RNA–Protein interactions for RNA: ENST00000552583.1

ITGA5-212, Transcript of integrin subunit alpha 5, humanhuman

TSL 2

Gene ITGA5, Length 568 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA5-212ENST00000552583 LCE3BQ5TA77 95 aa5.34□□□□□ -1.55
ITGA5-212ENST00000552583 KRTAP19-7Q3SYF9 63 aa5.33□□□□□ -1.56
ITGA5-212ENST00000552583 MT1EP04732 61 aa5.29□□□□□ -1.56
ITGA5-212ENST00000552583 ROMO1P60602 79 aa5.29□□□□□ -1.56
ITGA5-212ENST00000552583 KRTAP25-1Q3LHN0 102 aa5.28□□□□□ -1.56
ITGA5-212ENST00000552583 LCE5AQ5TCM9 118 aa5.26□□□□□ -1.57
ITGA5-212ENST00000552583 KRTAP19-3Q7Z4W3 81 aa5.26□□□□□ -1.57
ITGA5-212ENST00000552583 KRTAP19-5Q3LI72 72 aa5.19□□□□□ -1.58
ITGA5-212ENST00000552583 LCE3AQ5TA76 89 aa5.18□□□□□ -1.58
ITGA5-212ENST00000552583 MT1GP13640 62 aa5.15□□□□□ -1.59
ITGA5-212ENST00000552583 PP632Q6XCG6 107 aa5.15□□□□□ -1.59
ITGA5-212ENST00000552583 PRO0628Q9UI54 55 aa5.15□□□□□ -1.59
ITGA5-212ENST00000552583 KRTAP23-1A1A580 65 aa5.11□□□□□ -1.59
ITGA5-212ENST00000552583 PMAIP1Q13794 54 aa5.11□□□□□ -1.59
ITGA5-212ENST00000552583 MT1LQ93083 61 aa5.06□□□□□ -1.6
ITGA5-212ENST00000552583 MT1MQ8N339 61 aa5.04□□□□□ -1.6
ITGA5-212ENST00000552583 DSTQ03001 7570 aaKnown RBP5.02□□□□□ -1.61
ITGA5-212ENST00000552583 KRTAP12-3P60328 96 aa4.98□□□□□ -1.61
ITGA5-212ENST00000552583 LCE4AQ5TA78 99 aa4.9□□□□□ -1.63
ITGA5-212ENST00000552583 KRTAP4-9Q9BYQ8 210 aa4.88□□□□□ -1.63
ITGA5-212ENST00000552583 KTN1-AS1Q86SY8 53 aa4.84□□□□□ -1.63
ITGA5-212ENST00000552583 LCE1DQ5T752 114 aa4.83□□□□□ -1.64
ITGA5-212ENST00000552583 PRAC1Q96KF2 57 aa4.82□□□□□ -1.64
ITGA5-212ENST00000552583 KRTAP4-3Q9BYR4 195 aa4.82□□□□□ -1.64
ITGA5-212ENST00000552583 KRTAP15-1Q3LI76 137 aa4.8□□□□□ -1.64
ITGA5-212ENST00000552583 KRTAP5-4Q6L8H1 288 aa4.8□□□□□ -1.64
ITGA5-212ENST00000552583 KRTAP19-4Q3LI73 84 aa4.79□□□□□ -1.64
ITGA5-212ENST00000552583 MT4P47944 62 aa4.75□□□□□ -1.65
ITGA5-212ENST00000552583 KRTAP4-7Q9BYR0 210 aa4.73□□□□□ -1.65
ITGA5-212ENST00000552583 GPR98Q8WXG9 6306 aa4.73□□□□□ -1.65
ITGA5-212ENST00000552583 HMCN1Q96RW7 5635 aa4.72□□□□□ -1.65
ITGA5-212ENST00000552583 KRTAP5-5Q701N2 237 aaPredicted RBP4.63□□□□□ -1.67
ITGA5-212ENST00000552583 LCE3CQ5T5A8 94 aa4.62□□□□□ -1.67
ITGA5-212ENST00000552583 KRTAP4-6Q9BYQ5 205 aa4.61□□□□□ -1.67
ITGA5-212ENST00000552583 AHNAK2Q8IVF2 5795 aa4.54□□□□□ -1.68
ITGA5-212ENST00000552583 SPRR5A0A1B0GTR4 108 aa4.54□□□□□ -1.68
ITGA5-212ENST00000552583 KRTAP12-4P60329 112 aa4.52□□□□□ -1.69
ITGA5-212ENST00000552583 KRTAP20-2Q3LI61 65 aa4.51□□□□□ -1.69
ITGA5-212ENST00000552583 LOC100996750A0A140TA64 210 aa4.48□□□□□ -1.69
ITGA5-212ENST00000552583 KRTAP5-10Q6L8G5 202 aa4.48□□□□□ -1.69
ITGA5-212ENST00000552583 KRTAP5-3Q6L8H2 238 aa4.39□□□□□ -1.71
ITGA5-212ENST00000552583 SYNE1Q8NF91 8797 aaKnown RBP4.39□□□□□ -1.71
ITGA5-212ENST00000552583 KRTAP9-6A8MVA2 160 aa4.34□□□□□ -1.71
ITGA5-212ENST00000552583 MT1AP04731 61 aa4.33□□□□□ -1.72
ITGA5-212ENST00000552583 KRTAP5-7Q6L8G8 165 aa4.33□□□□□ -1.72
ITGA5-212ENST00000552583 KRTAP6-1Q3LI64 71 aa4.26□□□□□ -1.73
ITGA5-212ENST00000552583 KRTAP5-2Q701N4 177 aa4.22□□□□□ -1.73
ITGA5-212ENST00000552583 LUZP6Q538Z0 58 aa4.2□□□□□ -1.74
ITGA5-212ENST00000552583 KRTAP9-4Q9BYQ2 154 aa4.16□□□□□ -1.74
ITGA5-212ENST00000552583 KRTAP4-11Q9BYQ6 195 aa4.11□□□□□ -1.75
ITGA5-212ENST00000552583 KRTAP6-2Q3LI66 62 aa4.06□□□□□ -1.76
ITGA5-212ENST00000552583 MT3P25713 68 aa3.97□□□□□ -1.77
ITGA5-212ENST00000552583 KRTAP5-8O75690 187 aa3.96□□□□□ -1.78
ITGA5-212ENST00000552583 OBSCNQ5VST9 7968 aa3.79□□□□□ -1.8
ITGA5-212ENST00000552583 KRTAP9-9Q9BYP9 154 aa3.77□□□□□ -1.81
ITGA5-212ENST00000552583 KRTAP5-1Q6L8H4 278 aa3.75□□□□□ -1.81
ITGA5-212ENST00000552583 NDUFAF8A1L188 74 aa3.74□□□□□ -1.81
ITGA5-212ENST00000552583 MUC5ACP98088 5654 aa3.72□□□□□ -1.81
ITGA5-212ENST00000552583 AHNAKQ09666 5890 aaKnown RBP3.7□□□□□ -1.82
ITGA5-212ENST00000552583 MUC5BQ9HC84 5762 aaPredicted RBP3.69□□□□□ -1.82
ITGA5-212ENST00000552583 LCE1EQ5T753 118 aa3.66□□□□□ -1.82
ITGA5-212ENST00000552583 LCE3DQ9BYE3 92 aa3.42□□□□□ -1.86
ITGA5-212ENST00000552583 KRTAP4-2Q9BYR5 136 aa3.4□□□□□ -1.87
ITGA5-212ENST00000552583 LCE1CQ5T751 118 aa3.38□□□□□ -1.87
ITGA5-212ENST00000552583 LCE1BQ5T7P3 118 aa3.38□□□□□ -1.87
ITGA5-212ENST00000552583 LCE3EQ5T5B0 92 aa3.29□□□□□ -1.88
ITGA5-212ENST00000552583 INE1O15225 51 aa3.22□□□□□ -1.89
ITGA5-212ENST00000552583 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.1□□□□□ -1.91
ITGA5-212ENST00000552583 KRTAP5-11Q6L8G4 156 aa3.08□□□□□ -1.92
ITGA5-212ENST00000552583 KRTAP4-12Q9BQ66 201 aa3.02□□□□□ -1.93
ITGA5-212ENST00000552583 LCE1FQ5T754 118 aa3□□□□□ -1.93
ITGA5-212ENST00000552583 KRTAP21-2Q3LI59 83 aa2.81□□□□□ -1.96
ITGA5-212ENST00000552583 PRM1P04553 51 aa2.73□□□□□ -1.97
ITGA5-212ENST00000552583 PHGR1C9JFL3 82 aa2.63□□□□□ -1.99
ITGA5-212ENST00000552583 KRTAP4-4Q9BYR3 166 aa2.5□□□□□ -2.01
ITGA5-212ENST00000552583 MUC19Q7Z5P9 8384 aa2.35□□□□□ -2.03
ITGA5-212ENST00000552583 KRTAP21-1Q3LI58 79 aa2.02□□□□□ -2.09
ITGA5-212ENST00000552583 MUC16Q8WXI7 14507 aa1.77□□□□□ -2.13
Retrieved 78 of 20,778 RNA–protein pairs in 281 ms