RNA–Protein interactions for RNA: ENST00000553024.1

PPP1CC-210, Transcript of protein phosphatase 1 catalytic subunit gamma, humanhuman

TSL 2

Gene PPP1CC, Length 2,797 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1CC-210ENST00000553024 KRTAP10-7P60409 375 aaPredicted RBP2.74□□□□□ -1.97
PPP1CC-210ENST00000553024 KRTAP10-5P60370 271 aa2.73□□□□□ -1.97
PPP1CC-210ENST00000553024 SSPOA2VEC9 5147 aa2.73□□□□□ -1.97
PPP1CC-210ENST00000553024 MT1XP80297 61 aa2.72□□□□□ -1.97
PPP1CC-210ENST00000553024 KRTAP19-6Q3LI70 58 aa2.72□□□□□ -1.97
PPP1CC-210ENST00000553024 PRO2289Q9P1D8 64 aa2.72□□□□□ -1.97
PPP1CC-210ENST00000553024 KRTAP12-3P60328 96 aa2.71□□□□□ -1.98
PPP1CC-210ENST00000553024 KRTAP8-1Q8IUC2 63 aa2.7□□□□□ -1.98
PPP1CC-210ENST00000553024 CRCT1Q9UGL9 99 aa2.68□□□□□ -1.98
PPP1CC-210ENST00000553024 KRTAP10-12P60413 245 aa2.67□□□□□ -1.98
PPP1CC-210ENST00000553024 FCGBPQ9Y6R7 5405 aaPredicted RBP2.65□□□□□ -1.99
PPP1CC-210ENST00000553024 LCE1AQ5T7P2 110 aa2.63□□□□□ -1.99
PPP1CC-210ENST00000553024 LCE1FQ5T754 118 aa2.62□□□□□ -1.99
PPP1CC-210ENST00000553024 KRTAP19-5Q3LI72 72 aa2.61□□□□□ -1.99
PPP1CC-210ENST00000553024 KRTAP9-6A8MVA2 160 aa2.6□□□□□ -1.99
PPP1CC-210ENST00000553024 DSTQ03001 7570 aaKnown RBP2.58□□□□□ -2
PPP1CC-210ENST00000553024 INE1O15225 51 aa2.57□□□□□ -2
PPP1CC-210ENST00000553024 LCE3CQ5T5A8 94 aa2.54□□□□□ -2
PPP1CC-210ENST00000553024 MACF1Q9UPN3 7388 aaKnown RBP2.52□□□□□ -2.01
PPP1CC-210ENST00000553024 MUC12Q9UKN1 5478 aa2.51□□□□□ -2.01
PPP1CC-210ENST00000553024 SYNE1Q8NF91 8797 aaKnown RBP2.48□□□□□ -2.01
PPP1CC-210ENST00000553024 SYNE2Q8WXH0 6885 aaKnown RBP2.45□□□□□ -2.02
PPP1CC-210ENST00000553024 OBSCNQ5VST9 7968 aa2.44□□□□□ -2.02
PPP1CC-210ENST00000553024 MT3P25713 68 aa2.44□□□□□ -2.02
PPP1CC-210ENST00000553024 KRTAP19-7Q3SYF9 63 aa2.43□□□□□ -2.02
PPP1CC-210ENST00000553024 KRTAP4-3Q9BYR4 195 aa2.42□□□□□ -2.02
PPP1CC-210ENST00000553024 KRTAP5-9P26371 169 aa2.41□□□□□ -2.02
PPP1CC-210ENST00000553024 KRTAP2-2Q9BYT5 123 aa2.41□□□□□ -2.02
PPP1CC-210ENST00000553024 SPRR2FQ96RM1 72 aa2.41□□□□□ -2.02
PPP1CC-210ENST00000553024 KRTAP6-3Q3LI67 103 aa2.4□□□□□ -2.03
PPP1CC-210ENST00000553024 MT1EP04732 61 aa2.39□□□□□ -2.03
PPP1CC-210ENST00000553024 KRTAP2-3P0C7H8 128 aa2.38□□□□□ -2.03
PPP1CC-210ENST00000553024 KRTAP2-4Q9BYR9 128 aa2.38□□□□□ -2.03
PPP1CC-210ENST00000553024 KRTAP2-1Q9BYU5 128 aa2.38□□□□□ -2.03
PPP1CC-210ENST00000553024 MDN1Q9NU22 5596 aa2.37□□□□□ -2.03
PPP1CC-210ENST00000553024 MT1LQ93083 61 aa2.34□□□□□ -2.03
PPP1CC-210ENST00000553024 MT1GP13640 62 aa2.32□□□□□ -2.04
PPP1CC-210ENST00000553024 KRTAP19-3Q7Z4W3 81 aa2.32□□□□□ -2.04
PPP1CC-210ENST00000553024 SPRR2EP22531 72 aa2.3□□□□□ -2.04
PPP1CC-210ENST00000553024 SPRR2BP35325 72 aa2.3□□□□□ -2.04
PPP1CC-210ENST00000553024 SPRR2AP35326 72 aa2.3□□□□□ -2.04
PPP1CC-210ENST00000553024 LCE3EQ5T5B0 92 aa2.3□□□□□ -2.04
PPP1CC-210ENST00000553024 GPR98Q8WXG9 6306 aa2.27□□□□□ -2.05
PPP1CC-210ENST00000553024 KRTAP12-4P60329 112 aa2.25□□□□□ -2.05
PPP1CC-210ENST00000553024 MT1MQ8N339 61 aa2.25□□□□□ -2.05
PPP1CC-210ENST00000553024 KRTAP5-11Q6L8G4 156 aa2.22□□□□□ -2.05
PPP1CC-210ENST00000553024 SPRR2DP22532 72 aa2.21□□□□□ -2.05
PPP1CC-210ENST00000553024 NEBP20929 6669 aa2.21□□□□□ -2.05
PPP1CC-210ENST00000553024 LCE1EQ5T753 118 aa2.19□□□□□ -2.06
PPP1CC-210ENST00000553024 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.18□□□□□ -2.06
PPP1CC-210ENST00000553024 KRTAP20-1Q3LI63 56 aa2.1□□□□□ -2.07
PPP1CC-210ENST00000553024 KRTAP6-1Q3LI64 71 aa2.06□□□□□ -2.08
PPP1CC-210ENST00000553024 LCE3DQ9BYE3 92 aa2.06□□□□□ -2.08
PPP1CC-210ENST00000553024 KRTAP5-5Q701N2 237 aaPredicted RBP2.05□□□□□ -2.08
PPP1CC-210ENST00000553024 HMCN1Q96RW7 5635 aa2.04□□□□□ -2.08
PPP1CC-210ENST00000553024 PRM1P04553 51 aa2.03□□□□□ -2.09
PPP1CC-210ENST00000553024 KRTAP5-4Q6L8H1 288 aa1.99□□□□□ -2.09
PPP1CC-210ENST00000553024 MUC5BQ9HC84 5762 aaPredicted RBP1.99□□□□□ -2.09
PPP1CC-210ENST00000553024 MT1AP04731 61 aa1.98□□□□□ -2.09
PPP1CC-210ENST00000553024 KRTAP5-1Q6L8H4 278 aa1.93□□□□□ -2.1
PPP1CC-210ENST00000553024 MT4P47944 62 aa1.93□□□□□ -2.1
PPP1CC-210ENST00000553024 KRTAP6-2Q3LI66 62 aa1.91□□□□□ -2.1
PPP1CC-210ENST00000553024 KRTAP20-2Q3LI61 65 aa1.87□□□□□ -2.11
PPP1CC-210ENST00000553024 AHNAKQ09666 5890 aaKnown RBP1.84□□□□□ -2.12
PPP1CC-210ENST00000553024 KRTAP4-4Q9BYR3 166 aa1.83□□□□□ -2.12
PPP1CC-210ENST00000553024 KRTAP5-2Q701N4 177 aa1.79□□□□□ -2.12
PPP1CC-210ENST00000553024 MUC19Q7Z5P9 8384 aa1.7□□□□□ -2.14
PPP1CC-210ENST00000553024 AHNAK2Q8IVF2 5795 aa1.68□□□□□ -2.14
PPP1CC-210ENST00000553024 MUC5ACP98088 5654 aa1.66□□□□□ -2.14
PPP1CC-210ENST00000553024 KRTAP5-10Q6L8G5 202 aa1.64□□□□□ -2.15
PPP1CC-210ENST00000553024 KRTAP5-8O75690 187 aa1.58□□□□□ -2.16
PPP1CC-210ENST00000553024 LCE1BQ5T7P3 118 aa1.53□□□□□ -2.17
PPP1CC-210ENST00000553024 KRTAP5-7Q6L8G8 165 aa1.53□□□□□ -2.17
PPP1CC-210ENST00000553024 LCE1CQ5T751 118 aa1.48□□□□□ -2.17
PPP1CC-210ENST00000553024 KRTAP21-2Q3LI59 83 aa1.29□□□□□ -2.2
PPP1CC-210ENST00000553024 KRTAP21-1Q3LI58 79 aa1.19□□□□□ -2.22
PPP1CC-210ENST00000553024 PHGR1C9JFL3 82 aa1.13□□□□□ -2.23
PPP1CC-210ENST00000553024 MUC16Q8WXI7 14507 aa0.71□□□□□ -2.3
Retrieved 78 of 20,778 RNA–protein pairs in 255 ms