RNA–Protein interactions for RNA: ENST00000552374.6

TMEM116-215, Transcript of transmembrane protein 116, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TMEM116, Length 1,408 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-215ENST00000552374 KRTAP23-1A1A580 65 aa4.06□□□□□ -1.76
TMEM116-215ENST00000552374 MT1EP04732 61 aa4.05□□□□□ -1.76
TMEM116-215ENST00000552374 PRR15LQ9BU68 103 aa4.04□□□□□ -1.76
TMEM116-215ENST00000552374 KRTAP4-9Q9BYQ8 210 aa4.04□□□□□ -1.76
TMEM116-215ENST00000552374 LCE5AQ5TCM9 118 aa4.03□□□□□ -1.76
TMEM116-215ENST00000552374 KRTAP19-5Q3LI72 72 aa4.02□□□□□ -1.77
TMEM116-215ENST00000552374 KRTAP19-3Q7Z4W3 81 aa4.02□□□□□ -1.77
TMEM116-215ENST00000552374 BRK1Q8WUW1 75 aa4.02□□□□□ -1.77
TMEM116-215ENST00000552374 DSTQ03001 7570 aaKnown RBP4.01□□□□□ -1.77
TMEM116-215ENST00000552374 LCE4AQ5TA78 99 aa3.98□□□□□ -1.77
TMEM116-215ENST00000552374 KRTAP4-2Q9BYR5 136 aa3.98□□□□□ -1.77
TMEM116-215ENST00000552374 LINC01558Q9Y6Z2 57 aa3.98□□□□□ -1.77
TMEM116-215ENST00000552374 TNP1P09430 55 aa3.96□□□□□ -1.77
TMEM116-215ENST00000552374 C10orf95Q9H7T3 257 aa3.96□□□□□ -1.77
TMEM116-215ENST00000552374 MT1GP13640 62 aa3.94□□□□□ -1.78
TMEM116-215ENST00000552374 LCE3AQ5TA76 89 aa3.93□□□□□ -1.78
TMEM116-215ENST00000552374 Q1T7F1 81 aa3.92□□□□□ -1.78
TMEM116-215ENST00000552374 PP632Q6XCG6 107 aa3.9□□□□□ -1.78
TMEM116-215ENST00000552374 UQCR11O14957 56 aa3.89□□□□□ -1.79
TMEM116-215ENST00000552374 KRTAP4-11Q9BYQ6 195 aa3.88□□□□□ -1.79
TMEM116-215ENST00000552374 MT1LQ93083 61 aa3.87□□□□□ -1.79
TMEM116-215ENST00000552374 MT1MQ8N339 61 aa3.86□□□□□ -1.79
TMEM116-215ENST00000552374 PRAC1Q96KF2 57 aa3.85□□□□□ -1.79
TMEM116-215ENST00000552374 MIR22HGQ0VDD5 57 aa3.82□□□□□ -1.8
TMEM116-215ENST00000552374 KRTAP4-3Q9BYR4 195 aa3.8□□□□□ -1.8
TMEM116-215ENST00000552374 KRTAP12-3P60328 96 aa3.78□□□□□ -1.8
TMEM116-215ENST00000552374 K7ERS5 55 aa3.75□□□□□ -1.81
TMEM116-215ENST00000552374 KRTAP19-4Q3LI73 84 aa3.74□□□□□ -1.81
TMEM116-215ENST00000552374 MT4P47944 62 aa3.73□□□□□ -1.81
TMEM116-215ENST00000552374 KRTAP25-1Q3LHN0 102 aa3.71□□□□□ -1.82
TMEM116-215ENST00000552374 LUZP6Q538Z0 58 aa3.68□□□□□ -1.82
TMEM116-215ENST00000552374 HMCN1Q96RW7 5635 aa3.67□□□□□ -1.82
TMEM116-215ENST00000552374 A6NED7 52 aa3.66□□□□□ -1.82
TMEM116-215ENST00000552374 GPR98Q8WXG9 6306 aa3.66□□□□□ -1.82
TMEM116-215ENST00000552374 KRTAP5-4Q6L8H1 288 aa3.64□□□□□ -1.83
TMEM116-215ENST00000552374 CDC42SE1Q9NRR8 79 aa3.64□□□□□ -1.83
TMEM116-215ENST00000552374 ROMO1P60602 79 aa3.59□□□□□ -1.84
TMEM116-215ENST00000552374 KRTAP5-3Q6L8H2 238 aa3.55□□□□□ -1.84
TMEM116-215ENST00000552374 KRTAP15-1Q3LI76 137 aa3.53□□□□□ -1.85
TMEM116-215ENST00000552374 AHNAK2Q8IVF2 5795 aa3.52□□□□□ -1.85
TMEM116-215ENST00000552374 KRTAP5-5Q701N2 237 aaPredicted RBP3.51□□□□□ -1.85
TMEM116-215ENST00000552374 KRTAP12-4P60329 112 aa3.47□□□□□ -1.85
TMEM116-215ENST00000552374 LCE3CQ5T5A8 94 aa3.47□□□□□ -1.85
TMEM116-215ENST00000552374 KRTAP20-2Q3LI61 65 aa3.46□□□□□ -1.86
TMEM116-215ENST00000552374 KRTAP5-10Q6L8G5 202 aa3.45□□□□□ -1.86
TMEM116-215ENST00000552374 SYNE1Q8NF91 8797 aaKnown RBP3.45□□□□□ -1.86
TMEM116-215ENST00000552374 SPRR5A0A1B0GTR4 108 aa3.44□□□□□ -1.86
TMEM116-215ENST00000552374 NDUFAF8A1L188 74 aa3.33□□□□□ -1.88
TMEM116-215ENST00000552374 KRTAP5-7Q6L8G8 165 aa3.31□□□□□ -1.88
TMEM116-215ENST00000552374 KRTAP6-1Q3LI64 71 aa3.29□□□□□ -1.88
TMEM116-215ENST00000552374 MT1AP04731 61 aa3.28□□□□□ -1.88
TMEM116-215ENST00000552374 KRTAP9-6A8MVA2 160 aa3.27□□□□□ -1.89
TMEM116-215ENST00000552374 KRTAP5-2Q701N4 177 aa3.19□□□□□ -1.9
TMEM116-215ENST00000552374 KRTAP6-2Q3LI66 62 aa3.15□□□□□ -1.91
TMEM116-215ENST00000552374 OBSCNQ5VST9 7968 aa3.07□□□□□ -1.92
TMEM116-215ENST00000552374 KRTAP5-8O75690 187 aa3.05□□□□□ -1.92
TMEM116-215ENST00000552374 MT3P25713 68 aa3.03□□□□□ -1.92
TMEM116-215ENST00000552374 INE1O15225 51 aa2.91□□□□□ -1.94
TMEM116-215ENST00000552374 MUC5BQ9HC84 5762 aaPredicted RBP2.91□□□□□ -1.94
TMEM116-215ENST00000552374 KRTAP5-1Q6L8H4 278 aa2.87□□□□□ -1.95
TMEM116-215ENST00000552374 AHNAKQ09666 5890 aaKnown RBP2.86□□□□□ -1.95
TMEM116-215ENST00000552374 MUC5ACP98088 5654 aa2.86□□□□□ -1.95
TMEM116-215ENST00000552374 LCE1EQ5T753 118 aa2.76□□□□□ -1.97
TMEM116-215ENST00000552374 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.7□□□□□ -1.98
TMEM116-215ENST00000552374 LCE1BQ5T7P3 118 aa2.66□□□□□ -1.98
TMEM116-215ENST00000552374 KRTAP5-11Q6L8G4 156 aa2.65□□□□□ -1.99
TMEM116-215ENST00000552374 LCE1CQ5T751 118 aa2.57□□□□□ -2
TMEM116-215ENST00000552374 LCE3DQ9BYE3 92 aa2.51□□□□□ -2.01
TMEM116-215ENST00000552374 LCE1FQ5T754 118 aa2.46□□□□□ -2.02
TMEM116-215ENST00000552374 LCE3EQ5T5B0 92 aa2.36□□□□□ -2.03
TMEM116-215ENST00000552374 KRTAP4-4Q9BYR3 166 aa2.24□□□□□ -2.05
TMEM116-215ENST00000552374 KRTAP21-2Q3LI59 83 aa2.16□□□□□ -2.06
TMEM116-215ENST00000552374 PHGR1C9JFL3 82 aa2.03□□□□□ -2.08
TMEM116-215ENST00000552374 MUC19Q7Z5P9 8384 aa1.89□□□□□ -2.11
TMEM116-215ENST00000552374 PRM1P04553 51 aa1.79□□□□□ -2.12
TMEM116-215ENST00000552374 KRTAP21-1Q3LI58 79 aa1.53□□□□□ -2.16
TMEM116-215ENST00000552374 MUC16Q8WXI7 14507 aa1.41□□□□□ -2.18
Retrieved 77 of 20,778 RNA–protein pairs in 292.1 ms