RNA–Protein interactions for RNA: ENST00000552465.1

CACNB3-222, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, human

TSL 3

Gene CACNB3, Length 557 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CACNB3-222	ENST00000552465	SERP1	Q9Y6X1	66 aa		5.7	□□□□□ -1.5
CACNB3-222	ENST00000552465	LCE3A	Q5TA76	89 aa		5.67	□□□□□ -1.5
CACNB3-222	ENST00000552465	SPATA8	Q6RVD6	105 aa		5.67	□□□□□ -1.5
CACNB3-222	ENST00000552465	KRTAP12-1	P59990	96 aa		5.66	□□□□□ -1.5
CACNB3-222	ENST00000552465	KRTAP4-7	Q9BYR0	210 aa		5.66	□□□□□ -1.5
CACNB3-222	ENST00000552465		H7BZZ5	65 aa		5.65	□□□□□ -1.5
CACNB3-222	ENST00000552465	SMIM26	A0A096LP01	95 aa		5.62	□□□□□ -1.51
CACNB3-222	ENST00000552465	KRTAP5-5	Q701N2	237 aa	Predicted RBP	5.6	□□□□□ -1.51
CACNB3-222	ENST00000552465	SPANXA2-OT1	Q8N9U9	137 aa		5.59	□□□□□ -1.51
CACNB3-222	ENST00000552465	SNURF	Q9Y675	71 aa		5.59	□□□□□ -1.51
CACNB3-222	ENST00000552465	KRTAP12-4	P60329	112 aa		5.58	□□□□□ -1.52
CACNB3-222	ENST00000552465	SEC61G	P60059	68 aa		5.57	□□□□□ -1.52
CACNB3-222	ENST00000552465		A0A1B0GU33	70 aa		5.54	□□□□□ -1.52
CACNB3-222	ENST00000552465	TNP1	P09430	55 aa		5.52	□□□□□ -1.53
CACNB3-222	ENST00000552465	COA5	Q86WW8	74 aa		5.47	□□□□□ -1.53
CACNB3-222	ENST00000552465	PRO0628	Q9UI54	55 aa		5.47	□□□□□ -1.53
CACNB3-222	ENST00000552465		V9GYY9	64 aa		5.47	□□□□□ -1.53
CACNB3-222	ENST00000552465	KRTAP12-3	P60328	96 aa		5.45	□□□□□ -1.54
CACNB3-222	ENST00000552465		H3BS24	57 aa		5.44	□□□□□ -1.54
CACNB3-222	ENST00000552465	SYNE1	Q8NF91	8797 aa	Known RBP	5.41	□□□□□ -1.54
CACNB3-222	ENST00000552465		Q1T7F1	81 aa		5.39	□□□□□ -1.55
CACNB3-222	ENST00000552465	LOC100996750	A0A140TA64	210 aa		5.38	□□□□□ -1.55
CACNB3-222	ENST00000552465	KRTAP4-11	Q9BYQ6	195 aa		5.38	□□□□□ -1.55
CACNB3-222	ENST00000552465		A8MU10	97 aa		5.35	□□□□□ -1.55
CACNB3-222	ENST00000552465	BRK1	Q8WUW1	75 aa		5.31	□□□□□ -1.56
CACNB3-222	ENST00000552465	AHNAK	Q09666	5890 aa	Known RBP	5.28	□□□□□ -1.56
CACNB3-222	ENST00000552465	MUC5AC	P98088	5654 aa		5.24	□□□□□ -1.57
CACNB3-222	ENST00000552465	KRTAP5-2	Q701N4	177 aa		5.22	□□□□□ -1.57
CACNB3-222	ENST00000552465	KRTAP5-8	O75690	187 aa		5.21	□□□□□ -1.58
CACNB3-222	ENST00000552465		A0A1B0GU69	56 aa		5.2	□□□□□ -1.58
CACNB3-222	ENST00000552465	MUC5B	Q9HC84	5762 aa	Predicted RBP	5.16	□□□□□ -1.58
CACNB3-222	ENST00000552465	PSPHP1	O15172	72 aa		5.15	□□□□□ -1.59
CACNB3-222	ENST00000552465	PRR15L	Q9BU68	103 aa		5.14	□□□□□ -1.59
CACNB3-222	ENST00000552465	LINC01558	Q9Y6Z2	57 aa		5.14	□□□□□ -1.59
CACNB3-222	ENST00000552465		A0A0A0MQY5	61 aa		5.11	□□□□□ -1.59
CACNB3-222	ENST00000552465	PMAIP1	Q13794	54 aa		5.11	□□□□□ -1.59
CACNB3-222	ENST00000552465	KRTAP19-4	Q3LI73	84 aa		5.11	□□□□□ -1.59
CACNB3-222	ENST00000552465	CDC42SE1	Q9NRR8	79 aa		5.1	□□□□□ -1.59
CACNB3-222	ENST00000552465		A6NED7	52 aa		5.09	□□□□□ -1.59
CACNB3-222	ENST00000552465	KRTAP6-1	Q3LI64	71 aa		5.07	□□□□□ -1.6
CACNB3-222	ENST00000552465	MT1A	P04731	61 aa		5.06	□□□□□ -1.6
CACNB3-222	ENST00000552465	KTN1-AS1	Q86SY8	53 aa		5.03	□□□□□ -1.6
CACNB3-222	ENST00000552465	KRTAP9-9	Q9BYP9	154 aa		5.03	□□□□□ -1.6
CACNB3-222	ENST00000552465	LCE3C	Q5T5A8	94 aa		4.98	□□□□□ -1.61
CACNB3-222	ENST00000552465	KRTAP9-4	Q9BYQ2	154 aa		4.96	□□□□□ -1.62
CACNB3-222	ENST00000552465	KRTAP25-1	Q3LHN0	102 aa		4.95	□□□□□ -1.62
CACNB3-222	ENST00000552465	KRTAP6-2	Q3LI66	62 aa		4.94	□□□□□ -1.62
CACNB3-222	ENST00000552465	KRTAP15-1	Q3LI76	137 aa		4.92	□□□□□ -1.62
CACNB3-222	ENST00000552465	UQCR11	O14957	56 aa		4.91	□□□□□ -1.62
CACNB3-222	ENST00000552465	OBSCN	Q5VST9	7968 aa		4.9	□□□□□ -1.62
CACNB3-222	ENST00000552465	MIR22HG	Q0VDD5	57 aa		4.84	□□□□□ -1.63
CACNB3-222	ENST00000552465	KRTAP5-1	Q6L8H4	278 aa		4.78	□□□□□ -1.64
CACNB3-222	ENST00000552465	KRTAP23-1	A1A580	65 aa		4.75	□□□□□ -1.65
CACNB3-222	ENST00000552465	KRTAP9-6	A8MVA2	160 aa		4.72	□□□□□ -1.65
CACNB3-222	ENST00000552465		K7ERS5	55 aa		4.7	□□□□□ -1.66
CACNB3-222	ENST00000552465	MT3	P25713	68 aa		4.66	□□□□□ -1.66
CACNB3-222	ENST00000552465	PRAC1	Q96KF2	57 aa		4.54	□□□□□ -1.68
CACNB3-222	ENST00000552465	ROMO1	P60602	79 aa		4.44	□□□□□ -1.7
CACNB3-222	ENST00000552465	LCE1E	Q5T753	118 aa		4.4	□□□□□ -1.71
CACNB3-222	ENST00000552465	KRTAP4-2	Q9BYR5	136 aa		4.21	□□□□□ -1.74
CACNB3-222	ENST00000552465	LCE1B	Q5T7P3	118 aa		4.18	□□□□□ -1.74
CACNB3-222	ENST00000552465	LCE1C	Q5T751	118 aa		4.08	□□□□□ -1.76
CACNB3-222	ENST00000552465	KRTAP4-12	Q9BQ66	201 aa		4	□□□□□ -1.77
CACNB3-222	ENST00000552465	NDUFAF8	A1L188	74 aa		3.9	□□□□□ -1.79
CACNB3-222	ENST00000552465	LUZP6	Q538Z0	58 aa		3.87	□□□□□ -1.79
CACNB3-222	ENST00000552465	KRTAP5-11	Q6L8G4	156 aa		3.8	□□□□□ -1.8
CACNB3-222	ENST00000552465	LCE1F	Q5T754	118 aa		3.75	□□□□□ -1.81
CACNB3-222	ENST00000552465	KRTAP5-6	Q6L8G9	129 aa	Predicted RBP	3.65	□□□□□ -1.83
CACNB3-222	ENST00000552465	PHGR1	C9JFL3	82 aa		3.63	□□□□□ -1.83
CACNB3-222	ENST00000552465	LCE3D	Q9BYE3	92 aa		3.48	□□□□□ -1.85
CACNB3-222	ENST00000552465	INE1	O15225	51 aa		3.42	□□□□□ -1.86
CACNB3-222	ENST00000552465	KRTAP21-2	Q3LI59	83 aa		3.35	□□□□□ -1.87
CACNB3-222	ENST00000552465	LCE3E	Q5T5B0	92 aa		3.19	□□□□□ -1.9
CACNB3-222	ENST00000552465	KRTAP4-4	Q9BYR3	166 aa		3.15	□□□□□ -1.91
CACNB3-222	ENST00000552465	MUC19	Q7Z5P9	8384 aa		3.06	□□□□□ -1.92
CACNB3-222	ENST00000552465	KRTAP21-1	Q3LI58	79 aa		2.77	□□□□□ -1.97
CACNB3-222	ENST00000552465	PRM1	P04553	51 aa		2.28	□□□□□ -2.04
CACNB3-222	ENST00000552465	MUC16	Q8WXI7	14507 aa		2.23	□□□□□ -2.05

Retrieved 78 of 20,778 RNA–protein pairs in 93.2 ms