST00000553247 HMCN1Q96RW7 5635 aa3.08□□□□□ -1.92
LINC02407-202ENST00000553247 A0A0D9SG42 100 aa3.05□□□□□ -1.92
LINC02407-202ENST00000553247 KRTAP19-7Q3SYF9 63 aa3.05□□□□□ -1.92
LINC02407-202ENST00000553247 KRTAP12-1P59990 96 aa3.04□□□□□ -1.92
LINC02407-202ENST00000553247 SPINT4Q6UDR6 99 aa3.02□□□□□ -1.93
LINC02407-202ENST00000553247 AHNAK2Q8IVF2 5795 aa3.02□□□□□ -1.93
LINC02407-202ENST00000553247 MT1EP04732 61 aa3.01□□□□□ -1.93
LINC02407-202ENST00000553247 KRTAP19-3Q7Z4W3 81 aa2.98□□□□□ -1.93
LINC02407-202ENST00000553247 ROMO1P60602 79 aa2.96□□□□□ -1.94
LINC02407-202ENST00000553247 MT1GP13640 62 aa2.94□□□□□ -1.94
LINC02407-202ENST00000553247 KRTAP19-5Q3LI72 72 aa2.94□□□□□ -1.94
LINC02407-202ENST00000553247 KRTAP5-10Q6L8G5 202 aa2.94□□□□□ -1.94
LINC02407-202ENST00000553247 KRTAP5-7Q6L8G8 165 aa2.93□□□□□ -1.94
LINC02407-202ENST00000553247 KRTAP25-1Q3LHN0 102 aa2.92□□□□□ -1.94
LINC02407-202ENST00000553247 C10orf95Q9H7T3 257 aa2.92□□□□□ -1.94
LINC02407-202ENST00000553247 PRAC1Q96KF2 57 aa2.91□□□□□ -1.94
LINC02407-202ENST00000553247 TNP1P09430 55 aa2.89□□□□□ -1.95
LINC02407-202ENST00000553247 PP632Q6XCG6 107 aa2.88□□□□□ -1.95
LINC02407-202ENST00000553247 MT1LQ93083 61 aa2.87□□□□□ -1.95
LINC02407-202ENST00000553247 MT1MQ8N339 61 aa2.86□□□□□ -1.95
LINC02407-202ENST00000553247 MT4P47944 62 aa2.84□□□□□ -1.95
LINC02407-202ENST00000553247 SPRR5A0A1B0GTR4 108 aa2.79□□□□□ -1.96
LINC02407-202ENST00000553247 KRTAP12-3P60328 96 aa2.78□□□□□ -1.96
LINC02407-202ENST00000553247 KRTAP21-2Q3LI59 83 aa2.72□□□□□ -1.97
LINC02407-202ENST00000553247 AHNAKQ09666 5890 aaKnown RBP2.58□□□□□ -2
LINC02407-202ENST00000553247 KRTAP12-4P60329 112 aa2.57□□□□□ -2
LINC02407-202ENST00000553247 KRTAP20-2Q3LI61 65 aa2.57□□□□□ -2
LINC02407-202ENST00000553247 LUZP6Q538Z0 58 aa2.55□□□□□ -2
LINC02407-202ENST00000553247 SYNE1Q8NF91 8797 aaKnown RBP2.54□□□□□ -2
LINC02407-202ENST00000553247 MUC5ACP98088 5654 aa2.54□□□□□ -2
LINC02407-202ENST00000553247 MUC5BQ9HC84 5762 aaPredicted RBP2.5□□□□□ -2.01
LINC02407-202ENST00000553247 NDUFAF8A1L188 74 aa2.48□□□□□ -2.01
LINC02407-202ENST00000553247 MT1AP04731 61 aa2.45□□□□□ -2.02
LINC02407-202ENST00000553247 KRTAP6-1Q3LI64 71 aa2.42□□□□□ -2.02
LINC02407-202ENST00000553247 KRTAP6-2Q3LI66 62 aa2.31□□□□□ -2.04
LINC02407-202ENST00000553247 INE1O15225 51 aa2.18□□□□□ -2.06
LINC02407-202ENST00000553247 LCE3DQ9BYE3 92 aa2.15□□□□□ -2.07
LINC02407-202ENST00000553247 PHGR1C9JFL3 82 aa1.71□□□□□ -2.14
LINC02407-202ENST00000553247 PRM1P04553 51 aa1.51□□□□□ -2.17
LINC02407-202ENST00000553247 KRTAP21-1Q3LI58 79 aa1.24□□□□□ -2.21
LINC02407-202ENST00000553247 MUC16Q8WXI7 14507 aa1.05□□□□□ -2.24
Retrieved 77 of 20,778 RNA–protein pairs in 5.8 ms